| Chain sequence(s) |
H: QVQLQQPGAELVKPGASVKMSCKASGYTFTSYNMHWVKQTPGQGLEWIGVIYSGNGDTSYNQKFKGKATLTADKSSSTAYMQINSLTSEDSAVYYCARERDTRFGNWGQGTLVTVSA
L: NIVLTQSPASLAVSLGLRATISCRASESVDIYGNSFMHWYQQKPGQPPKLLIYLASNLESGVPARFSGSGSRTDFTLTIDPVEADDAATYYCQQNNEDPYTFGGGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | AS105H,AG9H,LS123H,QA120H,GR47H,VA55H,AV80H,YF103H,QR48H |
| Energy difference between WT (input) and mutated protein (by FoldX) | 1.332 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] FoldX: Building mutant model (00:01:20)
[INFO] FoldX: Starting FoldX energy minimalization (00:05:37)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:49)
[INFO] Main: Simulation completed successfully. (00:06:51)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.3332 | |
| 2 | V | H | -0.8473 | |
| 3 | Q | H | -1.3167 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -1.3431 | |
| 6 | Q | H | -1.0050 | |
| 7 | P | H | -1.0265 | |
| 8 | G | H | -1.0465 | |
| 9 | G | H | -0.8567 | mutated: AG9H |
| 11 | E | H | -0.7113 | |
| 12 | L | H | 0.6104 | |
| 13 | V | H | -0.4349 | |
| 14 | K | H | -1.6230 | |
| 15 | P | H | -1.3905 | |
| 16 | G | H | -1.1816 | |
| 17 | A | H | -0.9893 | |
| 18 | S | H | -1.0712 | |
| 19 | V | H | 0.0000 | |
| 20 | K | H | -1.2816 | |
| 21 | M | H | 0.0000 | |
| 22 | S | H | -0.6201 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -1.3723 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.9229 | |
| 27 | G | H | -0.8294 | |
| 28 | Y | H | -0.2879 | |
| 29 | T | H | -0.1812 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | -0.5994 | |
| 36 | S | H | -0.5197 | |
| 37 | Y | H | -0.7185 | |
| 38 | N | H | -0.9459 | |
| 39 | M | H | 0.0000 | |
| 40 | H | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | K | H | 0.0000 | |
| 44 | Q | H | -0.8393 | |
| 45 | T | H | -1.6304 | |
| 46 | P | H | -1.7072 | |
| 47 | R | H | -2.9484 | mutated: GR47H |
| 48 | R | H | -3.0431 | mutated: QR48H |
| 49 | G | H | -1.8340 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -1.0257 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | A | H | 0.0000 | mutated: VA55H |
| 56 | I | H | 0.0000 | |
| 57 | Y | H | -0.4782 | |
| 58 | S | H | 0.0000 | |
| 59 | G | H | -1.1764 | |
| 62 | N | H | -1.8605 | |
| 63 | G | H | -1.7315 | |
| 64 | D | H | -2.1489 | |
| 65 | T | H | -0.9819 | |
| 66 | S | H | -0.9081 | |
| 67 | Y | H | -1.2558 | |
| 68 | N | H | 0.0000 | |
| 69 | Q | H | -2.9539 | |
| 70 | K | H | -2.8802 | |
| 71 | F | H | 0.0000 | |
| 72 | K | H | -2.8335 | |
| 74 | G | H | -1.9263 | |
| 75 | K | H | -1.6783 | |
| 76 | A | H | 0.0000 | |
| 77 | T | H | -0.7316 | |
| 78 | L | H | 0.0000 | |
| 79 | T | H | -0.3749 | |
| 80 | V | H | -0.3293 | mutated: AV80H |
| 81 | D | H | -1.0930 | |
| 82 | K | H | -1.3409 | |
| 83 | S | H | -0.8566 | |
| 84 | S | H | -0.7822 | |
| 85 | S | H | -0.8661 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.2181 | |
| 89 | M | H | 0.0000 | |
| 90 | Q | H | -0.8956 | |
| 91 | I | H | 0.0000 | |
| 92 | N | H | -0.9498 | |
| 93 | S | H | -0.9544 | |
| 94 | L | H | 0.0000 | |
| 95 | T | H | -1.3005 | |
| 96 | S | H | -1.4473 | |
| 97 | E | H | -1.9701 | |
| 98 | D | H | 0.0000 | |
| 99 | S | H | -0.6111 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.1351 | |
| 102 | Y | H | 0.0000 | |
| 103 | F | H | 0.0000 | mutated: YF103H |
| 104 | C | H | 0.0000 | |
| 105 | S | H | 0.0000 | mutated: AS105H |
