| Chain sequence(s) |
A: GHHHHHHGGPEVRAERYIPAPPERVYKLAKDLEGLKPYLKEVESLEVVAREGARTRSRWVAVAMGKKVRWLEEEEWDDENLRNRFFSPEGDFDRYEGTWVFLPEGEGTRVVLTLTYELTIPIFGGLLRKLVQKLMQENVESLLKGLESYVLAHSDAYN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | IE122A,LD126A |
| Energy difference between WT (input) and mutated protein (by FoldX) | -1.91605 kcal/mol |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] FoldX: Building mutant model (00:01:15)
[INFO] FoldX: Starting FoldX energy minimalization (00:01:20)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:34)
[INFO] Main: Simulation completed successfully. (00:02:35)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.6489 | |
| 2 | H | A | -1.2610 | |
| 3 | H | A | -1.3592 | |
| 4 | H | A | -1.3576 | |
| 5 | H | A | -1.3589 | |
| 6 | H | A | -1.3961 | |
| 7 | H | A | -1.2406 | |
| 8 | G | A | -0.6809 | |
| 9 | G | A | -0.1534 | |
| 10 | P | A | -0.4474 | |
| 11 | E | A | -1.8398 | |
| 12 | V | A | 0.0000 | |
| 13 | R | A | -1.6200 | |
| 14 | A | A | 0.0000 | |
| 15 | E | A | -0.9586 | |
| 16 | R | A | -0.6116 | |
| 17 | Y | A | 0.7421 | |
| 18 | I | A | 0.0000 | |
| 19 | P | A | -0.2091 | |
| 20 | A | A | 0.0000 | |
| 21 | P | A | -0.1761 | |
| 22 | P | A | 0.0000 | |
| 23 | E | A | -1.8713 | |
| 24 | R | A | -0.7889 | |
| 25 | V | A | 0.0000 | |
| 26 | Y | A | 0.0000 | |
| 27 | K | A | -1.7289 | |
| 28 | L | A | 0.0000 | |
| 29 | A | A | 0.0000 | |
| 30 | K | A | -0.4913 | |
| 31 | D | A | -0.8062 | |
| 32 | L | A | 0.0000 | |
| 33 | E | A | -1.8382 | |
| 34 | G | A | -0.4290 | |
| 35 | L | A | 0.0000 | |
| 36 | K | A | -0.3322 | |
| 37 | P | A | -0.2463 | |
| 38 | Y | A | 0.2852 | |
| 39 | L | A | 0.0000 | |
| 40 | K | A | -1.8609 | |
| 41 | E | A | -1.1952 | |
| 42 | V | A | 0.0000 | |
| 43 | E | A | -1.8508 | |
| 44 | S | A | -0.4985 | |
| 45 | L | A | 0.0000 | |
| 46 | E | A | -1.7607 | |
| 47 | V | A | 0.0782 | |
| 48 | V | A | 0.5527 | |
| 49 | A | A | -0.1700 | |
| 50 | R | A | -1.8246 | |
| 51 | E | A | -2.1754 | |
| 52 | G | A | -0.7884 | |
| 53 | A | A | -0.3692 | |
| 54 | R | A | -2.0492 | |
| 55 | T | A | 0.0000 | |
| 56 | R | A | -0.8958 | |
| 57 | S | A | 0.0000 | |
| 58 | R | A | -1.8441 | |
| 59 | W | A | 0.0000 | |
| 60 | V | A | 0.0894 | |
| 61 | A | A | 0.0000 | |
| 62 | V | A | 0.3510 | |
| 63 | A | A | 0.2970 | |
| 64 | M | A | 0.9711 | |
| 65 | G | A | -0.5591 | |
| 66 | K | A | -1.9755 | |
| 67 | K | A | -1.9219 | |
| 68 | V | A | 0.0000 | |
