| Chain sequence(s) |
H: QVQLVESGGGLVQPGGSLRLSCAASGFTFNSYWINWVRQAPGKGLEWVSGIAYDSSNTLYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARGLGAFHWDMQPDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
L: SYELTQPPSVSVAPGQTARISCSGDNIGGTFVSWYQQKPGQAPVLVIYDDNDRPSGIPERFSGSNSGNTATLTISGTQAEDEADYYCGTWDMVTNNVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:50)
[INFO] Main: Simulation completed successfully. (00:04:54)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.4938 | |
| 2 | V | H | -0.8162 | |
| 3 | Q | H | -0.9426 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.8170 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.2706 | |
| 8 | G | H | -0.6473 | |
| 9 | G | H | 0.0441 | |
| 10 | G | H | 0.5150 | |
| 11 | L | H | 1.0067 | |
| 12 | V | H | -0.1442 | |
| 13 | Q | H | -1.3742 | |
| 14 | P | H | -1.6318 | |
| 15 | G | H | -1.3783 | |
| 16 | G | H | -1.1149 | |
| 17 | S | H | -1.2641 | |
| 18 | L | H | -1.0747 | |
| 19 | R | H | -2.1296 | |
| 20 | L | H | 0.0000 | |
| 21 | S | H | -0.4142 | |
| 22 | C | H | 0.0000 | |
| 23 | A | H | -0.1867 | |
| 24 | A | H | 0.0000 | |
| 25 | S | H | -0.9272 | |
| 26 | G | H | -1.0429 | |
| 27 | F | H | -0.5619 | |
| 28 | T | H | -0.5596 | |
| 29 | F | H | 0.0000 | |
| 30 | N | H | -1.9340 | |
| 31 | S | H | -0.6448 | |
| 32 | Y | H | -0.0291 | |
| 33 | W | H | 0.0000 | |
| 34 | I | H | 0.0000 | |
| 35 | N | H | 0.0000 | |
| 36 | W | H | 0.0000 | |
| 37 | V | H | 0.0000 | |
| 38 | R | H | 0.0000 | |
| 39 | Q | H | -0.6468 | |
| 40 | A | H | -1.0371 | |
| 41 | P | H | -0.8521 | |
| 42 | G | H | -1.5058 | |
| 43 | K | H | -2.2634 | |
| 44 | G | H | -1.4526 | |
| 45 | L | H | 0.0000 | |
| 46 | E | H | -0.9155 | |
| 47 | W | H | 0.0000 | |
| 48 | V | H | 0.0000 | |
| 49 | S | H | 0.0000 | |
| 50 | G | H | 0.0000 | |
| 51 | I | H | 0.0000 | |
| 52 | A | H | 0.0000 | |
| 53 | Y | H | -0.6816 | |
| 54 | D | H | -1.5181 | |
| 55 | S | H | -1.2800 | |
| 56 | S | H | -0.9659 | |
| 57 | N | H | -1.0813 | |
| 58 | T | H | -0.3033 | |
| 59 | L | H | -0.3075 | |
| 60 | Y | H | -0.7688 | |
| 61 | A | H | -1.3417 | |
| 62 | D | H | -2.4022 | |
| 63 | S | H | -1.7277 | |
| 64 | V | H | 0.0000 | |
| 65 | K | H | -2.5281 | |
| 66 | G | H | -1.7408 | |
| 67 | R | H | -1.2855 | |
| 68 | F | H | 0.0000 | |
| 69 | T | H | -0.8223 | |
| 70 | I | H | 0.0000 | |
| 71 | S | H | -0.4244 | |
| 72 | R | H | -1.2093 | |
| 73 | D | H | -1.7343 | |
| 74 | N | H | -2.1731 | |
