| Chain sequence(s) |
A: MNDPNSCVDNATVCSGASCVVPESNFNNILSVVLSTVLTILLALVMFSMGCNVEIKKFLGHIKRPWGICVGFLCQFGIMPLTGFILSVAFDILPLQAVVVLIIGCCPGGTASNILAYWVDGDMDLSVSMTTCSTLLALGMMPLCLLIYTKMWVDSGSIVIPYDNIGTSLVSLVVPVSIGMFVNHKWPQKAKIILKIGSIAGAILIVLIAVVGGILYQSAWIIAPKLWIIGTIFPVAGYSLGFLLARIAGLPWYRCRTVAFETGMQNTQLCSTIVQLSFTPEELNVVFTFPLIYSIFQLAFAAIFLGFYVAYKKCHGKNKAEIPESKENGTEPESSFYKANGGFQPDEK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:33)
[INFO] Main: Simulation completed successfully. (00:03:35)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | -0.0500 | |
| 2 | N | A | -1.9066 | |
| 3 | D | A | -2.7286 | |
| 4 | P | A | -1.9914 | |
| 5 | N | A | -1.9959 | |
| 6 | S | A | -1.1507 | |
| 7 | C | A | 0.1258 | |
| 8 | V | A | 0.5677 | |
| 9 | D | A | -1.4953 | |
| 10 | N | A | -1.2384 | |
| 11 | A | A | 0.1937 | |
| 12 | T | A | 0.6359 | |
| 13 | V | A | 1.7566 | |
| 14 | C | A | 1.2528 | |
| 15 | S | A | 0.2669 | |
| 16 | G | A | -0.3093 | |
| 17 | A | A | 0.0328 | |
| 18 | S | A | 1.2103 | |
| 19 | C | A | 1.9198 | |
| 20 | V | A | 2.4478 | |
| 21 | V | A | 2.1063 | |
| 22 | P | A | 0.0794 | |
| 23 | E | A | -1.4743 | |
| 24 | S | A | -0.7109 | |
| 25 | N | A | -1.1735 | |
| 26 | F | A | 0.8834 | |
| 27 | N | A | -0.4243 | |
| 28 | N | A | -0.0264 | |
| 29 | I | A | 2.1832 | |
| 30 | L | A | 1.8158 | |
| 31 | S | A | 1.5570 | |
| 32 | V | A | 2.9215 | |
| 33 | V | A | 2.6716 | |
| 34 | L | A | 2.0995 | |
| 35 | S | A | 1.9019 | |
| 36 | T | A | 1.9388 | |
| 37 | V | A | 2.1909 | |
| 38 | L | A | 0.0000 | |
| 39 | T | A | 1.6065 | |
| 40 | I | A | 2.6348 | |
| 41 | L | A | 2.0677 | |
| 42 | L | A | 0.0000 | |
| 43 | A | A | 1.6164 | |
| 44 | L | A | 1.7115 | |
| 45 | V | A | 0.0000 | |
| 46 | M | A | 0.0000 | |
| 47 | F | A | 1.1246 | |
| 48 | S | A | 0.0000 | |
| 49 | M | A | 0.0000 | |
| 50 | G | A | 0.0000 | |
| 51 | C | A | 0.0000 | |
| 52 | N | A | -1.0796 | |
| 53 | V | A | 0.0000 | |
| 54 | E | A | -1.4939 | |
| 55 | I | A | -1.0913 | |
| 56 | K | A | -2.2982 | |
| 57 | K | A | -2.4507 | |
| 58 | F | A | 0.0000 | |
| 59 | L | A | -0.9033 | |
| 60 | G | A | -1.8678 | |
| 61 | H | A | -1.3102 | |
| 62 | I | A | -0.6336 | |
| 63 | K | A | -2.1771 | |
| 64 | R | A | -2.0512 | |
| 65 | P | A | -0.3322 | |
| 66 | W | A | 0.7561 | |
| 67 | G | A | 0.0000 | |
| 68 | I | A | 0.8572 | |
| 69 | C | A | 1.4865 | |
| 70 | V | A | 0.0000 | |
| 71 | G | A | 0.0000 | |
| 72 | F | A | 1.8760 | |
| 73 | L | A | 1.8305 | |
| 74 | C | A | 0.0000 | |
