Project name: query_structure

Status: done

Started: 2026-03-16 23:49:36
Settings
Chain sequence(s) A: IPYCGQTGAECYSWCIKQDLSKDWCCDFVKDIRMNPPADKCP
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:30)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:30)
Show buried residues

Minimal score value
-3.487
Maximal score value
1.7141
Average score
-1.1567
Total score value
-48.5805

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 I A 1.7141
2 P A 1.1919
3 Y A 1.6455
4 C A 0.9801
5 G A 0.3500
6 Q A -0.9896
7 T A -1.1669
8 G A 0.0000
9 A A -1.7373
10 E A -1.6608
11 C A 0.0000
12 Y A 0.0000
13 S A -0.5061
14 W A -0.0619
15 C A 0.0000
16 I A -0.9373
17 K A -1.9157
18 Q A -1.7398
19 D A -2.0009
20 L A -0.3383
21 S A -1.3221
22 K A -2.4901
23 D A -2.5409
24 W A -1.4055
25 C A 0.0000
26 C A -2.3864
27 D A -3.1005
28 F A -1.7140
29 V A 0.0000
30 K A -3.4870
31 D A -3.2823
32 I A -1.7347
33 R A -2.6149
34 M A -2.0577
35 N A -2.2254
36 P A -2.2065
37 P A -1.4780
38 A A -1.2042
39 D A -2.0957
40 K A -1.6680
41 C A -1.5257
42 P A -0.8679
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Laboratory of Theory of Biopolymers 2018