Project name: f021298c66a0281

Status: done

Started: 2026-01-20 04:11:12
Settings
Chain sequence(s) H: QVQLVESGGGLVQPGGSLRLSCAASGFTFNSYWINWVRQAPGKGLEWVSGIAYDSSNTLYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARGLGAFHWDMQPDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
L: SYELTQPPSVSVAPGQTARISCSGDNIGGTFVSWYQQKPGQAPVLVIYDDNDRPSGIPERFSGSNSGNTATLTISGTQAEDEADYYCGTWDMVTNNVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:04:50)
[INFO]       Main:     Simulation completed successfully.                                          (00:04:54)
Show buried residues

Minimal score value
-3.3137
Maximal score value
2.1853
Average score
-0.6736
Total score value
-291.006

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.4938
2 V H -0.8162
3 Q H -0.9426
4 L H 0.0000
5 V H 0.8170
6 E H 0.0000
7 S H -0.2706
8 G H -0.6473
9 G H 0.0441
10 G H 0.5150
11 L H 1.0067
12 V H -0.1442
13 Q H -1.3742
14 P H -1.6318
15 G H -1.3783
16 G H -1.1149
17 S H -1.2641
18 L H -1.0747
19 R H -2.1296
20 L H 0.0000
21 S H -0.4142
22 C H 0.0000
23 A H -0.1867
24 A H 0.0000
25 S H -0.9272
26 G H -1.0429
27 F H -0.5619
28 T H -0.5596
29 F H 0.0000
30 N H -1.9340
31 S H -0.6448
32 Y H -0.0291
33 W H 0.0000
34 I H 0.0000
35 N H 0.0000
36 W H 0.0000
37 V H 0.0000
38 R H 0.0000
39 Q H -0.6468
40 A H -1.0371
41 P H -0.8521
42 G H -1.5058
43 K H -2.2634
44 G H -1.4526
45 L H 0.0000
46 E H -0.9155
47 W H 0.0000
48 V H 0.0000
49 S H 0.0000
50 G H 0.0000
51 I H 0.0000
52 A H 0.0000
53 Y H -0.6816
54 D H -1.5181
55 S H -1.2800
56 S H -0.9659
57 N H -1.0813
58 T H -0.3033
59 L H -0.3075
60 Y H -0.7688
61 A H -1.3417
62 D H -2.4022
63 S H -1.7277
64 V H 0.0000
65 K H -2.5281
66 G H -1.7408
67 R H -1.2855
68 F H 0.0000
69 T H -0.8223
70 I H 0.0000
71 S H -0.4244
72 R H -1.2093
73 D H -1.7343
74 N H -2.1731
75 S H -1.8068
76 K H -2.5188
77 N H -1.9712
78 T H -1.1346
79 L H 0.0000
80 Y H -0.5207
81 L H 0.0000
82 Q H -1.2937
83 M H 0.0000
84 N H -1.4985
85 S H -1.2761
86 L H 0.0000
87 R H -2.2926
88 A H -1.7523
89 E H -2.2147
90 D H 0.0000
91 T H -0.4524
92 A H 0.0000
93 V H 0.6299
94 Y H 0.0000
95 Y H 0.0000
96 C H 0.0000
97 A H 0.0000
98 R H 0.0000
99 G H 0.0000
100 L H 0.5145
101 G H 0.4490
102 A H 0.3717
103 F H 0.8765
104 H H 0.7193
105 W H 1.5508
106 D H 0.6929
107 M H 0.0000
108 Q H 0.0000
109 P H 0.0000
110 D H 0.6787
111 Y H 1.0978
112 W H 0.4508
113 G H 0.0000
114 Q H -1.1433
115 G H 0.0000
116 T H 0.4769
117 L H 1.3310
118 V H 0.0000
