| Chain sequence(s) |
A: AEKDCIAPGAPCFGTDKPCCNPRAWCSSYANKCL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:51)
[INFO] Main: Simulation completed successfully. (00:00:52)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -1.4477 | |
| 2 | E | A | -3.0185 | |
| 3 | K | A | -3.3266 | |
| 4 | D | A | -2.9676 | |
| 5 | C | A | -1.7242 | |
| 6 | I | A | 0.0000 | |
| 7 | A | A | -1.1917 | |
| 8 | P | A | -0.3742 | |
| 9 | G | A | -0.6987 | |
| 10 | A | A | -0.5469 | |
| 11 | P | A | -0.4397 | |
| 12 | C | A | 0.0000 | |
| 13 | F | A | 0.5683 | |
| 14 | G | A | -0.5306 | |
| 15 | T | A | -0.9310 | |
| 16 | D | A | -1.8493 | |
| 17 | K | A | -1.3270 | |
| 18 | P | A | -0.1947 | |
| 19 | C | A | -0.0583 | |
| 20 | C | A | -0.6668 | |
| 21 | N | A | -1.2781 | |
| 22 | P | A | -1.4031 | |
| 23 | R | A | -1.7723 | |
| 24 | A | A | -0.1380 | |
| 25 | W | A | 1.0110 | |
| 26 | C | A | 0.9967 | |
| 27 | S | A | 0.0000 | |
| 28 | S | A | 0.6804 | |
| 29 | Y | A | 1.2236 | |
| 30 | A | A | 0.2241 | |
| 31 | N | A | -0.5200 | |
| 32 | K | A | -0.2737 | |
| 33 | C | A | 0.0000 | |
| 34 | L | A | 1.3009 |