| 75 | S | H | -1.8068 | |
| 76 | K | H | -2.5188 | |
| 77 | N | H | -1.9712 | |
| 78 | T | H | -1.1346 | |
| 79 | L | H | 0.0000 | |
| 80 | Y | H | -0.5207 | |
| 81 | L | H | 0.0000 | |
| 82 | Q | H | -1.2937 | |
| 83 | M | H | 0.0000 | |
| 84 | N | H | -1.4985 | |
| 85 | S | H | -1.2761 | |
| 86 | L | H | 0.0000 | |
| 87 | R | H | -2.2926 | |
| 88 | A | H | -1.7523 | |
| 89 | E | H | -2.2147 | |
| 90 | D | H | 0.0000 | |
| 91 | T | H | -0.4524 | |
| 92 | A | H | 0.0000 | |
| 93 | V | H | 0.6299 | |
| 94 | Y | H | 0.0000 | |
| 95 | Y | H | 0.0000 | |
| 96 | C | H | 0.0000 | |
| 97 | A | H | 0.0000 | |
| 98 | R | H | 0.0000 | |
| 99 | G | H | 0.0000 | |
| 100 | L | H | 0.5145 | |
| 101 | G | H | 0.4490 | |
| 102 | A | H | 0.3717 | |
| 103 | F | H | 0.8765 | |
| 104 | H | H | 0.7193 | |
| 105 | W | H | 1.5508 | |
| 106 | D | H | 0.6929 | |
| 107 | M | H | 0.0000 | |
| 108 | Q | H | 0.0000 | |
| 109 | P | H | 0.0000 | |
| 110 | D | H | 0.6787 | |
| 111 | Y | H | 1.0978 | |
| 112 | W | H | 0.4508 | |
| 113 | G | H | 0.0000 | |
| 114 | Q | H | -1.1433 | |
| 115 | G | H | 0.0000 | |
| 116 | T | H | 0.4769 | |
| 117 | L | H | 1.3310 | |
| 118 | V | H | 0.0000 | |
| 119 | T | H | 0.2001 | |
| 120 | V | H | 0.0000 | |
| 121 | S | H | -0.8277 | |
| 122 | S | H | -0.7901 | |
| 123 | A | H | -0.5386 | |
| 124 | S | H | -0.6196 | |
| 125 | T | H | -0.6452 | |
| 126 | K | H | -1.0512 | |
| 127 | G | H | -1.3518 | |
| 128 | P | H | 0.0000 | |
| 129 | S | H | -0.2193 | |
| 130 | V | H | 0.0000 | |
| 131 | F | H | 0.0000 | |
| 132 | P | H | -1.0069 | |
| 133 | L | H | 0.0000 | |
| 134 | A | H | -0.8771 | |
| 135 | P | H | 0.0000 | |
| 136 | S | H | -0.9975 | |
| 137 | S | H | -1.2328 | |
| 138 | K | H | -2.0758 | |
| 139 | S | H | -1.3028 | |
| 140 | T | H | -1.0124 | |
| 141 | S | H | -0.8355 | |
| 142 | G | H | -0.8141 | |
| 143 | G | H | -0.8535 | |
| 144 | T | H | -0.7020 | |
| 145 | A | H | -0.7031 | |
| 146 | A | H | -0.3863 | |
| 147 | L | H | 0.0000 | |
| 148 | G | H | 0.0000 | |
| 149 | C | H | 0.0000 | |
| 150 | L | H | 0.0000 | |
| 151 | V | H | 0.0000 | |
| 152 | K | H | 0.0000 | |
| 153 | D | H | -0.3162 | |
| 154 | Y | H | 0.0000 | |
| 155 | F | H | 0.0000 | |
| 156 | P | H | -0.6452 | |
| 157 | E | H | -0.7985 | |
| 158 | P | H | -0.9504 | |
| 159 | V | H | -0.8577 | |
| 160 | T | H | -0.7513 | |
| 161 | V | H | -0.4683 | |
| 162 | S | H | -0.4089 | |
| 163 | W | H | 0.0000 | |
| 164 | N | H | -0.7526 | |