| 106 | R | H | 0.0000 | |
| 107 | E | H | -1.7735 | |
| 108 | R | H | -3.0738 | |
| 109 | D | H | -2.8363 | |
| 113 | T | H | -1.5223 | |
| 114 | R | H | -1.4806 | |
| 115 | F | H | 0.0000 | |
| 116 | G | H | -1.4854 | |
| 117 | N | H | -0.9354 | |
| 118 | W | H | -0.6072 | |
| 119 | G | H | 0.0000 | |
| 120 | A | H | -0.6423 | mutated: QA120H |
| 121 | G | H | 0.0000 | |
| 122 | T | H | 0.0000 | |
| 123 | S | H | -0.3183 | mutated: LS123H |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.3068 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.4209 | |
| 128 | A | H | -0.4371 | |
| 1 | N | L | -1.6261 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.7869 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -0.6505 | |
| 6 | Q | L | -0.7012 | |
| 7 | S | L | -0.6436 | |
| 8 | P | L | -0.4621 | |
| 9 | A | L | -0.5459 | |
| 10 | S | L | -0.9597 | |
| 11 | L | L | -0.5068 | |
| 12 | A | L | -0.8658 | |
| 13 | V | L | 0.0000 | |
| 14 | S | L | -0.4650 | |
| 15 | L | L | -0.0097 | |
| 16 | G | L | -0.4522 | |
| 17 | L | L | -0.0459 | |
| 18 | R | L | -1.9576 | |
| 19 | A | L | 0.0000 | |
| 20 | T | L | -0.7491 | |
| 21 | I | L | 0.0000 | |
| 22 | S | L | -0.9125 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.5897 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.2099 | |
| 27 | E | L | -2.1053 | |
| 28 | S | L | -1.9246 | |
| 29 | V | L | 0.0000 | |
| 30 | D | L | -0.9854 | |
| 31 | I | L | 0.5052 | |
| 34 | Y | L | 1.1396 | |
| 35 | G | L | -0.0926 | |
| 36 | N | L | -0.6926 | |
| 37 | S | L | -0.7535 | |
| 38 | F | L | -0.1957 | |
| 39 | M | L | 0.0000 | |
| 40 | H | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -1.2636 | |
| 45 | K | L | -1.6348 | |
| 46 | P | L | -1.0965 | |
| 47 | G | L | -1.2955 | |
| 48 | Q | L | -1.8338 | |
| 49 | P | L | -1.0809 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.5170 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.1507 | |
| 56 | L | L | -0.3118 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.4616 | |
| 66 | N | L | -0.4534 | |
| 67 | L | L | 0.0284 | |
| 68 | E | L | -0.5559 | |
| 69 | S | L | -0.5662 | |
| 70 | G | L | -0.5710 | |
| 71 | V | L | 0.0000 | |
| 72 | P | L | -0.2816 | |
| 74 | A | L | -0.3805 | |
| 75 | R | L | -1.2939 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.5654 | |
| 78 | G | L | -0.3525 | |
| 79 | S | L | -0.7401 | |
| 80 | G | L | -1.4292 | |
| 83 | S | L | -2.0038 | |
| 84 | R | L | -2.9152 | |
| 85 | T | L | -2.6017 | |
| 86 | D | L | -2.6178 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.7976 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -1.0110 | |
| 91 | I | L | 0.0000 | |
| 92 | D | L | -2.4104 | |
| 93 | P | L | -1.6441 | |
| 94 | V | L | 0.0000 | |
| 95 | E | L | -1.8306 | |
| 96 | A | L | -1.5170 | |
| 97 | D | L | -2.1332 | |
| 98 | D | L | 0.0000 | |
| 99 | A | L | -1.6584 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -1.1233 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | N | L | -0.6172 | |
| 108 | N | L | -0.9707 | |
| 109 | E | L | -1.6050 | |
| 114 | D | L | -2.1572 | |
| 115 | P | L | 0.0000 | |
| 116 | Y | L | -0.6283 | |
| 117 | T | L | -0.2628 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -1.1214 | |
| 121 | G | L | -0.7437 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.9143 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -1.9623 | |
| 126 | I | L | -1.1348 | |
| 127 | K | L | -1.3508 |