| Chain sequence(s) |
A: FTGHKTF
C: FTGHKTF B: FTGHKTF E: FTGHKTF D: FTGHKTF G: FTGHKTF F: FTGHKTF I: FTGHKTF H: FTGHKTF K: FTGHKTF J: FTGHKTF M: FTGHKTF L: FTGHKTF O: FTGHKTF N: FTGHKTF Q: FTGHKTF P: FTGHKTF S: FTGHKTF R: FTGHKTF T: FTGHKTF input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:11)
[INFO] Main: Simulation completed successfully. (00:04:15)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 1.1362 | |
| 2 | T | A | 0.2708 | |
| 3 | G | A | -0.3445 | |
| 4 | H | A | 0.0000 | |
| 5 | K | A | -0.5211 | |
| 6 | T | A | 0.0000 | |
| 7 | F | A | 1.8733 | |
| 1 | F | B | 1.1210 | |
| 2 | T | B | 0.2326 | |
| 3 | G | B | -0.4036 | |
| 4 | H | B | 0.0000 | |
| 5 | K | B | -0.4945 | |
| 6 | T | B | 0.0000 | |
| 7 | F | B | 2.3317 | |
| 1 | F | C | 1.4633 | |
| 2 | T | C | 0.2061 | |
| 3 | G | C | -0.4432 | |
| 4 | H | C | 0.0000 | |
| 5 | K | C | -0.4946 | |
| 6 | T | C | 0.0000 | |
| 7 | F | C | 2.5119 | |
| 1 | F | D | 1.7603 | |
| 2 | T | D | 0.5230 | |
| 3 | G | D | -0.2366 | |
| 4 | H | D | 0.0000 | |
| 5 | K | D | -0.4720 | |
| 6 | T | D | 0.0000 | |
| 7 | F | D | 2.7777 | |
| 1 | F | E | 2.6041 | |
| 2 | T | E | 0.9381 | |
| 3 | G | E | -0.4695 | |
| 4 | H | E | -0.8993 | |
| 5 | K | E | -0.8158 | |
| 6 | T | E | 0.8249 | |
| 7 | F | E | 2.8407 | |
| 1 | F | F | 1.8838 | |
| 2 | T | F | 0.6083 | |
| 3 | G | F | -0.7255 | |
| 4 | H | F | -1.3963 | |
| 5 | K | F | -1.7567 | |
| 6 | T | F | 0.1813 | |
| 7 | F | F | 2.3060 | |
| 1 | F | G | 1.9792 | |
| 2 | T | G | 0.3184 | |
| 3 | G | G | -0.5719 | |
| 4 | H | G | -0.9114 | |
| 5 | K | G | -1.5178 | |
| 6 | T | G | 0.0000 | |
| 7 | F | G | 2.2659 | |
| 1 | F | H | 1.4768 | |
| 2 | T | H | 0.3397 | |
| 3 | G | H | -0.5476 | |
| 4 | H | H | 0.0000 | |
| 5 | K | H | -0.8855 | |
| 6 | T | H | 0.0000 | |
| 7 | F | H | 1.8519 | |
| 1 | F | I | 1.3347 | |
| 2 | T | I | 0.1879 | |
| 3 | G | I | -0.4227 | |
| 4 | H | I | 0.0000 | |
| 5 | K | I | -0.7644 | |
| 6 | T | I | 0.0000 | |
| 7 | F | I | 1.8901 | |
| 1 | F | J | 1.2989 | |
| 2 | T | J | 0.2491 | |
| 3 | G | J | -0.3137 | |
| 4 | H | J | 0.0000 | |
| 5 | K | J | -0.6110 | |
| 6 | T | J | 0.0000 | |
| 7 | F | J | 1.5910 | |
| 1 | F | K | 1.6336 | |
| 2 | T | K | 0.6306 | |
| 3 | G | K | -0.1161 | |
| 4 | H | K | 0.0000 | |
| 5 | K | K | -0.7262 | |
| 6 | T | K | 0.0000 | |
| 7 | F | K | 1.4278 | |
| 1 | F | L | 2.6096 | |
| 2 | T | L | 1.1569 | |
| 3 | G | L | 0.0642 | |
| 4 | H | L | 0.0000 | |
| 5 | K | L | -0.9038 | |
| 6 | T | L | 0.0000 | |
| 7 | F | L | 1.4078 | |
| 1 | F | M | 1.5735 | |
| 2 | T | M | 1.1153 | |
| 3 | G | M | 0.4956 | |
| 4 | H | M | 0.0000 | |
| 5 | K | M | -1.0721 | |
| 6 | T | M | 0.0000 | |
| 7 | F | M | 1.1042 | |
| 1 | F | N | 2.7423 | |
| 2 | T | N | 0.6748 | |
| 3 | G | N | -0.4676 | |
| 4 | H | N | -1.1193 | |
| 5 | K | N | -1.5091 | |
| 6 | T | N | 0.2462 | |
| 7 | F | N | 1.8627 | |
| 1 | F | O | 1.8470 | |
| 2 | T | O | 0.4569 | |
| 3 | G | O | -0.7896 | |
| 4 | H | O | 0.0000 | |
| 5 | K | O | -1.2436 | |
| 6 | T | O | 0.0000 | |
| 7 | F | O | 2.0560 | |
| 1 | F | P | 1.9806 | |
| 2 | T | P | 0.3905 | |
| 3 | G | P | -1.0158 | |
| 4 | H | P | -1.6807 | |
| 5 | K | P | -1.8718 | |
| 6 | T | P | 0.2134 | |
| 7 | F | P | 2.2299 | |
| 1 | F | Q | 1.0971 | |
| 2 | T | Q | 0.3426 | |
| 3 | G | Q | -0.6840 | |
| 4 | H | Q | 0.0000 | |
| 5 | K | Q | -0.8377 | |
| 6 | T | Q | 0.0000 | |
| 7 | F | Q | 2.2435 | |
| 1 | F | R | 0.9728 | |
| 2 | T | R | 0.1820 | |
| 3 | G | R | -0.5942 | |
| 4 | H | R | 0.0000 | |
| 5 | K | R | -0.7194 | |
| 6 | T | R | 0.0000 | |
| 7 | F | R | 2.2602 | |
| 1 | F | S | 1.2439 | |
| 2 | T | S | 0.1952 | |
| 3 | G | S | -0.5195 | |
| 4 | H | S | 0.0000 | |
| 5 | K | S | -0.6725 | |
| 6 | T | S | 0.0000 | |
| 7 | F | S | 2.3651 | |
| 1 | F | T | 1.1465 | |
| 2 | T | T | 0.2541 | |
| 3 | G | T | -0.4137 | |
| 4 | H | T | 0.0000 | |
| 5 | K | T | -0.6391 | |
| 6 | T | T | 0.0000 | |
| 7 | F | T | 1.9996 |