Project name: query_structure

Status: done

Started: 2026-03-16 23:32:05
Settings
Chain sequence(s) A: GSIPCGESCVYIPCISSLLGCSCKSKVCYKD
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:17)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:17)
Show buried residues

Minimal score value
-1.9761
Maximal score value
2.5086
Average score
0.3899
Total score value
12.0868

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.5113
2 S A -0.4938
3 I A 1.0310
4 P A 0.1628
5 C A 0.3584
6 G A -0.0814
7 E A 0.1974
8 S A 0.5554
9 C A 1.1948
10 V A 2.0392
11 Y A 2.3600
12 I A 2.1013
13 P A 1.3218
14 C A 0.0000
15 I A 2.4931
16 S A 1.7098
17 S A 1.4788
18 L A 2.5086
19 L A 2.1815
20 G A 0.3497
21 C A 0.0000
22 S A -0.4889
23 C A -0.3768
24 K A -1.5266
25 S A -1.1409
26 K A -0.9652
27 V A -0.5367
28 C A 0.0000
29 Y A -0.6974
30 K A -1.1617
31 D A -1.9761
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Laboratory of Theory of Biopolymers 2018