| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFEDIVVNGKVLVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTTGHPLFNKFGDTENPTAPQHEGADDRVNFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRCGPEGHPLPAAPPPSPLYVPPPPSSPYAVLPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPLINVYDPKNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9433 | |
| 2 | L | A | 1.9650 | |
| 3 | P | A | 0.8383 | |
| 4 | P | A | 0.3817 | |
| 5 | T | A | 0.1244 | |
| 6 | T | A | 0.1349 | |
| 7 | P | A | 0.1882 | |
| 8 | V | A | 1.2099 | |
| 9 | A | A | 0.0891 | |
| 10 | K | A | -1.0272 | |
| 11 | V | A | -0.1731 | |
| 12 | Q | A | -1.4039 | |
| 13 | S | A | -1.5462 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.3939 | |
| 16 | E | A | -2.4262 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4627 | |
| 20 | P | A | 0.1318 | |
| 21 | T | A | 0.1610 | |
| 22 | S | A | -0.0928 | |
| 23 | L | A | 0.1000 | |
| 24 | F | A | -0.0266 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2241 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7900 | |
| 31 | R | A | -2.6333 | |
| 32 | L | A | -0.7692 | |
| 33 | L | A | 1.1713 | |
| 34 | T | A | 1.3727 | |
| 35 | V | A | 1.8307 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2764 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6949 | |
| 40 | E | A | -1.8075 | |
| 41 | D | A | -0.7915 | |
| 42 | I | A | 1.2358 | |
| 43 | V | A | 2.1694 | |
| 44 | V | A | 1.6394 | |
| 45 | N | A | -0.5492 | |
| 46 | G | A | -0.3780 | |
| 47 | K | A | -0.1561 | |
| 48 | V | A | 1.9725 | |
| 49 | L | A | 2.5122 | |
| 50 | V | A | 1.4144 | |
| 51 | P | A | 0.2890 | |
| 52 | K | A | -0.7496 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1272 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3593 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2292 | |
| 70 | K | A | -1.7781 | |
| 71 | F | A | -0.6194 | |
| 72 | A | A | -0.5747 | |
| 73 | L | A | -0.8675 | |
| 74 | P | A | -1.2109 | |
| 75 | Q | A | -2.5080 | |
| 76 | K | A | -3.1098 | |
| 77 | D | A | -2.9914 | |
| 78 | F | A | -1.6688 | |
| 79 | Y | A | -1.8880 | |
| 80 | D | A | -2.6917 | |
| 81 | P | A | -2.3058 | |
| 82 | E | A | -3.0524 | |
| 83 | K | A | -3.3990 | |
| 84 | E | A | -2.4657 | |
| 85 | R | A | -1.2957 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6702 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9599 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3550 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6874 | |
| 99 | G | A | -0.5206 | |
| 100 | P | A | -0.3779 | |
| 101 | L | A | 0.0957 | |
| 102 | G | A | -0.1961 | |
| 103 | K | A | -0.6064 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.3605 | |
| 106 | T | A | 0.0000 | |
| 107 | G | A | -0.0743 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.1565 | |
| 110 | L | A | -0.1175 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.2819 | |
| 113 | K | A | -0.4758 | |
| 114 | F | A | 0.0000 | |
| 115 | G | A | -1.1755 | |
| 116 | D | A | -1.3066 | |
| 117 | T | A | -0.9326 | |
| 118 | E | A | -1.7002 | |
| 119 | N | A | -1.9450 | |
| 120 | P | A | -1.5088 | |
| 121 | T | A | -0.8272 | |
| 122 | A | A | -0.7272 | |
| 123 | P | A | -0.6805 | |
| 124 | Q | A | -1.8044 | |
| 125 | H | A | -1.9521 | |
| 126 | E | A | -2.6280 | |
| 127 | G | A | -2.1733 | |
| 128 | A | A | -1.5007 | |
| 129 | D | A | -2.4049 | |
| 130 | D | A | -2.0482 | |
| 131 | R | A | -1.3991 | |
| 132 | V | A | -0.4398 | |
| 133 | N | A | -0.8784 | |
| 134 | F | A | -0.3821 | |
