| Chain sequence(s) |
A: MDVFMKGLSKAKEGVVAAAEKTKQGVAEAAGKTKEGVLYVGSKTKEGVVGVATVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGSIAAATGFVKKDQLGKNEEGAPQEGILEDMPVDPDNEAYEMPSEEGYQDYEPEA
B: MPQLNPAPWLSILVFSWLVFLIILPPKVMATYPNEPTPQSTEKPKGEPWNWPW input PDB |
| Selected Chain(s) | A,B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:43)
[INFO] Main: Simulation completed successfully. (00:05:45)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.2476 | |
| 2 | D | A | 0.0029 | |
| 3 | V | A | 1.7942 | |
| 4 | F | A | 2.2375 | |
| 5 | M | A | 0.9009 | |
| 6 | K | A | -1.0195 | |
| 7 | G | A | -0.6368 | |
| 8 | L | A | -0.4171 | |
| 9 | S | A | -1.5289 | |
| 10 | K | A | -2.5870 | |
| 11 | A | A | -1.5888 | |
| 12 | K | A | -2.1763 | |
| 13 | E | A | -2.1475 | |
| 14 | G | A | -0.9316 | |
| 15 | V | A | 0.6432 | |
| 16 | V | A | 0.5365 | |
| 17 | A | A | -0.6868 | |
| 18 | A | A | -0.8093 | |
| 19 | A | A | -1.1361 | |
| 20 | E | A | -2.7031 | |
| 21 | K | A | -2.9110 | |
| 22 | T | A | -2.2545 | |
| 23 | K | A | -3.1935 | |
| 24 | Q | A | -3.0779 | |
| 25 | G | A | -1.8082 | |
| 26 | V | A | -0.2218 | |
| 27 | A | A | -1.2654 | |
| 28 | E | A | -2.3862 | |
| 29 | A | A | -1.5646 | |
| 30 | A | A | -1.4582 | |
| 31 | G | A | -2.4161 | |
| 32 | K | A | -3.0272 | |
| 33 | T | A | -1.7787 | |
| 34 | K | A | -2.2249 | |
| 35 | E | A | -1.7156 | |
| 36 | G | A | 0.1032 | |
| 37 | V | A | 1.7346 | |
| 38 | L | A | 1.8348 | |
| 39 | Y | A | 1.8990 | |
| 40 | V | A | 2.1294 | |
| 41 | G | A | 0.7386 | |
| 42 | S | A | 0.3132 | |
| 43 | K | A | -0.8358 | |
| 44 | T | A | -0.4322 | |
| 45 | K | A | -1.1094 | |
| 46 | E | A | -0.5372 | |
| 47 | G | A | -0.4048 | |
| 48 | V | A | 1.3952 | |
| 49 | V | A | 1.4349 | |
| 51 | G | A | 0.8271 | |
| 52 | V | A | 2.4804 | |
| 53 | A | A | 1.0543 | |
| 54 | T | A | -0.0500 | |
| 55 | V | A | 0.3689 | |
| 56 | A | A | -0.6246 | |
| 57 | E | A | -2.4417 | |
| 58 | K | A | -2.6384 | |
| 59 | T | A | -1.9206 | |
| 60 | K | A | -3.0483 | |
| 61 | E | A | -3.4045 | |
| 62 | Q | A | -2.3811 | |
| 63 | V | A | -0.3764 | |
| 64 | T | A | -1.0156 | |
| 65 | N | A | -1.5953 | |
| 66 | V | A | 0.4491 | |
| 67 | G | A | 0.9406 | |
| 68 | G | A | 0.5558 | |
| 69 | A | A | 0.7562 | |
| 70 | V | A | 2.5897 | |
| 71 | V | A | 3.1918 | |
| 72 | T | A | 1.6256 | |
| 73 | G | A | 1.8598 | |
| 74 | V | A | 3.0769 | |
| 75 | T | A | 1.5718 | |
| 76 | A | A | 1.3389 | |
| 77 | V | A | 1.9260 | |
| 78 | A | A | 0.7148 | |
| 79 | Q | A | -0.5377 | |
| 80 | K | A | -0.4626 | |
| 81 | T | A | 0.0357 | |
| 82 | V | A | 0.9466 | |
| 83 | E | A | -0.4622 | |
| 84 | G | A | 0.2254 | |
| 85 | A | A | 0.6423 | |
| 86 | G | A | 0.6989 | |
| 87 | S | A | 0.0000 | |
| 88 | I | A | 2.7119 | |
| 89 | A | A | 1.7398 | |
| 90 | A | A | 2.5291 | |
