Project name: query_structure

Status: done

Started: 2026-03-16 23:29:41
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Chain sequence(s) A: GPSQGQLVESGGGLVQPGGSLRLSSAASGFTLDYYAIGWFRQAPGKEREGVSSISNSGGSTKYADSVKGRFTISRDKAKNTVYLQMNSLKPEDTGVYYSAADRGYSEYDLPSDLVIYGMDYWGKGTPVTVSA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:35)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:36)
Show buried residues

Minimal score value
-3.5072
Maximal score value
1.2261
Average score
-0.7601
Total score value
-100.3321

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.8296
2 P A -0.9651
3 S A -1.3449
4 Q A -1.7698
5 G A -1.1644
6 Q A -1.4275
7 L A 0.0000
8 V A 0.6578
9 E A 0.0000
10 S A -0.4249
11 G A -1.1511
12 G A -0.4975
13 G A 0.2392
14 L A 1.2048
15 V A 0.0480
16 Q A -1.2254
17 P A -1.5366
18 G A -1.4702
19 G A -1.0391
20 S A -1.3069
21 L A -1.1269
22 R A -2.3492
23 L A 0.0000
24 S A -0.4917
25 S A 0.0000
26 A A -0.2049
27 A A -0.2993
28 S A -0.6678
29 G A -1.0692
30 F A -0.3028
31 T A -0.3347
32 L A 0.0000
33 D A -0.5364
34 Y A 0.6690
35 Y A 0.0000
36 A A -0.2580
37 I A 0.0000
38 G A 0.0000
39 W A 0.0000
40 F A 0.0000
41 R A 0.0000
42 Q A -1.9410
43 A A -1.8013
44 P A -1.3160
45 G A -1.7995
46 K A -2.9555
47 E A -3.5072
48 R A -3.0160
49 E A -1.7659
50 G A -1.1711
51 V A 0.0000
52 S A 0.0000
53 S A 0.0000
54 I A 0.0000
55 S A -0.7326
56 N A -0.8453
57 S A -0.9804
58 G A -1.0793
59 G A -0.9806
60 S A -1.3390
61 T A -1.1022
62 K A -2.2859
63 Y A -1.7266
64 A A -1.7881
65 D A -2.6762
66 S A -1.8678
67 V A 0.0000
68 K A -2.8614
69 G A -1.8641
70 R A -1.7372
71 F A 0.0000
72 T A -1.2685
73 I A 0.0000
74 S A -0.7436
75 R A -1.4640
76 D A -2.2161
77 K A -2.8529
78 A A -1.9555
79 K A -2.5801
80 N A -1.9618
81 T A 0.0000
82 V A 0.0000
83 Y A -0.7677
84 L A 0.0000
85 Q A -1.7171
86 M A 0.0000
87 N A -2.0110
88 S A -1.4585
89 L A 0.0000
90 K A -2.3471
91 P A -1.7628
92 E A -2.2897
93 D A 0.0000
94 T A -0.7223
95 G A 0.0000
96 V A -0.3048
97 Y A 0.0000
98 Y A -0.2770
99 S A 0.0000
100 A A 0.0000
101 A A 0.0000
102 D A -1.1946
103 R A -1.8137
104 G A -0.3813
105 Y A 0.8247
106 S A -0.4112
107 E A -1.2796
108 Y A 0.2902
109 D A -0.9545
110 L A 0.8881
111 P A 0.0517
112 S A -0.4937
113 D A -0.7851
114 L A 1.2248
115 V A 0.9150
116 I A 0.9254
117 Y A 1.2261
118 G A -0.2535
119 M A 0.0000
120 D A -2.0593
121 Y A -1.0707
122 W A -0.1988
123 G A -0.3642
124 K A -1.3721
125 G A 0.0000
126 T A 0.0000
127 P A -0.0737
128 V A 0.0000
129 T A -0.0169
130 V A 0.0000
131 S A -0.5207
132 A A -0.6187
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Laboratory of Theory of Biopolymers 2018