| Chain sequence(s) |
A: IPYCGQTGAECYSWCIKQDLSKDWCCDFVKDIRMNPPADKCP
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:30)
[INFO] Main: Simulation completed successfully. (00:00:30)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | I | A | 1.7141 | |
| 2 | P | A | 1.1919 | |
| 3 | Y | A | 1.6455 | |
| 4 | C | A | 0.9801 | |
| 5 | G | A | 0.3500 | |
| 6 | Q | A | -0.9896 | |
| 7 | T | A | -1.1669 | |
| 8 | G | A | 0.0000 | |
| 9 | A | A | -1.7373 | |
| 10 | E | A | -1.6608 | |
| 11 | C | A | 0.0000 | |
| 12 | Y | A | 0.0000 | |
| 13 | S | A | -0.5061 | |
| 14 | W | A | -0.0619 | |
| 15 | C | A | 0.0000 | |
| 16 | I | A | -0.9373 | |
| 17 | K | A | -1.9157 | |
| 18 | Q | A | -1.7398 | |
| 19 | D | A | -2.0009 | |
| 20 | L | A | -0.3383 | |
| 21 | S | A | -1.3221 | |
| 22 | K | A | -2.4901 | |
| 23 | D | A | -2.5409 | |
| 24 | W | A | -1.4055 | |
| 25 | C | A | 0.0000 | |
| 26 | C | A | -2.3864 | |
| 27 | D | A | -3.1005 | |
| 28 | F | A | -1.7140 | |
| 29 | V | A | 0.0000 | |
| 30 | K | A | -3.4870 | |
| 31 | D | A | -3.2823 | |
| 32 | I | A | -1.7347 | |
| 33 | R | A | -2.6149 | |
| 34 | M | A | -2.0577 | |
| 35 | N | A | -2.2254 | |
| 36 | P | A | -2.2065 | |
| 37 | P | A | -1.4780 | |
| 38 | A | A | -1.2042 | |
| 39 | D | A | -2.0957 | |
| 40 | K | A | -1.6680 | |
| 41 | C | A | -1.5257 | |
| 42 | P | A | -0.8679 |