| 75 | Q | A | 0.0000 | |
| 76 | F | A | 0.0000 | |
| 77 | G | A | 0.8983 | |
| 78 | I | A | 1.1056 | |
| 79 | M | A | 0.0000 | |
| 80 | P | A | 0.0000 | |
| 81 | L | A | 1.6555 | |
| 82 | T | A | 1.4614 | |
| 83 | G | A | 0.0000 | |
| 84 | F | A | 1.7997 | |
| 85 | I | A | 2.3024 | |
| 86 | L | A | 0.0000 | |
| 87 | S | A | 0.0000 | |
| 88 | V | A | 1.2848 | |
| 89 | A | A | 0.6128 | |
| 90 | F | A | 0.1895 | |
| 91 | D | A | -0.9710 | |
| 92 | I | A | 0.0000 | |
| 93 | L | A | 0.8148 | |
| 94 | P | A | 0.4587 | |
| 95 | L | A | 0.6914 | |
| 96 | Q | A | 0.1707 | |
| 97 | A | A | 0.0000 | |
| 98 | V | A | 0.0000 | |
| 99 | V | A | 0.0000 | |
| 100 | V | A | 0.0000 | |
| 101 | L | A | 0.0000 | |
| 102 | I | A | 0.0000 | |
| 103 | I | A | 0.0000 | |
| 104 | G | A | 0.0000 | |
| 105 | C | A | 0.0000 | |
| 106 | C | A | 0.0000 | |
| 107 | P | A | 0.0000 | |
| 108 | G | A | 0.0000 | |
| 109 | G | A | 0.0000 | |
| 110 | T | A | 0.1849 | |
| 111 | A | A | 0.4915 | |
| 112 | S | A | 0.0000 | |
| 113 | N | A | 0.0000 | |
| 114 | I | A | 1.6291 | |
| 115 | L | A | 0.0000 | |
| 116 | A | A | 0.0000 | |
| 117 | Y | A | 0.9228 | |
| 118 | W | A | 1.4753 | |
| 119 | V | A | 0.0000 | |
| 120 | D | A | -0.0516 | |
| 121 | G | A | 0.2429 | |
| 122 | D | A | -0.2601 | |
| 123 | M | A | 0.1416 | |
| 124 | D | A | -1.0694 | |
| 125 | L | A | 0.0000 | |
| 126 | S | A | 0.0000 | |
| 127 | V | A | 0.0000 | |
| 128 | S | A | 0.0000 | |
| 129 | M | A | 0.0000 | |
| 130 | T | A | 0.0000 | |
| 131 | T | A | 0.0000 | |
| 132 | C | A | 0.7976 | |
| 133 | S | A | 0.0000 | |
| 134 | T | A | 0.0000 | |
| 135 | L | A | 1.3113 | |
| 136 | L | A | 1.2635 | |
| 137 | A | A | 0.0000 | |
| 138 | L | A | 1.1328 | |
| 139 | G | A | 0.3954 | |
| 140 | M | A | 0.8373 | |
| 141 | M | A | 0.0000 | |
| 142 | P | A | 0.8900 | |
| 143 | L | A | 1.7079 | |
| 144 | C | A | 0.0000 | |
| 145 | L | A | 0.0000 | |
| 146 | L | A | 2.2362 | |
| 147 | I | A | 1.9964 | |
| 148 | Y | A | 1.5470 | |
| 149 | T | A | 0.0000 | |
| 150 | K | A | -0.7292 | |
| 151 | M | A | -0.0029 | |
| 152 | W | A | 0.0000 | |
| 153 | V | A | -0.3192 | |
| 154 | D | A | -1.9019 | |
| 155 | S | A | -1.2925 | |
| 156 | G | A | -0.6887 | |
| 157 | S | A | -0.2364 | |
| 158 | I | A | 0.6845 | |
| 159 | V | A | 1.7118 | |
| 160 | I | A | 0.0000 | |
| 161 | P | A | 0.0314 | |
| 162 | Y | A | -0.1752 | |
| 163 | D | A | -1.8491 | |
| 164 | N | A | -1.0281 | |
| 165 | I | A | 0.0000 | |
| 166 | G | A | -0.4294 | |
| 167 | T | A | -0.1781 | |