| 165 | S | H | -0.6507 | |
| 166 | G | H | -0.4749 | |
| 167 | A | H | -0.1921 | |
| 168 | L | H | 0.0674 | |
| 169 | T | H | -0.1529 | |
| 170 | S | H | -0.2215 | |
| 171 | G | H | -0.2524 | |
| 172 | V | H | 0.1945 | |
| 173 | H | H | -0.1335 | |
| 174 | T | H | -0.0193 | |
| 175 | F | H | 0.0000 | |
| 176 | P | H | -0.0365 | |
| 177 | A | H | 0.2192 | |
| 178 | V | H | 0.0000 | |
| 179 | L | H | 1.1448 | |
| 180 | Q | H | 0.2878 | |
| 181 | S | H | -0.1088 | |
| 182 | S | H | -0.1716 | |
| 183 | G | H | 0.0602 | |
| 184 | L | H | 0.0786 | |
| 185 | Y | H | 0.3289 | |
| 186 | S | H | 0.0000 | |
| 187 | L | H | 0.0000 | |
| 188 | S | H | 0.0000 | |
| 189 | S | H | 0.0000 | |
| 190 | V | H | 0.1501 | |
| 191 | V | H | 0.0000 | |
| 192 | T | H | -0.1588 | |
| 193 | V | H | 0.0000 | |
| 194 | P | H | -0.5804 | |
| 195 | S | H | -0.5641 | |
| 196 | S | H | -0.6682 | |
| 197 | S | H | -0.6414 | |
| 198 | L | H | -0.7931 | |
| 199 | G | H | -1.1830 | |
| 200 | T | H | -0.7941 | |
| 201 | Q | H | -1.4853 | |
| 202 | T | H | -1.1759 | |
| 203 | Y | H | 0.0000 | |
| 204 | I | H | -1.0619 | |
| 205 | C | H | 0.0000 | |
| 206 | N | H | -1.5941 | |
| 207 | V | H | 0.0000 | |
| 208 | N | H | -2.3026 | |
| 209 | H | H | 0.0000 | |
| 210 | K | H | -2.8540 | |
| 211 | P | H | -1.7324 | |
| 212 | S | H | -1.8412 | |
| 213 | N | H | -2.6249 | |
| 214 | T | H | -2.1810 | |
| 215 | K | H | -2.8096 | |
| 216 | V | H | -1.5740 | |
| 217 | D | H | -2.5501 | |
| 218 | K | H | -1.9098 | |
| 219 | K | H | -2.2709 | |
| 220 | V | H | 0.0000 | |
| 221 | E | H | -2.4582 | |
| 222 | P | H | -1.2048 | |
| 1 | S | L | -0.3925 | |
| 2 | Y | L | -0.9805 | |
| 3 | E | L | -2.1093 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -0.7603 | |
| 6 | Q | L | -0.6769 | |
| 7 | P | L | -0.5048 | |
| 8 | P | L | -0.7217 | |
| 9 | S | L | -0.6329 | |
| 10 | V | L | -0.5660 | |
| 11 | S | L | -0.3677 | |
| 12 | V | L | 0.0000 | |
| 13 | A | L | -0.3761 | |
| 14 | P | L | -0.9085 | |
| 15 | G | L | -1.5389 | |
| 16 | Q | L | -1.9790 | |
| 17 | T | L | -1.5425 | |
| 18 | A | L | 0.0000 | |
| 19 | R | L | -2.0220 | |
| 20 | I | L | 0.0000 | |
| 21 | S | L | -0.7845 | |
| 22 | C | L | 0.0000 | |
| 23 | S | L | -1.5521 | |
| 24 | G | L | -2.3308 | |
| 25 | D | L | -3.3137 | |
| 26 | N | L | -3.0341 | |
| 27 | I | L | 0.0000 | |
| 28 | G | L | -1.5663 | |
| 29 | G | L | -1.0707 | |
| 30 | T | L | 0.1485 | |
| 31 | F | L | 1.3703 | |