| 135 | S | A | -0.3186 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | 0.0000 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2084 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5595 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.1961 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1191 | |
| 157 | D | A | 0.2880 | |
| 158 | I | A | 0.8338 | |
| 159 | A | A | 0.1237 | |
| 160 | E | A | -1.4770 | |
| 161 | P | A | -0.2200 | |
| 162 | C | A | 0.1889 | |
| 163 | P | A | -0.1690 | |
| 164 | G | A | -0.0685 | |
| 165 | L | A | 0.6066 | |
| 166 | P | A | -0.1033 | |
| 167 | P | A | -0.3350 | |
| 168 | G | A | -0.4192 | |
| 169 | A | A | -0.0167 | |
| 170 | C | A | 0.7469 | |
| 171 | P | A | 0.5515 | |
| 172 | P | A | 0.8486 | |
| 173 | I | A | 2.0458 | |
| 174 | Q | A | 0.8494 | |
| 175 | L | A | 1.4491 | |
| 176 | V | A | 0.8429 | |
| 177 | N | A | -0.2874 | |
| 178 | S | A | 0.0349 | |
| 179 | V | A | 0.4367 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3840 | |
| 182 | D | A | 0.0872 | |
| 183 | G | A | -0.1583 | |
| 184 | D | A | -0.5263 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1339 | |
| 190 | F | A | 0.0669 | |
| 191 | G | A | -0.0989 | |
| 192 | N | A | -0.2543 | |
| 193 | M | A | -0.1145 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3732 | |
| 197 | E | A | -2.6232 | |
| 198 | L | A | -1.2257 | |
| 199 | Q | A | -2.5506 | |
| 200 | Q | A | -3.3057 | |
| 201 | D | A | -3.5777 | |
| 202 | R | A | -3.3319 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1746 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3450 | |
| 211 | S | A | -1.8818 | |
| 212 | T | A | -1.4146 | |
| 213 | R | A | -2.0494 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1563 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3480 | |
| 220 | L | A | 0.6122 | |
| 221 | K | A | -1.0930 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8099 | |
| 224 | N | A | -1.4862 | |
| 225 | E | A | -1.2269 | |
| 226 | A | A | -0.6012 | |
| 227 | Y | A | -0.3643 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6558 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0826 | |
| 234 | F | A | 0.2665 | |
| 235 | G | A | -0.8126 | |
| 236 | R | A | -2.5970 | |
| 237 | R | A | -2.8743 | |
| 238 | E | A | -2.1543 | |
| 239 | Q | A | -0.1878 | |
| 240 | V | A | 1.4812 | |
| 241 | Y | A | 1.2091 | |
| 242 | A | A | 0.3534 | |
| 243 | R | A | -0.6665 | |
| 244 | H | A | -0.7902 | |
| 245 | F | A | 0.1570 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.6228 | |
| 249 | C | A | -1.2350 | |
| 250 | G | A | -1.0615 | |
| 251 | P | A | -1.0365 | |
| 252 | E | A | -1.2967 | |
| 253 | G | A | -1.2502 | |
| 254 | H | A | -1.4397 | |
| 255 | P | A | -0.8864 | |
| 256 | L | A | 0.3189 | |
| 257 | P | A | 0.0028 | |
| 258 | A | A | 0.1832 | |
| 259 | A | A | 0.2981 | |
| 260 | P | A | -0.2766 | |
| 261 | P | A | 0.0057 | |
| 262 | P | A | 0.0572 | |
| 263 | S | A | 0.5608 | |
| 264 | P | A | 0.6797 | |
| 265 | L | A | 1.8824 | |
| 266 | Y | A | 1.7408 | |
| 267 | V | A | 1.9285 | |
| 268 | P | A | 0.9926 | |
| 269 | P | A | 0.6796 | |
| 270 | P | A | -0.1562 | |
| 271 | P | A | -0.1348 | |
| 272 | S | A | -0.3210 | |
| 273 | S | A | 0.2114 | |
| 274 | P | A | 0.3104 | |
| 275 | Y | A | 1.3592 | |
| 276 | A | A | 1.2463 | |
| 277 | V | A | 2.1984 | |
| 278 | L | A | 1.7045 | |
| 279 | P | A | 0.1137 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.3093 | |
| 282 | D | A | -0.9376 | |
| 283 | Y | A | 0.8274 | |
| 284 | F | A | 0.6757 | |
| 285 | G | A | 0.3174 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8655 | |
| 291 | L | A | 1.6060 | |
| 292 | V | A | 0.6205 | |
| 293 | S | A | -0.1456 | |
