Chain sequence(s) |
A: SWNPPTFSPALLVVTEGDNATFTCSFSNTSESFVLNWYRMSPSNQTDKLAAFPEDRSQPGQDSRFRVTQLPNGRDFHMSVVRARRNDSGTYLCGAISLAPKAQIKESLRAELRVTE
H: QVQLVQSGVEVKKPGASVKVSCKASGYTFTNYYMYWVRQAPGQGLEWMGGINPSNGGTNFNEKFKNRVTLTTDSSTTTAYMELKSLQFDDTAVYYCARRDYRFDMGFDYWGQGTTVTVSS L: EIVLTQSPATLSLSPGERATLSCRASKGVSTSGYSYLHWYQQKPGQAPRLLIYLASYLESGVPARFSGSGSGTDFTLTISSLEPEDFAVYYCQHSRDLPLTFGGGTKVEIK input PDB |
Selected Chain(s) | A,H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:01) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01) [INFO] runJob: Creating pdb object from: input.pdb (00:00:01) [INFO] FoldX: Starting FoldX energy minimalization (00:00:01) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:44) [INFO] Main: Simulation completed successfully. (00:02:47) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | S | A | -0.4526 | |
2 | W | A | -0.8789 | |
3 | N | A | -1.5784 | |
4 | P | A | -1.1781 | |
5 | P | A | 0.0000 | |
6 | T | A | -0.4571 | |
7 | F | A | 0.0000 | |
8 | S | A | -0.1365 | |
9 | P | A | 0.2134 | |
10 | A | A | 0.2891 | |
11 | L | A | 1.1080 | |
12 | L | A | 1.0740 | |
13 | V | A | 1.4964 | |
14 | V | A | -0.6752 | |
15 | T | A | -2.0184 | |
16 | E | A | -3.5356 | |
17 | G | A | -3.0412 | |
18 | D | A | -2.7351 | |
19 | N | A | -2.6306 | |
20 | A | A | 0.0000 | |
21 | T | A | -0.5132 | |
22 | F | A | 0.0000 | |
23 | T | A | -0.2922 | |
24 | C | A | 0.0000 | |
25 | S | A | -1.0545 | |
26 | F | A | 0.0000 | |
27 | S | A | -1.5820 | |
28 | N | A | -1.4666 | |
29 | T | A | -1.3307 | |
30 | S | A | -1.3886 | |
31 | E | A | -2.0209 | |
32 | S | A | -0.9479 | |
33 | F | A | -0.3415 | |
34 | V | A | 0.0000 | |
35 | L | A | 0.0000 | |
36 | N | A | 0.0000 | |
37 | W | A | 0.0000 | |
38 | Y | A | 0.0000 | |
39 | R | A | -1.6868 | |
40 | M | A | -1.7063 | |
41 | S | A | -1.3292 | |
42 | P | A | -1.0630 | |
43 | S | A | -1.3067 | |
44 | N | A | -2.1600 | |
45 | Q | A | -2.1590 | |
46 | T | A | -1.3348 | |
47 | D | A | -1.2426 | |
48 | K | A | 0.0000 | |
49 | L | A | 0.0000 | |
50 | A | A | 0.0000 | |
51 | A | A | 0.0000 | |
52 | F | A | 0.1275 | |
53 | P | A | 0.0000 | |
54 | E | A | -0.9983 | |
55 | D | A | 0.0000 | |
56 | R | A | -2.2340 | |
57 | S | A | 0.0000 | |
58 | Q | A | 0.0000 | |
59 | P | A | 0.0000 | |
60 | G | A | -1.5424 | |
61 | Q | A | -1.7957 | |
62 | D | A | -1.9931 | |
63 | S | A | -1.3229 | |
64 | R | A | -1.1986 | |
65 | F | A | -0.8494 | |
66 | R | A | -0.6120 | |
67 | V | A | -0.1949 | |
68 | T | A | -0.3988 | |
69 | Q | A | -1.0064 | |
70 | L | A | -0.9141 | |
71 | P | A | -1.1510 | |
72 | N | A | -1.9584 | |
73 | G | A | -1.9590 | |
74 | R | A | -2.3728 | |
75 | D | A | -1.4776 | |
76 | F | A | 0.0000 | |
77 | H | A | -0.4526 | |
78 | M | A | 0.0000 | |
79 | S | A | -0.7395 | |
80 | V | A | 0.0000 | |
81 | V | A | -1.6241 | |
82 | R | A | -3.1574 | |
83 | A | A | 0.0000 | |
84 | R | A | -4.2729 | |
85 | R | A | -4.0186 | |
86 | N | A | -2.9315 | |
87 | D | A | 0.0000 | |
88 | S | A | -1.8856 | |
89 | G | A | -1.4818 | |
90 | T | A | -1.4309 | |
91 | Y | A | 0.0000 | |
92 | L | A | 0.0000 | |
93 | C | A | 0.0000 | |
94 | G | A | 0.0000 | |
95 | A | A | 0.0000 | |
96 | I | A | 0.0000 | |
97 | S | A | -0.3520 | |