| 69 | R | A | -1.8028 | |
| 70 | W | A | 0.0000 | |
| 71 | L | A | 0.0000 | |
| 72 | E | A | 0.0000 | |
| 73 | E | A | -0.6579 | |
| 74 | E | A | 0.0000 | |
| 75 | E | A | -1.9785 | |
| 76 | W | A | 0.0000 | |
| 77 | D | A | -1.0916 | |
| 78 | D | A | -2.2522 | |
| 79 | E | A | -2.2801 | |
| 80 | N | A | -1.0853 | |
| 81 | L | A | -0.0920 | |
| 82 | R | A | -0.6644 | |
| 83 | N | A | 0.0000 | |
| 84 | R | A | -1.8454 | |
| 85 | F | A | 0.0000 | |
| 86 | F | A | 0.9322 | |
| 87 | S | A | 0.1406 | |
| 88 | P | A | -0.4748 | |
| 89 | E | A | -1.9309 | |
| 90 | G | A | -0.8883 | |
| 91 | D | A | -0.5773 | |
| 92 | F | A | 0.0000 | |
| 93 | D | A | -1.8813 | |
| 94 | R | A | -0.9632 | |
| 95 | Y | A | 0.0000 | |
| 96 | E | A | -0.4568 | |
| 97 | G | A | -0.1974 | |
| 98 | T | A | -0.2535 | |
| 99 | W | A | 0.1502 | |
| 100 | V | A | 0.1158 | |
| 101 | F | A | 0.0000 | |
| 102 | L | A | 0.5569 | |
| 103 | P | A | -0.2823 | |
| 104 | E | A | -0.8846 | |
| 105 | G | A | -0.9283 | |
| 106 | E | A | -1.9034 | |
| 107 | G | A | 0.0000 | |
| 108 | T | A | 0.0000 | |
| 109 | R | A | -0.7605 | |
| 110 | V | A | 0.0000 | |
| 111 | V | A | 0.0000 | |
| 112 | L | A | 0.0000 | |
| 113 | T | A | -0.2223 | |
| 114 | L | A | 0.0000 | |
| 115 | T | A | -0.2654 | |
| 116 | Y | A | 0.0000 | |
| 117 | E | A | -1.1360 | |
| 118 | L | A | 0.0272 | |
| 119 | T | A | 0.0483 | |
| 120 | I | A | 0.3549 | |
| 121 | P | A | -0.5049 | |
| 122 | E | A | -1.6779 | mutated: IE122A |
| 123 | F | A | 0.6631 | |
| 124 | G | A | -0.1814 | |
| 125 | G | A | -0.8375 | |
| 126 | D | A | -1.8201 | mutated: LD126A |
| 127 | L | A | -0.2987 | |
| 128 | R | A | -2.0976 | |
| 129 | K | A | -1.9234 | |
| 130 | L | A | 0.3130 | |
| 131 | V | A | 0.0000 | |
| 132 | Q | A | -0.6866 | |
| 133 | K | A | -1.4327 | |
| 134 | L | A | 0.0106 | |
| 135 | M | A | 0.0000 | |
| 136 | Q | A | -0.5229 | |
| 137 | E | A | -1.6827 | |
| 138 | N | A | -0.5245 | |
| 139 | V | A | 0.0000 | |
| 140 | E | A | -0.8770 | |
| 141 | S | A | -0.2881 | |
| 142 | L | A | 0.1545 | |
| 143 | L | A | 0.0000 | |
| 144 | K | A | -1.0854 | |
| 145 | G | A | 0.0000 | |
| 146 | L | A | 0.0000 | |
| 147 | E | A | -0.5209 | |
| 148 | S | A | -0.1360 | |
| 149 | Y | A | 0.0000 | |
| 150 | V | A | 0.0000 | |
| 151 | L | A | 0.8345 | |
| 152 | A | A | 0.0947 | |
| 153 | H | A | -0.6396 | |
| 154 | S | A | -0.6026 | |
| 155 | D | A | -1.8069 | |
| 156 | A | A | -0.0289 | |
| 157 | Y | A | 1.0782 | |
| 158 | N | A | -1.0166 |