| Chain sequence(s) |
A: CGPGRFQCESGQCIPATWVCDGENDCVDDSDEKSCATTAPTCLPDQFQCHDYRRCIPLGWVCDGVPDCVDNSDEANCEPPT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:36)
[INFO] Main: Simulation completed successfully. (00:00:36)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | -0.3660 | |
| 2 | G | A | -0.8426 | |
| 3 | P | A | -0.9454 | |
| 4 | G | A | -1.3416 | |
| 5 | R | A | -1.6868 | |
| 6 | F | A | -1.0159 | |
| 7 | Q | A | -1.8656 | |
| 8 | C | A | 0.0000 | |
| 9 | E | A | -2.7014 | |
| 10 | S | A | -1.6608 | |
| 11 | G | A | -1.5012 | |
| 12 | Q | A | -1.4167 | |
| 13 | C | A | -1.0453 | |
| 14 | I | A | 0.0000 | |
| 15 | P | A | -0.5386 | |
| 16 | A | A | -0.6748 | |
| 17 | T | A | -0.1088 | |
| 18 | W | A | -0.5719 | |
| 19 | V | A | -1.2028 | |
| 20 | C | A | -1.9034 | |
| 21 | D | A | -2.6648 | |
| 22 | G | A | -2.2772 | |
| 23 | E | A | -3.2160 | |
| 24 | N | A | -2.9709 | |
| 25 | D | A | -1.7496 | |
| 26 | C | A | 0.0000 | |
| 27 | V | A | 0.1880 | |
| 28 | D | A | -1.6009 | |
| 29 | D | A | -2.5060 | |
| 30 | S | A | 0.0000 | |
| 31 | D | A | 0.0000 | |
| 32 | E | A | -2.5583 | |
| 33 | K | A | -2.5477 | |
| 34 | S | A | -1.2936 | |
| 35 | C | A | -0.7911 | |
| 36 | A | A | -0.4646 | |
| 37 | T | A | -0.2915 | |
| 38 | T | A | -0.1274 | |
| 39 | A | A | -0.1342 | |
| 40 | P | A | -0.3235 | |
| 41 | T | A | -0.2167 | |
| 42 | C | A | -0.2096 | |
| 43 | L | A | 0.7984 | |
| 44 | P | A | -0.2839 | |
| 45 | D | A | -1.1582 | |
| 46 | Q | A | -0.3834 | |
| 47 | F | A | -0.0937 | |
| 48 | Q | A | -0.8890 | |
| 49 | C | A | 0.0000 | |
| 50 | H | A | -1.9311 | |
| 51 | D | A | -1.9594 | |
| 52 | Y | A | -0.7308 | |
| 53 | R | A | -1.9264 | |
| 54 | R | A | -2.1425 | |
| 55 | C | A | -0.8998 | |
| 56 | I | A | 0.0000 | |
| 57 | P | A | 0.0455 | |
| 58 | L | A | 0.6483 | |
| 59 | G | A | -0.0959 | |
| 60 | W | A | 0.5372 | |
| 61 | V | A | 0.2612 | |
| 62 | C | A | -0.6103 | |
| 63 | D | A | -1.0911 | |
| 64 | G | A | -0.5059 | |
| 65 | V | A | 0.4743 | |
| 66 | P | A | 0.0066 | |
| 67 | D | A | -0.1266 | |
| 68 | C | A | 0.0000 | |
| 69 | V | A | 0.6273 | |
| 70 | D | A | -0.7748 | |
| 71 | N | A | -1.0490 | |
| 72 | S | A | -1.1208 | |
| 73 | D | A | 0.0000 | |
| 74 | E | A | -1.1538 | |
| 75 | A | A | -1.2282 | |
| 76 | N | A | -1.7609 | |
| 77 | C | A | -1.5413 | |
| 78 | E | A | -2.2432 | |
| 79 | P | A | -1.3502 | |
| 80 | P | A | -0.8467 | |
| 81 | T | A | -0.5514 |