98 | L | A | 0.0000 | |
99 | A | A | -0.4994 | |
100 | P | A | -1.0310 | |
101 | K | A | -1.9409 | |
102 | A | A | -1.1857 | |
103 | Q | A | -1.1828 | |
104 | I | A | -0.3745 | |
105 | K | A | -0.8591 | |
106 | E | A | -0.8827 | |
107 | S | A | -0.3295 | |
108 | L | A | 0.4242 | |
109 | R | A | -1.4081 | |
110 | A | A | 0.0000 | |
111 | E | A | -1.1922 | |
112 | L | A | 0.0000 | |
113 | R | A | -1.5653 | |
114 | V | A | 0.0000 | |
115 | T | A | -2.0800 | |
116 | E | A | -2.6021 | |
117 | Q | H | -1.2237 | |
118 | V | H | -0.3903 | |
119 | Q | H | -0.7039 | |
120 | L | H | 0.0000 | |
121 | V | H | -0.2741 | |
122 | Q | H | 0.0000 | |
123 | S | H | -0.4408 | |
124 | G | H | 0.0547 | |
125 | V | H | 1.3343 | |
126 | E | H | 0.3098 | |
127 | V | H | 0.9719 | |
128 | K | H | -0.7528 | |
129 | K | H | -1.7726 | |
130 | P | H | -1.3751 | |
131 | G | H | -1.3136 | |
132 | A | H | -1.2917 | |
133 | S | H | -1.5675 | |
134 | V | H | 0.0000 | |
135 | K | H | -1.9710 | |
136 | V | H | 0.0000 | |
137 | S | H | -0.6449 | |
138 | C | H | 0.0000 | |
139 | K | H | -0.8571 | |
140 | A | H | 0.0000 | |
141 | S | H | -0.6394 | |
142 | G | H | -0.7924 | |
143 | Y | H | -0.2545 | |
144 | T | H | -0.1931 | |
145 | F | H | 0.0000 | |
146 | T | H | -0.5751 | |
147 | N | H | -0.5467 | |
148 | Y | H | -0.1873 | |
149 | Y | H | 0.0000 | |
150 | M | H | 0.0000 | |
151 | Y | H | 0.0000 | |
152 | W | H | 0.0000 | |
153 | V | H | 0.0000 | |
154 | R | H | 0.0000 | |
155 | Q | H | -0.5016 | |
156 | A | H | -0.6463 | |
157 | P | H | -0.9561 | |
158 | G | H | -0.8715 | |
159 | Q | H | -1.0966 | |
160 | G | H | 0.0000 | |
161 | L | H | 0.0000 | |
162 | E | H | -1.0634 | |
163 | W | H | 0.0000 | |
164 | M | H | 0.0000 | |
165 | G | H | 0.0000 | |
166 | G | H | 0.0000 | |
167 | I | H | 0.0000 | |
168 | N | H | 0.0000 | |
169 | P | H | -0.7953 | |
170 | S | H | -1.0830 | |
171 | N | H | -1.6159 | |
172 | G | H | -1.1401 | |
173 | G | H | -1.1221 | |
174 | T | H | -0.5221 | |
175 | N | H | -0.4991 | |
176 | F | H | -0.9234 | |
177 | N | H | 0.0000 | |
178 | E | H | -3.1624 | |
179 | K | H | -3.2475 | |
180 | F | H | -2.4477 | |
181 | K | H | -3.2481 | |
182 | N | H | -2.9112 | |
183 | R | H | -2.2023 | |
184 | V | H | 0.0000 | |
185 | T | H | -0.9208 | |
186 | L | H | -0.1651 | |
187 | T | H | -0.3486 | |
188 | T | H | -0.6545 | |
189 | D | H | -0.9572 | |
190 | S | H | -0.6916 | |
191 | S | H | -0.5473 | |
192 | T | H | -0.5823 | |
193 | T | H | -0.6444 | |
194 | T | H | 0.0000 | |
195 | A | H | 0.0000 | |
196 | Y | H | -0.4735 | |
197 | M | H | 0.0000 | |
198 | E | H | -1.5023 | |
199 | L | H | 0.0000 | |
200 | K | H | -1.8739 | |
201 | S | H | -1.5758 | |
202 | L | H | 0.0000 | |
203 | Q | H | -1.3255 | |
204 | F | H | 0.2318 | |
205 | D | H | -1.2288 | |
206 | D | H | 0.0000 | |
207 | T | H | -0.1343 | |
208 | A | H | -0.0088 | |
209 | V | H | 0.3479 | |
210 | Y | H | 0.0000 | |
211 | Y | H | 0.0000 | |
212 | C | H | 0.0000 | |
213 | A | H | 0.0000 | |
214 | R | H | 0.0000 | |
215 | R | H | 0.0000 | |
216 | D | H | -0.4769 | |
217 | Y | H | 0.0000 | |
218 | R | H | -0.4117 | |
219 | F | H | 0.0000 | |
220 | D | H | 0.0000 | |
221 | M | H | 0.0684 | |
222 | G | H | 0.0000 | |