| 32 | V | L | 0.0000 | |
| 33 | S | L | 0.0000 | |
| 34 | W | L | 0.0000 | |
| 35 | Y | L | 0.0000 | |
| 36 | Q | L | -0.1586 | |
| 37 | Q | L | -0.7285 | |
| 38 | K | L | -1.4634 | |
| 39 | P | L | -1.4741 | |
| 40 | G | L | -1.4680 | |
| 41 | Q | L | -1.7490 | |
| 42 | A | L | -0.7007 | |
| 43 | P | L | 0.0000 | |
| 44 | V | L | 1.4854 | |
| 45 | L | L | 0.0000 | |
| 46 | V | L | 0.0000 | |
| 47 | I | L | 0.0000 | |
| 48 | Y | L | -0.7442 | |
| 49 | D | L | -0.7936 | |
| 50 | D | L | -1.1171 | |
| 51 | N | L | -2.1793 | |
| 52 | D | L | -2.3911 | |
| 53 | R | L | -2.0364 | |
| 54 | P | L | -0.7672 | |
| 55 | S | L | -0.8956 | |
| 56 | G | L | -0.8026 | |
| 57 | I | L | -0.5864 | |
| 58 | P | L | -1.2410 | |
| 59 | E | L | -2.2564 | |
| 60 | R | L | -1.5659 | |
| 61 | F | L | 0.0000 | |
| 62 | S | L | -1.5743 | |
| 63 | G | L | -1.4901 | |
| 64 | S | L | -1.1292 | |
| 65 | N | L | -1.0950 | |
| 66 | S | L | -1.3073 | |
| 67 | G | L | -2.1129 | |
| 68 | N | L | -2.7989 | |
| 69 | T | L | -1.5387 | |
| 70 | A | L | 0.0000 | |
| 71 | T | L | -0.8892 | |
| 72 | L | L | 0.0000 | |
| 73 | T | L | -1.0025 | |
| 74 | I | L | 0.0000 | |
| 75 | S | L | -1.5400 | |
| 76 | G | L | -1.4057 | |
| 77 | T | L | 0.0000 | |
| 78 | Q | L | -1.7676 | |
| 79 | A | L | -1.2360 | |
| 80 | E | L | -2.1937 | |
| 81 | D | L | 0.0000 | |
| 82 | E | L | -1.4270 | |
| 83 | A | L | 0.0000 | |
| 84 | D | L | -1.1641 | |
| 85 | Y | L | 0.0000 | |
| 86 | Y | L | 0.0000 | |
| 87 | C | L | 0.0000 | |
| 88 | G | L | 0.0000 | |
| 89 | T | L | 0.0000 | |
| 90 | W | L | 1.1335 | |
| 91 | D | L | 1.2727 | |
| 92 | M | L | 1.9179 | |
| 93 | V | L | 2.1853 | |
| 94 | T | L | 0.6427 | |
| 95 | N | L | 0.9584 | |
| 96 | N | L | 0.0000 | |
| 97 | V | L | -0.0865 | |
| 98 | F | L | -0.3050 | |
| 99 | G | L | 0.0000 | |
| 100 | G | L | -1.2536 | |
| 101 | G | L | 0.0000 | |
| 102 | T | L | 0.0000 | |
| 103 | K | L | -1.2703 | |
| 104 | L | L | 0.0000 | |
| 105 | T | L | -0.3186 | |
| 106 | V | L | 0.0000 | |
| 107 | L | L | 0.7972 | |
| 108 | G | L | -0.4808 | |
| 109 | Q | L | -1.1651 | |
| 110 | P | L | -1.1985 | |
| 111 | K | L | -2.0654 | |
| 112 | A | L | -1.2771 | |
| 113 | A | L | -0.8062 | |
| 114 | P | L | 0.0000 | |
| 115 | S | L | -0.3926 | |
| 116 | V | L | 0.0000 | |
| 117 | T | L | -0.5921 | |
| 118 | L | L | 0.0000 | |
| 119 | F | L | 0.0000 | |
| 120 | P | L | -0.1388 | |
| 121 | P | L | 0.0000 | |
| 122 | S | L | -0.9778 | |