| 168 | S | A | 0.0000 | |
| 169 | L | A | 0.0000 | |
| 170 | V | A | 1.5354 | |
| 171 | S | A | 1.0926 | |
| 172 | L | A | 0.0000 | |
| 173 | V | A | 1.6002 | |
| 174 | V | A | 1.7842 | |
| 175 | P | A | 1.5332 | |
| 176 | V | A | 0.0000 | |
| 177 | S | A | 1.4818 | |
| 178 | I | A | 2.0285 | |
| 179 | G | A | 0.0000 | |
| 180 | M | A | 0.8190 | |
| 181 | F | A | 1.2574 | |
| 182 | V | A | 0.0000 | |
| 183 | N | A | -1.0936 | |
| 184 | H | A | -1.4598 | |
| 185 | K | A | -1.8238 | |
| 186 | W | A | -1.2709 | |
| 187 | P | A | -1.6513 | |
| 188 | Q | A | -2.1002 | |
| 189 | K | A | -1.6744 | |
| 190 | A | A | 0.0000 | |
| 191 | K | A | -1.6058 | |
| 192 | I | A | 0.4449 | |
| 193 | I | A | 0.4693 | |
| 194 | L | A | 0.2069 | |
| 195 | K | A | 0.0736 | |
| 196 | I | A | 2.2625 | |
| 197 | G | A | 0.0000 | |
| 198 | S | A | 1.3916 | |
| 199 | I | A | 2.7476 | |
| 200 | A | A | 2.4063 | |
| 201 | G | A | 1.9307 | |
| 202 | A | A | 2.3434 | |
| 203 | I | A | 3.4641 | |
| 204 | L | A | 0.0000 | |
| 205 | I | A | 2.4165 | |
| 206 | V | A | 3.4027 | |
| 207 | L | A | 2.5875 | |
| 208 | I | A | 0.0000 | |
| 209 | A | A | 2.3710 | |
| 210 | V | A | 2.8790 | |
| 211 | V | A | 2.0987 | |
| 212 | G | A | 0.0000 | |
| 213 | G | A | 1.3453 | |
| 214 | I | A | 2.2724 | |
| 215 | L | A | 0.9200 | |
| 216 | Y | A | 0.0000 | |
| 217 | Q | A | -0.0088 | |
| 218 | S | A | 0.1848 | |
| 219 | A | A | 0.0000 | |
| 220 | W | A | 1.4473 | |
| 221 | I | A | 2.1636 | |
| 222 | I | A | 1.3669 | |
| 223 | A | A | 0.6889 | |
| 224 | P | A | 0.1426 | |
| 225 | K | A | -0.4734 | |
| 226 | L | A | 0.0000 | |
| 227 | W | A | 0.9454 | |
| 228 | I | A | 1.4191 | |
| 229 | I | A | 0.0000 | |
| 230 | G | A | 0.0000 | |
| 231 | T | A | 1.3858 | |
| 232 | I | A | 1.3573 | |
| 233 | F | A | 0.0000 | |
| 234 | P | A | 0.0000 | |
| 235 | V | A | 0.9118 | |
| 236 | A | A | 0.6705 | |
| 237 | G | A | 0.0000 | |
| 238 | Y | A | 0.0000 | |
| 239 | S | A | 0.7148 | |
| 240 | L | A | 0.9908 | |
| 241 | G | A | 0.0000 | |
| 242 | F | A | 1.1360 | |
| 243 | L | A | 1.2741 | |
| 244 | L | A | 1.2823 | |
| 245 | A | A | 0.0000 | |
| 246 | R | A | -0.2459 | |
| 247 | I | A | 1.4135 | |
| 248 | A | A | 0.6830 | |
| 249 | G | A | -0.0463 | |
| 250 | L | A | 0.1585 | |
| 251 | P | A | -0.0580 | |
| 252 | W | A | 0.7451 | |
| 253 | Y | A | 0.7226 | |
| 254 | R | A | -0.0974 | |
| 255 | C | A | 0.0000 | |
| 256 | R | A | 0.1673 | |
| 257 | T | A | 0.0000 | |
| 258 | V | A | 0.0000 | |
