| Chain sequence(s) |
A: EDEDEDEDEDED
C: EDEDEDEDEDED B: EDEDEDEDEDED D: EDEDEDEDEDED input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:43)
[INFO] Main: Simulation completed successfully. (00:00:44)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -3.6065 | |
| 2 | D | A | -4.4433 | |
| 3 | E | A | -4.6839 | |
| 4 | D | A | -4.9604 | |
| 5 | E | A | -4.8239 | |
| 6 | D | A | -5.4575 | |
| 7 | E | A | -5.4983 | |
| 8 | D | A | -6.1034 | |
| 9 | E | A | -6.2576 | |
| 10 | D | A | -6.8998 | |
| 11 | E | A | -6.4835 | |
| 12 | D | A | -6.0373 | |
| 1 | E | B | -3.6679 | |
| 2 | D | B | -5.0654 | |
| 3 | E | B | -4.8406 | |
| 4 | D | B | -5.0018 | |
| 5 | E | B | -4.8416 | |
| 6 | D | B | -5.5214 | |
| 7 | E | B | -5.6192 | |
| 8 | D | B | -6.0968 | |
| 9 | E | B | -6.3590 | |
| 10 | D | B | -6.6688 | |
| 11 | E | B | -6.4310 | |
| 12 | D | B | -6.3183 | |
| 1 | E | C | -5.0566 | |
| 2 | D | C | -4.9649 | |
| 3 | E | C | -4.7750 | |
| 4 | D | C | -4.8853 | |
| 5 | E | C | -4.5444 | |
| 6 | D | C | -4.7501 | |
| 7 | E | C | -4.5912 | |
| 8 | D | C | -4.7816 | |
| 9 | E | C | -4.7939 | |
| 10 | D | C | -4.6209 | |
| 11 | E | C | -4.1228 | |
| 12 | D | C | -3.2390 | |
| 1 | E | D | -4.3300 | |
| 2 | D | D | -4.4964 | |
| 3 | E | D | -4.1710 | |
| 4 | D | D | -4.1520 | |
| 5 | E | D | -4.2015 | |
| 6 | D | D | -4.1859 | |
| 7 | E | D | -4.1571 | |
| 8 | D | D | -4.1277 | |
| 9 | E | D | -4.0915 | |
| 10 | D | D | -4.0848 | |
| 11 | E | D | -3.7242 | |
| 12 | D | D | -2.8348 |