223 | F | H | 0.0000 | |
224 | D | H | -0.3892 | |
225 | Y | H | 0.0875 | |
226 | W | H | 0.0000 | |
227 | G | H | 0.0000 | |
228 | Q | H | -1.1847 | |
229 | G | H | -0.3938 | |
230 | T | H | 0.0000 | |
231 | T | H | 0.5233 | |
232 | V | H | 0.0000 | |
233 | T | H | 0.5157 | |
234 | V | H | 0.0000 | |
235 | S | H | -0.2961 | |
236 | S | H | -0.5960 | |
237 | E | L | -1.5763 | |
238 | I | L | -0.2918 | |
239 | V | L | 0.4747 | |
240 | L | L | 0.0000 | |
241 | T | L | -0.5618 | |
242 | Q | L | -0.9133 | |
243 | S | L | -0.6965 | |
244 | P | L | -0.3694 | |
245 | A | L | -0.3333 | |
246 | T | L | -0.4820 | |
247 | L | L | -0.3031 | |
248 | S | L | -0.4402 | |
249 | L | L | -0.7158 | |
250 | S | L | -1.0043 | |
251 | P | L | -1.4581 | |
252 | G | L | -1.8022 | |
253 | E | L | -2.2519 | |
254 | R | L | -2.5279 | |
255 | A | L | 0.0000 | |
256 | T | L | -0.5060 | |
257 | L | L | 0.0000 | |
258 | S | L | -1.0055 | |
259 | C | L | 0.0000 | |
260 | R | L | -2.3570 | |
261 | A | L | 0.0000 | |
262 | S | L | -1.3517 | |
263 | K | L | -2.0713 | |
264 | G | L | -1.2675 | |
265 | V | L | 0.0000 | |
266 | S | L | -0.7749 | |
267 | T | L | -0.5959 | |
268 | S | L | -0.6971 | |
269 | G | L | -1.0421 | |
270 | Y | L | -0.7096 | |
271 | S | L | -0.5511 | |
272 | Y | L | 0.0000 | |
273 | L | L | 0.0000 | |
274 | H | L | 0.0000 | |
275 | W | L | 0.0000 | |
276 | Y | L | 0.0000 | |
277 | Q | L | 0.0000 | |
278 | Q | L | 0.0000 | |
279 | K | L | -1.6028 | |
280 | P | L | -1.1224 | |
281 | G | L | -1.3610 | |
282 | Q | L | -2.0085 | |
283 | A | L | -1.3057 | |
284 | P | L | 0.0000 | |
285 | R | L | -1.3717 | |
286 | L | L | 0.0000 | |
287 | L | L | 0.0000 | |
288 | I | L | 0.0000 | |
289 | Y | L | 0.0000 | |
290 | L | L | 0.0000 | |
291 | A | L | -0.1565 | |
292 | S | L | -0.1783 | |
293 | Y | L | 0.3231 | |
294 | L | L | 0.3215 | |
295 | E | L | -0.5016 | |
296 | S | L | -0.7239 | |
297 | G | L | -0.4791 | |
298 | V | L | -0.2438 | |
299 | P | L | -0.2024 | |
300 | A | L | -0.1409 | |
301 | R | L | -0.7194 | |
302 | F | L | 0.0000 | |
303 | S | L | -0.2145 | |
304 | G | L | -0.2977 | |
305 | S | L | -0.8079 | |
306 | G | L | -1.3291 | |
307 | S | L | -1.2371 | |
308 | G | L | -1.6197 | |
309 | T | L | -2.0191 | |
310 | D | L | -2.9293 | |
311 | F | L | 0.0000 | |
312 | T | L | -1.0014 | |
313 | L | L | 0.0000 | |
314 | T | L | -0.5885 | |
315 | I | L | 0.0000 | |
316 | S | L | -1.3955 | |
317 | S | L | -1.8006 | |
318 | L | L | 0.0000 | |
319 | E | L | -2.1844 | |
320 | P | L | -1.4746 | |
321 | E | L | -2.4027 | |
322 | D | L | 0.0000 | |
323 | F | L | 0.0000 | |
324 | A | L | 0.0000 | |
325 | V | L | 0.0000 | |
326 | Y | L | 0.0000 | |
327 | Y | L | 0.0000 | |
328 | C | L | 0.0000 | |
329 | Q | L | 0.0000 | |
330 | H | L | 0.0000 | |
331 | S | L | 0.0000 | |
332 | R | L | 0.0000 | |
333 | D | L | -0.7443 | |
334 | L | L | -0.2508 | |
335 | P | L | -0.6488 | |
336 | L | L | 0.0000 | |
337 | T | L | -0.0697 | |
338 | F | L | 0.0000 | |
339 | G | L | -0.3535 | |
340 | G | L | -0.5345 | |
341 | G | L | 0.0000 | |
342 | T | L | 0.0000 | |
343 | K | L | -1.0407 | |
344 | V | L | 0.0000 | |
345 | E | L | -0.7030 | |
346 | I | L | 0.6371 | |
347 | K | L | -0.9935 |