| 123 | S | L | -1.5370 | |
| 124 | E | L | -2.4430 | |
| 125 | E | L | 0.0000 | |
| 126 | L | L | -1.9277 | |
| 127 | Q | L | -2.3107 | |
| 128 | A | L | -1.8668 | |
| 129 | N | L | -2.6009 | |
| 130 | K | L | -2.5150 | |
| 131 | A | L | 0.0000 | |
| 132 | T | L | 0.0000 | |
| 133 | L | L | 0.0000 | |
| 134 | V | L | 0.0000 | |
| 135 | C | L | 0.0000 | |
| 136 | L | L | 0.0000 | |
| 137 | I | L | 0.0000 | |
| 138 | S | L | -0.6221 | |
| 139 | D | L | -1.3385 | |
| 140 | F | L | 0.0000 | |
| 141 | Y | L | -1.5151 | |
| 142 | P | L | -1.2135 | |
| 143 | G | L | -1.0201 | |
| 144 | A | L | -0.2844 | |
| 145 | V | L | -0.1477 | |
| 146 | T | L | -0.1055 | |
| 147 | V | L | 0.1479 | |
| 148 | A | L | -0.3816 | |
| 149 | W | L | 0.0000 | |
| 150 | K | L | -1.2721 | |
| 151 | A | L | 0.0000 | |
| 152 | D | L | -2.1378 | |
| 153 | S | L | -1.1198 | |
| 154 | S | L | -0.9146 | |
| 155 | P | L | -0.9719 | |
| 156 | V | L | -0.8839 | |
| 157 | K | L | -1.6184 | |
| 158 | A | L | -0.7773 | |
| 159 | G | L | -0.6053 | |
| 160 | V | L | -0.3485 | |
| 161 | E | L | -0.3510 | |
| 162 | T | L | 0.0374 | |
| 163 | T | L | 0.0189 | |
| 164 | T | L | -0.2185 | |
| 165 | P | L | -0.6034 | |
| 166 | S | L | -1.2188 | |
| 167 | K | L | -2.5291 | |
| 168 | Q | L | -2.1102 | |
| 169 | S | L | -1.7925 | |
| 170 | N | L | -2.4217 | |
| 171 | N | L | -2.7738 | |
| 172 | K | L | -2.3435 | |
| 173 | Y | L | -1.4365 | |
| 174 | A | L | 0.0000 | |
| 175 | A | L | 0.0000 | |
| 176 | S | L | 0.0000 | |
| 177 | S | L | 0.0000 | |
| 178 | Y | L | 0.0000 | |
| 179 | L | L | 0.0000 | |
| 180 | S | L | -0.5024 | |
| 181 | L | L | 0.0000 | |
| 182 | T | L | -1.7974 | |
| 183 | P | L | -2.2913 | |
| 184 | E | L | -3.0274 | |
| 185 | Q | L | -2.5813 | |
| 186 | W | L | 0.0000 | |
| 187 | K | L | -2.6940 | |
| 188 | S | L | -2.2677 | |
| 189 | H | L | -2.6029 | |
| 190 | R | L | -2.7463 | |
| 191 | S | L | -1.7295 | |
| 192 | Y | L | 0.0000 | |
| 193 | S | L | 0.0000 | |
| 194 | C | L | 0.0000 | |
| 195 | Q | L | -0.7968 | |
| 196 | V | L | 0.0000 | |
| 197 | T | L | -0.6189 | |
| 198 | H | L | 0.0000 | |
| 199 | E | L | -2.2733 | |
| 200 | G | L | -1.4521 | |
| 201 | S | L | -0.8150 | |
| 202 | T | L | -0.5896 | |
| 203 | V | L | -0.4018 | |
| 204 | E | L | -1.4986 | |
| 205 | K | L | -1.3388 | |
| 206 | T | L | -0.8158 | |
| 207 | V | L | -0.2572 | |
| 208 | A | L | -0.8384 | |
| 209 | P | L | -0.8902 | |
| 210 | T | L | -0.4719 |