| Chain sequence(s) |
A: AEGYQYRALYDYKKEREEDIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYNETTGERGDFPGTYVEYIGRKKISPP
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:44)
[INFO] Main: Simulation completed successfully. (00:00:44)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 3 | A | A | -0.9584 | |
| 4 | E | A | -2.3176 | |
| 5 | G | A | 0.0000 | |
| 6 | Y | A | 0.0000 | |
| 7 | Q | A | 0.0000 | |
| 8 | Y | A | 0.0000 | |
| 9 | R | A | -1.0033 | |
| 10 | A | A | 0.0000 | |
| 11 | L | A | 0.7033 | |
| 12 | Y | A | 1.1130 | |
| 13 | D | A | -1.1709 | |
| 14 | Y | A | -1.6257 | |
| 15 | K | A | -3.3235 | |
| 16 | K | A | -4.1252 | |
| 17 | E | A | -4.2925 | |
| 18 | R | A | -4.6359 | |
| 19 | E | A | -4.2347 | |
| 20 | E | A | -4.1069 | |
| 21 | D | A | 0.0000 | |
| 22 | I | A | 0.0000 | |
| 23 | D | A | -2.5108 | |
| 24 | L | A | 0.0000 | |
| 25 | H | A | -0.5277 | |
| 26 | L | A | 1.1903 | |
| 27 | G | A | 0.2909 | |
| 28 | D | A | 0.0000 | |
| 29 | I | A | -0.4699 | |
| 30 | L | A | 0.0000 | |
| 31 | T | A | -1.1999 | |
| 32 | V | A | 0.0000 | |
| 33 | N | A | -1.7619 | |
| 34 | K | A | -1.7602 | |
| 35 | G | A | -0.5627 | |
| 36 | S | A | -0.1191 | |
| 37 | L | A | 0.0000 | |
| 38 | V | A | 1.6219 | |
| 39 | A | A | 1.2923 | |
| 40 | L | A | 1.9880 | |
| 41 | G | A | 0.8081 | |
| 42 | F | A | 0.3983 | |
| 43 | S | A | -0.5808 | |
| 44 | D | A | -2.1456 | |
| 45 | G | A | -1.7325 | |
| 46 | Q | A | -2.2612 | |
| 47 | E | A | -2.0848 | |
| 48 | A | A | -1.9754 | |
| 49 | R | A | -3.4204 | |
| 50 | P | A | 0.0000 | |
| 51 | E | A | -3.1116 | |
| 52 | E | A | -3.1392 | |
| 53 | I | A | -1.4477 | |
| 54 | G | A | -0.9948 | |
| 55 | W | A | -0.0695 | |
| 56 | L | A | 0.0000 | |
| 57 | N | A | -1.0236 | |
| 58 | G | A | 0.0000 | |
| 59 | Y | A | -1.1329 | |
| 60 | N | A | 0.0000 | |
| 61 | E | A | -2.1373 | |
| 62 | T | A | -1.1457 | |
| 63 | T | A | -1.5016 | |
| 64 | G | A | -2.0246 | |
| 65 | E | A | -3.0269 | |
| 66 | R | A | -3.0705 | |
| 67 | G | A | 0.0000 | |
| 68 | D | A | -2.1208 | |
| 69 | F | A | 0.0000 | |
| 70 | P | A | 0.0000 | |
| 71 | G | A | 0.0000 | |
| 72 | T | A | -1.0319 | |
| 73 | Y | A | 0.0298 | |
| 74 | V | A | 0.0000 | |
| 75 | E | A | -2.0347 | |
| 76 | Y | A | -0.9824 | |
| 77 | I | A | 0.4803 | |
| 78 | G | A | -0.7390 | |
| 79 | R | A | -2.6146 | |
| 80 | K | A | -2.7440 | |
| 81 | K | A | -2.3907 | |
| 82 | I | A | -0.6727 | |
| 83 | S | A | -0.4567 | |
| 84 | P | A | -0.2212 | |
| 85 | P | A | -0.2969 |