| Chain sequence(s) |
A: LRKEPEIITVTLKKQNGMGLIIVVAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEVAKQGAIYHGLAT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:49)
[INFO] Main: Simulation completed successfully. (00:00:50)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 0.0065 | |
| 2 | R | A | -2.7156 | |
| 3 | K | A | -3.1521 | |
| 4 | E | A | -3.1658 | |
| 5 | P | A | -2.0933 | |
| 6 | E | A | -2.2740 | |
| 7 | I | A | -0.0843 | |
| 8 | I | A | 0.0777 | |
| 9 | T | A | -0.0950 | |
| 10 | V | A | 0.0000 | |
| 11 | T | A | -0.7954 | |
| 12 | L | A | 0.0000 | |
| 13 | K | A | -1.9504 | |
| 14 | K | A | -1.9674 | |
| 15 | Q | A | -2.4092 | |
| 16 | N | A | -2.2137 | |
| 17 | G | A | -1.4738 | |
| 18 | M | A | 0.0000 | |
| 19 | G | A | -0.1137 | |
| 20 | L | A | 0.5628 | |
| 21 | I | A | 1.0366 | |
| 22 | I | A | 0.2740 | |
| 23 | V | A | 0.3098 | |
| 24 | V | A | 0.2096 | |
| 25 | A | A | -0.4152 | |
| 26 | K | A | -2.1264 | |
| 27 | G | A | 0.0000 | |
| 28 | A | A | -0.8988 | |
| 29 | G | A | -1.4699 | |
| 30 | Q | A | -2.1213 | |
| 31 | D | A | -2.9293 | |
| 32 | K | A | -2.4040 | |
| 33 | L | A | -0.8669 | |
| 34 | G | A | 0.0000 | |
| 35 | I | A | 0.0000 | |
| 36 | Y | A | 0.0000 | |
| 37 | V | A | 0.0000 | |
| 38 | K | A | -0.8970 | |
| 39 | S | A | -0.2333 | |
| 40 | V | A | 0.3214 | |
| 41 | V | A | 0.3019 | |
| 42 | K | A | -1.2499 | |
| 43 | G | A | -0.9276 | |
| 44 | G | A | -0.8282 | |
| 45 | A | A | 0.0000 | |
| 46 | A | A | 0.0000 | |
| 47 | D | A | -0.5616 | |
| 48 | V | A | 0.4303 | |
| 49 | D | A | -0.8161 | |
| 50 | G | A | -0.9700 | |
| 51 | R | A | -1.5257 | |
| 52 | L | A | 0.0000 | |
| 53 | A | A | -0.7170 | |
| 54 | A | A | -0.5404 | |
| 55 | G | A | -0.5004 | |
| 56 | D | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | L | A | 0.0000 | |
| 59 | L | A | 0.0209 | |
| 60 | S | A | -1.1348 | |
| 61 | V | A | 0.0000 | |
| 62 | D | A | -2.3123 | |
| 63 | G | A | -2.1449 | |
| 64 | R | A | -2.2486 | |
| 65 | S | A | -0.9792 | |
| 66 | L | A | 0.0000 | |
| 67 | V | A | 0.5895 | |
| 68 | G | A | -0.5682 | |
| 69 | L | A | -0.5108 | |
| 70 | S | A | -1.1131 | |
| 71 | Q | A | -1.6494 | |
| 72 | E | A | -2.9226 | |
| 73 | R | A | -2.9670 | |
| 74 | A | A | 0.0000 | |
| 75 | A | A | -1.5443 | |
| 76 | E | A | -2.0704 | |
| 77 | L | A | -1.6921 | |
| 78 | M | A | 0.0000 | |
| 79 | T | A | -1.3242 | |
| 80 | R | A | -1.9447 | |
| 81 | T | A | -1.2425 | |
| 82 | S | A | -0.9812 | |
| 83 | S | A | -1.1691 | |
| 84 | V | A | -0.5684 | |
| 85 | V | A | 0.0000 | |
| 86 | T | A | -1.1819 | |
| 87 | L | A | 0.0000 | |
| 88 | E | A | -1.0178 | |
| 89 | V | A | 0.0000 | |
| 90 | A | A | 0.0000 | |
| 91 | K | A | -1.3043 | |
| 92 | Q | A | -1.2088 | |
| 93 | G | A | 0.0000 | |
| 94 | A | A | 0.0000 | |
| 95 | I | A | 0.6801 | |
| 96 | Y | A | -0.2691 | |
| 97 | H | A | -0.3728 | |
| 98 | G | A | -0.0094 | |
| 99 | L | A | 0.2759 | |
| 100 | A | A | 0.4245 | |
| 101 | T | A | 0.1857 |