| 259 | A | A | 0.0000 | |
| 260 | F | A | 0.0000 | |
| 261 | E | A | 0.0000 | |
| 262 | T | A | 0.0000 | |
| 263 | G | A | 0.0000 | |
| 264 | M | A | 0.0000 | |
| 265 | Q | A | 0.0000 | |
| 266 | N | A | 0.0000 | |
| 267 | T | A | 0.0000 | |
| 268 | Q | A | -0.0050 | |
| 269 | L | A | 0.0000 | |
| 270 | C | A | 0.0000 | |
| 271 | S | A | 0.0000 | |
| 272 | T | A | 0.0000 | |
| 273 | I | A | 0.0000 | |
| 274 | V | A | 0.0000 | |
| 275 | Q | A | 0.0000 | |
| 276 | L | A | 0.5065 | |
| 277 | S | A | -0.2327 | |
| 278 | F | A | 0.0000 | |
| 279 | T | A | -0.9841 | |
| 280 | P | A | -1.4919 | |
| 281 | E | A | -2.1756 | |
| 282 | E | A | -1.4020 | |
| 283 | L | A | 0.0000 | |
| 284 | N | A | -0.7157 | |
| 285 | V | A | 0.4133 | |
| 286 | V | A | 0.0000 | |
| 287 | F | A | 0.0000 | |
| 288 | T | A | 0.0000 | |
| 289 | F | A | 0.0000 | |
| 290 | P | A | 0.0000 | |
| 291 | L | A | 0.0000 | |
| 292 | I | A | 0.0000 | |
| 293 | Y | A | 0.0000 | |
| 294 | S | A | 1.1478 | |
| 295 | I | A | 2.0710 | |
| 296 | F | A | 1.7728 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | 1.8229 | |
| 299 | A | A | 1.5944 | |
| 300 | F | A | 1.5817 | |
| 301 | A | A | 0.0000 | |
| 302 | A | A | 1.3908 | |
| 303 | I | A | 2.0936 | |
| 304 | F | A | 2.0719 | |
| 305 | L | A | 1.9608 | |
| 306 | G | A | 1.6920 | |
| 307 | F | A | 2.5576 | |
| 308 | Y | A | 0.0000 | |
| 309 | V | A | 1.2076 | |
| 310 | A | A | 0.6569 | |
| 311 | Y | A | 0.4018 | |
| 312 | K | A | -1.5593 | |
| 313 | K | A | -2.2131 | |
| 314 | C | A | -1.7688 | |
| 315 | H | A | -2.7358 | |
| 316 | G | A | -3.1892 | |
| 317 | K | A | -3.7480 | |
| 318 | N | A | -3.6867 | |
| 319 | K | A | -3.0721 | |
| 320 | A | A | -2.3944 | |
| 321 | E | A | -2.4315 | |
| 322 | I | A | -0.3348 | |
| 323 | P | A | -1.1197 | |
| 324 | E | A | -2.4619 | |
| 325 | S | A | -2.1300 | |
| 326 | K | A | -3.5172 | |
| 327 | E | A | -3.6674 | |
| 328 | N | A | -2.7843 | |
| 329 | G | A | -1.8960 | |
| 330 | T | A | -1.4983 | |
| 331 | E | A | -2.5526 | |
| 332 | P | A | -2.1792 | |
| 333 | E | A | -2.3003 | |
| 334 | S | A | -0.7460 | |
| 335 | S | A | 0.3945 | |
| 336 | F | A | 1.7141 | |
| 337 | Y | A | 1.2360 | |
| 338 | K | A | -0.8252 | |
| 339 | A | A | -0.7651 | |
| 340 | N | A | -0.9937 | |
| 341 | G | A | -1.0356 | |
| 342 | G | A | -0.0543 | |
| 343 | F | A | 0.6312 | |
| 344 | Q | A | -1.4470 | |
| 345 | P | A | -1.8281 | |
| 346 | D | A | -3.4538 | |
| 347 | E | A | -3.8578 | |
| 348 | K | A | -3.2078 |