| Chain sequence(s) |
A: ESCVFIPCLTSAIGCSCKSKVCYRNGIPCG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:45)
[INFO] Main: Simulation completed successfully. (00:00:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -0.1725 | |
| 2 | S | A | 0.3387 | |
| 3 | C | A | 1.0066 | |
| 4 | V | A | 1.9142 | |
| 5 | F | A | 2.6657 | |
| 6 | I | A | 1.9102 | |
| 7 | P | A | 1.0808 | |
| 8 | C | A | 0.0000 | |
| 9 | L | A | 1.6677 | |
| 10 | T | A | 1.0845 | |
| 11 | S | A | 0.7541 | |
| 12 | A | A | 1.1157 | |
| 13 | I | A | 1.8769 | |
| 14 | G | A | 0.2503 | |
| 15 | C | A | 0.0000 | |
| 16 | S | A | -0.3635 | |
| 17 | C | A | -0.4232 | |
| 18 | K | A | -1.7306 | |
| 19 | S | A | -1.2274 | |
| 20 | K | A | -1.0664 | |
| 21 | V | A | -0.3792 | |
| 22 | C | A | 0.0000 | |
| 23 | Y | A | -0.5198 | |
| 24 | R | A | -0.7698 | |
| 25 | N | A | -1.3009 | |
| 26 | G | A | -0.5425 | |
| 27 | I | A | 1.1175 | |
| 28 | P | A | 0.1366 | |
| 29 | C | A | 0.2276 | |
| 30 | G | A | -0.4401 |