| Chain sequence(s) |
A: AFTVTVPKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVKLQDAGVYRCMISYGGADYKRITVKVNA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:38)
[INFO] Main: Simulation completed successfully. (00:01:38)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 18 | A | A | -0.0091 | |
| 19 | F | A | -0.0339 | |
| 20 | T | A | -0.1413 | |
| 21 | V | A | 0.0000 | |
| 22 | T | A | -0.9261 | |
| 23 | V | A | -1.2183 | |
| 24 | P | A | -1.2779 | |
| 25 | K | A | -2.4007 | |
| 26 | D | A | -2.5161 | |
| 27 | L | A | -0.4332 | |
| 28 | Y | A | 0.1906 | |
| 29 | V | A | 1.0905 | |
| 30 | V | A | 0.0000 | |
| 31 | E | A | -2.0464 | |
| 32 | Y | A | -1.1293 | |
| 33 | G | A | -1.7239 | |
| 34 | S | A | -1.9737 | |
| 35 | N | A | -2.3601 | |
| 36 | M | A | 0.0000 | |
| 37 | T | A | -0.6428 | |
| 38 | I | A | 0.0000 | |
| 39 | E | A | -1.0896 | |
| 40 | C | A | 0.0000 | |
| 41 | K | A | -0.8335 | |
| 42 | F | A | 0.0000 | |
| 43 | P | A | -0.5162 | |
| 44 | V | A | -1.3338 | |
| 45 | E | A | -2.8950 | |
| 46 | K | A | -3.1180 | |
| 47 | Q | A | -2.5159 | |
| 48 | L | A | -1.3969 | |
| 49 | D | A | -1.9927 | |
| 50 | L | A | -0.2913 | |
| 51 | A | A | -0.2946 | |
| 52 | A | A | -0.2725 | |
| 53 | L | A | 0.0000 | |
| 54 | I | A | 0.3667 | |
| 55 | V | A | 0.0000 | |
| 56 | Y | A | 0.2029 | |
| 57 | W | A | 0.0000 | |
| 58 | E | A | -1.8667 | |
| 59 | M | A | 0.0000 | |
| 60 | E | A | -2.9989 | |
| 61 | D | A | -3.2705 | |
| 62 | K | A | -2.3248 | |
| 63 | N | A | -1.5033 | |
| 64 | I | A | 0.0000 | |
| 65 | I | A | 0.0000 | |
| 66 | Q | A | -0.5573 | |
| 67 | F | A | 0.0000 | |
| 68 | V | A | -0.3596 | |
| 69 | H | A | -0.8456 | |
| 70 | G | A | -1.4768 | |
| 71 | E | A | -2.0584 | |
| 72 | E | A | -1.6503 | |
| 73 | D | A | -0.7056 | |
| 74 | L | A | -0.0124 | |
| 75 | K | A | -0.6531 | |
| 76 | V | A | 0.5330 | |
| 77 | Q | A | 0.0000 | |
| 78 | H | A | -1.2164 | |
| 79 | S | A | -1.3020 | |
| 80 | S | A | -1.4016 | |
| 81 | Y | A | 0.0000 | |
| 82 | R | A | -2.7333 | |
| 83 | Q | A | -2.6228 | |
| 84 | R | A | -2.3447 | |
| 85 | A | A | 0.0000 | |
| 86 | R | A | -2.7197 | |
| 87 | L | A | 0.0000 | |
| 88 | L | A | -1.7022 | |
| 89 | K | A | -2.8188 | |
| 90 | D | A | -2.4364 | |
| 91 | Q | A | -1.2977 | |
| 92 | L | A | 0.0000 | |
| 93 | S | A | -0.9508 | |
| 94 | L | A | 0.4348 | |
| 95 | G | A | 0.0000 | |
| 96 | N | A | -0.5790 | |
| 97 | A | A | 0.0000 | |
| 98 | A | A | 0.0000 | |
| 99 | L | A | 0.0000 | |
| 100 | Q | A | -1.1131 | |
| 101 | I | A | 0.0000 | |
| 102 | T | A | -2.1959 | |
| 103 | D | A | -2.7719 | |
| 104 | V | A | 0.0000 | |
| 105 | K | A | -1.4673 | |
| 106 | L | A | 0.0082 | |
| 107 | Q | A | -0.7871 | |
| 108 | D | A | 0.0000 | |
| 109 | A | A | -0.2387 | |
| 110 | G | A | -0.3706 | |
| 111 | V | A | -0.8279 | |
| 112 | Y | A | 0.0000 | |
| 113 | R | A | -1.7759 | |
| 114 | C | A | 0.0000 | |
| 115 | M | A | 0.1422 | |
| 116 | I | A | 0.0000 | |
| 117 | S | A | 0.1462 | |
| 118 | Y | A | 0.0000 | |
| 119 | G | A | -0.6226 | |
| 120 | G | A | -0.5495 | |
| 121 | A | A | -0.0402 | |
| 122 | D | A | 0.0534 | |
| 123 | Y | A | 0.2476 | |
| 124 | K | A | -1.3600 | |
| 125 | R | A | -2.4067 | |
| 126 | I | A | 0.0000 | |
| 127 | T | A | -0.6983 | |
| 128 | V | A | 0.0000 | |
| 129 | K | A | -0.4157 | |
| 130 | V | A | -0.7393 | |
| 131 | N | A | -1.1368 | |
| 132 | A | A | -0.7046 |