119 T H 0.2001
120 V H 0.0000
121 S H -0.8277
122 S H -0.7901
123 A H -0.5386
124 S H -0.6196
125 T H -0.6452
126 K H -1.0512
127 G H -1.3518
128 P H 0.0000
129 S H -0.2193
130 V H 0.0000
131 F H 0.0000
132 P H -1.0069
133 L H 0.0000
134 A H -0.8771
135 P H 0.0000
136 S H -0.9975
137 S H -1.2328
138 K H -2.0758
139 S H -1.3028
140 T H -1.0124
141 S H -0.8355
142 G H -0.8141
143 G H -0.8535
144 T H -0.7020
145 A H -0.7031
146 A H -0.3863
147 L H 0.0000
148 G H 0.0000
149 C H 0.0000
150 L H 0.0000
151 V H 0.0000
152 K H 0.0000
153 D H -0.3162
154 Y H 0.0000
155 F H 0.0000
156 P H -0.6452
157 E H -0.7985
158 P H -0.9504
159 V H -0.8577
160 T H -0.7513
161 V H -0.4683
162 S H -0.4089
163 W H 0.0000
164 N H -0.7526
165 S H -0.6507
166 G H -0.4749
167 A H -0.1921
168 L H 0.0674
169 T H -0.1529
170 S H -0.2215
171 G H -0.2524
172 V H 0.1945
173 H H -0.1335
174 T H -0.0193
175 F H 0.0000
176 P H -0.0365
177 A H 0.2192
178 V H 0.0000
179 L H 1.1448
180 Q H 0.2878
181 S H -0.1088
182 S H -0.1716
183 G H 0.0602
184 L H 0.0786
185 Y H 0.3289
186 S H 0.0000
187 L H 0.0000
188 S H 0.0000
189 S H 0.0000
190 V H 0.1501
191 V H 0.0000
192 T H -0.1588
193 V H 0.0000
194 P H -0.5804
195 S H -0.5641
196 S H -0.6682
197 S H -0.6414
198 L H -0.7931
199 G H -1.1830
200 T H -0.7941
201 Q H -1.4853
202 T H -1.1759
203 Y H 0.0000
204 I H -1.0619
205 C H 0.0000
206 N H -1.5941
207 V H 0.0000
208 N H -2.3026
209 H H 0.0000
210 K H -2.8540
211 P H -1.7324
212 S H -1.8412
213 N H -2.6249
214 T H -2.1810
215 K H -2.8096
216 V H -1.5740
217 D H -2.5501
218 K H -1.9098
219 K H -2.2709
220 V H 0.0000
221 E H -2.4582
222 P H -1.2048
1 S L -0.3925
2 Y L -0.9805
3 E L -2.1093
4 L L 0.0000
5 T L -0.7603
6 Q L -0.6769
7 P L -0.5048
8 P L -0.7217
9 S L -0.6329
10 V L -0.5660
11 S L -0.3677
12 V L 0.0000
13 A L -0.3761
14 P L -0.9085
15 G L -1.5389
16 Q L -1.9790
17 T L -1.5425
18 A L 0.0000
19 R L -2.0220
20 I L 0.0000
21 S L -0.7845
22 C L 0.0000
23 S L -1.5521
24 G L -2.3308
25 D L -3.3137
26 N L -3.0341
27 I L 0.0000
28 G L -1.5663
29 G L -1.0707
30 T L 0.1485
31 F L 1.3703
32 V L 0.0000
33 S L 0.0000
34 W L 0.0000
35 Y L 0.0000
36 Q L -0.1586
37 Q L -0.7285
38 K L -1.4634
39 P L -1.4741
40 G L -1.4680
41 Q L -1.7490
42 A L -0.7007
43 P L 0.0000
44 V L 1.4854
45 L L 0.0000
46 V L 0.0000
47 I L 0.0000
48 Y L -0.7442
49 D L -0.7936
50 D L -1.1171
51 N L -2.1793
52 D L -2.3911
53 R L -2.0364
54 P L -0.7672
55 S L -0.8956
56 G L -0.8026
57 I L -0.5864
