Project name: query_structure

Status: done

Started: 2026-03-17 00:23:50
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Chain sequence(s) A: QVQLQESGGGLVQAGGSLRLSCAASGYISDAYYMGWYRQAPGKEREFVATITHGTNTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAAPVPIFRSLGTFFGPNHWYWGQGTQVTVSSLE
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:36)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:37)
Show buried residues

Minimal score value
-3.145
Maximal score value
1.7274
Average score
-0.5809
Total score value
-74.3489

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q A -1.2352
2 V A -0.3757
3 Q A -1.6022
4 L A 0.0000
5 Q A -1.7160
6 E A 0.0000
7 S A -1.1991
8 G A -1.0314
9 G A -0.8312
10 G A -0.0616
11 L A 1.0522
12 V A 0.2098
13 Q A -0.9740
14 A A -1.1901
15 G A -1.1048
16 G A -0.8734
17 S A -1.2078
18 L A -1.0265
19 R A -2.1287
20 L A 0.0000
21 S A -0.8498
22 C A 0.0000
23 A A -1.1285
24 A A -0.6861
25 S A -0.6822
26 G A -0.0461
27 Y A 0.5735
28 I A 0.0000
29 S A -0.9525
30 D A -1.3577
31 A A 0.0000
32 Y A 0.7309
33 Y A 0.1884
34 M A 0.0000
35 G A 0.0000
36 W A 0.0000
37 Y A 0.0449
38 R A 0.0000
39 Q A -1.7480
40 A A -1.8147
41 P A -1.2925
42 G A -1.7646
43 K A -2.8696
44 E A -3.1450
45 R A -2.2435
46 E A -1.0486
47 F A 0.2845
48 V A 0.0000
49 A A 0.0000
50 T A 0.4303
51 I A 0.0000
52 T A 0.0000
53 H A -1.3291
54 G A -1.0161
55 T A -1.0748
56 N A -1.3012
57 T A -0.1162
58 Y A 0.7663
59 Y A -0.1140
60 A A -0.8743
61 D A -2.2329
62 S A -1.7423
63 V A 0.0000
64 K A -2.4564
65 G A -1.7870
66 R A -1.4879
67 F A 0.0000
68 T A -0.7099
69 I A 0.0000
70 S A -0.5768
71 R A -1.0972
72 D A -1.6446
73 N A -1.6929
74 A A -1.1938
75 K A -2.0507
76 N A -1.4464
77 T A 0.0000
78 V A 0.0000
79 Y A -0.6341
80 L A 0.0000
81 Q A -1.2189
82 M A 0.0000
83 N A -1.3994
84 S A -1.2013
85 L A 0.0000
86 K A -2.2566
87 P A -1.6299
88 E A -2.2983
89 D A 0.0000
90 T A -0.8949
91 A A 0.0000
92 V A -0.6026
93 Y A 0.0000
94 Y A -0.3811
95 C A 0.0000
96 A A 0.0000
97 A A 0.0000
98 P A 0.0000
99 V A 0.6805
100 P A 0.6335
101 I A 1.0193
102 F A 1.7274
103 R A -0.0925
104 S A 0.2392
105 L A 1.2263
106 G A 0.6047
107 T A 0.8145
108 F A 1.2882
109 F A 0.8769
110 G A -0.3364
111 P A -0.9035
112 N A -1.6784
113 H A -1.1561
114 W A -0.0471
115 Y A 0.1420
116 W A 0.1441
117 G A -0.7593
118 Q A -1.5695
119 G A -1.0007
120 T A 0.0000
121 Q A -1.1856
122 V A 0.0000
123 T A -0.2655
124 V A 0.0000
125 S A -0.5575
126 S A -0.7615
127 L A 0.2069
128 E A -1.2709
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Laboratory of Theory of Biopolymers 2018