Project name: query_structure

Status: done

Started: 2026-03-16 23:52:51
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Chain sequence(s) A: LRKEPEIITVTLKKQNGMGLIIVVAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEVAKQGAIYHGLAT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:49)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:50)
Show buried residues

Minimal score value
-3.1658
Maximal score value
1.0366
Average score
-0.7747
Total score value
-78.2474

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 L A 0.0065
2 R A -2.7156
3 K A -3.1521
4 E A -3.1658
5 P A -2.0933
6 E A -2.2740
7 I A -0.0843
8 I A 0.0777
9 T A -0.0950
10 V A 0.0000
11 T A -0.7954
12 L A 0.0000
13 K A -1.9504
14 K A -1.9674
15 Q A -2.4092
16 N A -2.2137
17 G A -1.4738
18 M A 0.0000
19 G A -0.1137
20 L A 0.5628
21 I A 1.0366
22 I A 0.2740
23 V A 0.3098
24 V A 0.2096
25 A A -0.4152
26 K A -2.1264
27 G A 0.0000
28 A A -0.8988
29 G A -1.4699
30 Q A -2.1213
31 D A -2.9293
32 K A -2.4040
33 L A -0.8669
34 G A 0.0000
35 I A 0.0000
36 Y A 0.0000
37 V A 0.0000
38 K A -0.8970
39 S A -0.2333
40 V A 0.3214
41 V A 0.3019
42 K A -1.2499
43 G A -0.9276
44 G A -0.8282
45 A A 0.0000
46 A A 0.0000
47 D A -0.5616
48 V A 0.4303
49 D A -0.8161
50 G A -0.9700
51 R A -1.5257
52 L A 0.0000
53 A A -0.7170
54 A A -0.5404
55 G A -0.5004
56 D A 0.0000
57 Q A 0.0000
58 L A 0.0000
59 L A 0.0209
60 S A -1.1348
61 V A 0.0000
62 D A -2.3123
63 G A -2.1449
64 R A -2.2486
65 S A -0.9792
66 L A 0.0000
67 V A 0.5895
68 G A -0.5682
69 L A -0.5108
70 S A -1.1131
71 Q A -1.6494
72 E A -2.9226
73 R A -2.9670
74 A A 0.0000
75 A A -1.5443
76 E A -2.0704
77 L A -1.6921
78 M A 0.0000
79 T A -1.3242
80 R A -1.9447
81 T A -1.2425
82 S A -0.9812
83 S A -1.1691
84 V A -0.5684
85 V A 0.0000
86 T A -1.1819
87 L A 0.0000
88 E A -1.0178
89 V A 0.0000
90 A A 0.0000
91 K A -1.3043
92 Q A -1.2088
93 G A 0.0000
94 A A 0.0000
95 I A 0.6801
96 Y A -0.2691
97 H A -0.3728
98 G A -0.0094
99 L A 0.2759
100 A A 0.4245
101 T A 0.1857
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Laboratory of Theory of Biopolymers 2018