58 P L -1.2410
59 E L -2.2564
60 R L -1.5659
61 F L 0.0000
62 S L -1.5743
63 G L -1.4901
64 S L -1.1292
65 N L -1.0950
66 S L -1.3073
67 G L -2.1129
68 N L -2.7989
69 T L -1.5387
70 A L 0.0000
71 T L -0.8892
72 L L 0.0000
73 T L -1.0025
74 I L 0.0000
75 S L -1.5400
76 G L -1.4057
77 T L 0.0000
78 Q L -1.7676
79 A L -1.2360
80 E L -2.1937
81 D L 0.0000
82 E L -1.4270
83 A L 0.0000
84 D L -1.1641
85 Y L 0.0000
86 Y L 0.0000
87 C L 0.0000
88 G L 0.0000
89 T L 0.0000
90 W L 1.1335
91 D L 1.2727
92 M L 1.9179
93 V L 2.1853
94 T L 0.6427
95 N L 0.9584
96 N L 0.0000
97 V L -0.0865
98 F L -0.3050
99 G L 0.0000
100 G L -1.2536
101 G L 0.0000
102 T L 0.0000
103 K L -1.2703
104 L L 0.0000
105 T L -0.3186
106 V L 0.0000
107 L L 0.7972
108 G L -0.4808
109 Q L -1.1651
110 P L -1.1985
111 K L -2.0654
112 A L -1.2771
113 A L -0.8062
114 P L 0.0000
115 S L -0.3926
116 V L 0.0000
117 T L -0.5921
118 L L 0.0000
119 F L 0.0000
120 P L -0.1388
121 P L 0.0000
122 S L -0.9778
123 S L -1.5370
124 E L -2.4430
125 E L 0.0000
126 L L -1.9277
127 Q L -2.3107
128 A L -1.8668
129 N L -2.6009
130 K L -2.5150
131 A L 0.0000
132 T L 0.0000
133 L L 0.0000
134 V L 0.0000
135 C L 0.0000
136 L L 0.0000
137 I L 0.0000
138 S L -0.6221
139 D L -1.3385
140 F L 0.0000
141 Y L -1.5151
142 P L -1.2135
143 G L -1.0201
144 A L -0.2844
145 V L -0.1477
146 T L -0.1055
147 V L 0.1479
148 A L -0.3816
149 W L 0.0000
150 K L -1.2721
151 A L 0.0000
152 D L -2.1378
153 S L -1.1198
154 S L -0.9146
155 P L -0.9719
156 V L -0.8839
157 K L -1.6184
158 A L -0.7773
159 G L -0.6053
160 V L -0.3485
161 E L -0.3510
162 T L 0.0374
163 T L 0.0189
164 T L -0.2185
165 P L -0.6034
166 S L -1.2188
167 K L -2.5291
168 Q L -2.1102
169 S L -1.7925
170 N L -2.4217
171 N L -2.7738
172 K L -2.3435
173 Y L -1.4365
174 A L 0.0000
175 A L 0.0000
176 S L 0.0000
177 S L 0.0000
178 Y L 0.0000
179 L L 0.0000
180 S L -0.5024
181 L L 0.0000
182 T L -1.7974
183 P L -2.2913
184 E L -3.0274
185 Q L -2.5813
186 W L 0.0000
187 K L -2.6940
188 S L -2.2677
189 H L -2.6029
190 R L -2.7463
191 S L -1.7295
192 Y L 0.0000
193 S L 0.0000
194 C L 0.0000
195 Q L -0.7968
196 V L 0.0000
197 T L -0.6189
198 H L 0.0000
199 E L -2.2733
200 G L -1.4521
201 S L -0.8150
202 T L -0.5896
203 V L -0.4018
204 E L -1.4986
205 K L -1.3388
206 T L -0.8158
207 V L -0.2572
208 A L -0.8384
209 P L -0.8902
210 T L -0.4719
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Laboratory of Theory of Biopolymers 2018