| 91 | A | A | 3.0991 | |
| 92 | T | A | 2.3096 | |
| 93 | G | A | 0.0000 | |
| 94 | F | A | 2.1638 | |
| 95 | V | A | 0.3128 | |
| 96 | K | A | -1.8732 | |
| 97 | K | A | -2.2074 | |
| 98 | D | A | -1.9771 | |
| 99 | Q | A | -1.6552 | |
| 100 | L | A | -0.1238 | |
| 101 | G | A | -1.1682 | |
| 102 | K | A | -2.8105 | |
| 103 | N | A | -3.5965 | |
| 104 | E | A | -4.0088 | |
| 105 | E | A | -3.5758 | |
| 106 | G | A | -2.2892 | |
| 107 | A | A | -1.6151 | |
| 108 | P | A | -1.8474 | |
| 109 | Q | A | -2.1233 | |
| 110 | E | A | -2.0283 | |
| 111 | G | A | -0.6195 | |
| 112 | I | A | 0.9260 | |
| 113 | L | A | 0.9064 | |
| 114 | E | A | -1.3124 | |
| 115 | D | A | -1.2542 | |
| 116 | M | A | 0.0469 | |
| 117 | P | A | -0.3035 | |
| 118 | V | A | 0.2340 | |
| 119 | D | A | -2.2095 | |
| 120 | P | A | -2.2856 | |
| 121 | D | A | -3.4685 | |
| 122 | N | A | -3.1333 | |
| 123 | E | A | -3.1145 | |
| 124 | A | A | -1.3157 | |
| 125 | Y | A | -0.0198 | |
| 126 | E | A | -1.0016 | |
| 127 | M | A | 0.1090 | |
| 128 | P | A | -0.9955 | |
| 129 | S | A | -1.9004 | |
| 130 | E | A | -2.5295 | |
| 131 | E | A | -2.8768 | |
| 132 | G | A | -1.9644 | |
| 133 | Y | A | -0.6980 | |
| 134 | Q | A | -1.7351 | |
| 135 | D | A | -1.9948 | |
| 136 | Y | A | -0.9252 | |
| 137 | E | A | -2.5261 | |
| 138 | P | A | -1.8755 | |
| 139 | E | A | -2.2304 | |
| 140 | A | A | -1.1562 | |
| 1 | M | B | 0.6187 | |
| 2 | P | B | -0.2314 | |
| 3 | Q | B | -0.9940 | |
| 4 | L | B | -0.2010 | |
| 5 | N | B | -0.9228 | |
| 6 | P | B | -0.4159 | |
| 7 | A | B | -0.0059 | |
| 8 | P | B | 0.0984 | |
| 9 | W | B | 0.9399 | |
| 10 | L | B | 2.5700 | |
| 11 | S | B | 1.7997 | |
| 12 | I | B | 1.9910 | |
| 13 | L | B | 2.5168 | |
| 14 | V | B | 3.3195 | |
| 15 | F | B | 3.4379 | |
| 16 | S | B | 3.0336 | |
| 17 | W | B | 3.5940 | |
| 18 | L | B | 3.8361 | |
| 19 | V | B | 3.4726 | |
| 20 | F | B | 3.0876 | |
| 21 | L | B | 3.3906 | |
| 22 | I | B | 3.5392 | |
| 23 | I | B | 2.7837 | |
| 24 | L | B | 1.2436 | |
| 25 | P | B | 0.7041 | |
| 26 | P | B | 0.2568 | |
| 27 | K | B | -0.8484 | |
| 28 | V | B | -0.4813 | |
| 29 | M | B | 0.4592 | |
| 30 | A | B | 0.1321 | |
| 32 | T | B | 0.3095 | |
| 33 | Y | B | 0.2661 | |
| 34 | P | B | -0.6952 | |
| 35 | N | B | -1.5025 | |
| 36 | E | B | -2.0252 | |
| 37 | P | B | -1.0714 | |
| 38 | T | B | -1.2971 | |
| 39 | P | B | -1.0200 | |
| 40 | Q | B | -1.4764 | |
| 41 | S | B | -1.4869 | |
| 42 | T | B | -1.8174 | |
| 43 | E | B | -3.1463 | |
| 44 | K | B | -3.0934 | |
| 45 | P | B | -2.7108 | |
| 46 | K | B | -3.0086 | |
| 47 | G | B | -1.7469 | |
| 48 | E | B | -1.9561 | |
| 49 | P | B | -0.7676 | |
| 50 | W | B | -0.0935 | |
| 51 | N | B | -1.1979 | |
| 52 | W | B | 0.0961 | |
| 53 | P | B | 0.1519 | |
| 54 | W | B | 1.0265 |