| 294 | S | A | -0.9499 | |
| 295 | D | A | -1.8425 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1076 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6342 | |
| 301 | R | A | -1.8400 | |
| 302 | P | A | -0.9541 | |
| 303 | F | A | -0.1914 | |
| 304 | W | A | -0.5687 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0896 | |
| 307 | R | A | -2.8338 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2621 | |
| 310 | G | A | -1.2233 | |
| 311 | N | A | -1.2687 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.7354 | |
| 319 | N | A | -0.8891 | |
| 320 | E | A | -1.0168 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3190 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0633 | |
| 333 | N | A | 0.5579 | |
| 334 | F | A | 1.7353 | |
| 335 | T | A | 0.8541 | |
| 336 | I | A | 0.4067 | |
| 337 | S | A | -0.8917 | |
| 338 | Q | A | -1.5165 | |
| 339 | Q | A | -0.7459 | |
| 340 | L | A | 0.6257 | |
| 341 | S | A | 0.6628 | |
| 342 | T | A | 0.5484 | |
| 343 | P | A | 0.5320 | |
| 344 | L | A | 1.6376 | |
| 345 | I | A | 1.4153 | |
| 346 | N | A | 0.4118 | |
| 347 | V | A | 1.9172 | |
| 348 | Y | A | 1.3568 | |
| 349 | D | A | -0.4360 | |
| 350 | P | A | -1.3161 | |
| 351 | K | A | -1.9565 | |
| 352 | N | A | -0.8840 | |
| 353 | F | A | -1.1919 | |
| 354 | K | A | -2.1145 | |
| 355 | N | A | -1.7390 | |
| 356 | Y | A | -0.1358 | |
| 357 | L | A | 0.6306 | |
| 358 | R | A | 0.9578 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3884 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0681 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0182 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6727 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2747 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3134 | |
| 376 | L | A | -1.7118 | |
| 377 | D | A | -1.9875 | |
| 378 | P | A | -1.0346 | |
| 379 | G | A | -1.0146 | |
| 380 | V | A | -0.9337 | |
| 381 | L | A | -0.5310 | |
| 382 | A | A | -0.6577 | |
| 383 | H | A | -0.8131 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4248 | |
| 386 | T | A | -0.5612 | |
| 387 | M | A | -0.3065 | |
| 388 | N | A | -0.8742 | |
| 389 | P | A | -1.2312 | |
| 390 | T | A | -1.3977 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.3896 | |
| 393 | E | A | -2.7156 | |
| 394 | N | A | -2.4286 | |
| 395 | W | A | -1.3029 | |
| 396 | N | A | -1.0942 | |
| 397 | L | A | -0.1895 | |
| 398 | G | A | 0.5190 | |
| 399 | F | A | 2.4086 | |
| 400 | V | A | 1.8204 | |
| 401 | P | A | 0.0419 | |
| 402 | P | A | -1.8144 | |
| 403 | K | A | -3.2961 | |
| 404 | E | A | -3.8088 | |
| 405 | R | A | -3.8118 | |
| 406 | E | A | -3.7481 | |
| 407 | D | A | -2.8517 | |
| 408 | P | A | -1.7540 | |
| 409 | Y | A | -0.9877 | |
| 410 | K | A | -2.1037 | |
| 411 | G | A | -0.6354 | |
| 412 | L | A | 0.6776 | |
| 413 | I | A | 1.5955 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3781 | |
| 416 | E | A | -1.6586 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9182 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.9994 | |
| 421 | E | A | -2.7078 | |
| 422 | R | A | -2.4762 | |
| 423 | F | A | -1.2046 | |
| 424 | S | A | -1.4231 | |
| 425 | Q | A | -1.8267 | |
| 426 | D | A | -2.9629 | |
| 427 | L | A | -2.1643 | |
| 428 | D | A | -3.0262 | |
| 429 | Q | A | -2.7500 | |
| 430 | F | A | -1.6132 | |
| 431 | A | A | -1.1489 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.3195 | |
| 435 | K | A | -1.1124 | |
| 436 | F | A | -0.1149 | |
| 437 | L | A | 0.7754 | |
| 438 | Y | A | 0.6179 | |
| 439 | Q | A | -0.3921 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine