Project name: 15_x11e6_i14e7_i20e6_x4e7

Status: done

Started: 2025-08-11 19:12:29
Settings
Chain sequence(s) A: GPGPGAEKLRHLNEKRRFHNGPGPGLDKKQRFHNIRGRWTGPGPGNPAEKLRHLNEKRRFGPGPGSKISEYRHYCYSLYGGPGPGRAHYNIVTFAAYTLQDIVLHLAAYLLMGTLGIVAAYLPARRAEPQAAYVYDFAFRDLAAYRFHNIAGHYAAYCYSLYGTTLAAYKTVLELTEVAAYLLCHEQLSDSEEENDGPGPGQSTHVDIRTLEDLLMGPGPGTPTLHEYMLDLQPETGPGPGLQDIVLHLEPQNEIPGPGPG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:04:00)
[INFO]       Main:     Simulation completed successfully.                                          (00:04:02)
Show buried residues

Minimal score value
-4.6453
Maximal score value
3.0395
Average score
-0.5837
Total score value
-152.3451

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.7383
2 P A -1.0132
3 G A -1.1639
4 P A -1.3537
5 G A -1.5266
6 A A -1.8818
7 E A -3.1918
8 K A -2.7979
9 L A -1.4403
10 R A -3.4260
11 H A -3.4148
12 L A -2.3359
13 N A -3.1718
14 E A -4.1169
15 K A -4.1038
16 R A -4.2408
17 R A -3.7427
18 F A -1.4852
19 H A -2.5520
20 N A -2.6829
21 G A -1.7541
22 P A -1.0716
23 G A -0.9945
24 P A -0.6319
25 G A -0.6436
26 L A -0.8154
27 D A -2.9282
28 K A -3.6140
29 K A -3.6169
30 Q A -3.1646
31 R A -3.1175
32 F A -1.2412
33 H A -2.6164
34 N A -2.5480
35 I A -1.0122
36 R A -2.2296
37 G A -2.0009
38 R A -2.2102
39 W A -0.4393
40 T A -0.7440
41 G A -0.8900
42 P A -0.6301
43 G A -1.0456
44 P A -1.0789
45 G A -1.6954
46 N A -2.1188
47 P A -1.7021
48 A A -1.6425
49 E A -2.5458
50 K A -2.5130
51 L A -1.0197
52 R A -3.0699
53 H A -3.1715
54 L A -2.0312
55 N A -3.1332
56 E A -4.0579
57 K A -3.9281
58 R A -3.7942
59 R A -3.0865
60 F A -0.6962
61 G A -0.9502
62 P A -0.8053
63 G A -0.7589
64 P A -1.0311
65 G A -1.1614
66 S A -0.9159
67 K A -1.4657
68 I A 0.3952
69 S A -0.9130
70 E A -1.7598
71 Y A 0.2408
72 R A -0.8834
73 H A -0.5490
74 Y A 0.9335
75 C A 1.1252
76 Y A 1.7003
77 S A 1.0601
78 L A 2.0043
79 Y A 1.9965
80 G A 0.4378
81 G A -0.3371
82 P A -0.7587
83 G A -1.2248
84 P A -1.2584
85 G A -1.7412
86 R A -2.2587
87 A A -1.2503
88 H A -0.9566
89 Y A 1.0057
90 N A 0.9026
91 I A 2.8234
92 V A 3.0197
93 T A 2.2587
94 F A 2.6967
95 A A 1.8086
96 A A 1.4551
97 Y A 1.5893
98 T A 1.0777
99 L A 1.0602
100 Q A 0.2100
101 D A -0.4536
102 I A 1.1026
103 V A 2.1254
104 L A 1.6927
105 H A 0.7663
106 L A 1.9401
107 A A 1.8794
108 A A 1.9176
109 Y A 2.4510
110 L A 2.2694
111 L A 2.4079
112 M A 2.6807
113 G A 1.8343
114 T A 2.1144
115 L A 2.8230
116 G A 1.5793
117 I A 2.3382
118 V A 2.6497
119 A A 1.6062
120 A A 1.0711
121 Y A 0.8631
122 L A 0.5191
123 P A -0.7540
124 A A -1.2776
125 R A -2.7834
126 R A -2.9235
127 A A -2.1792
128 E A -2.7648
129 P A -1.9427
130 Q A -1.1687
131 A A -0.3443
132 A A 0.0000
133 Y A 1.8153
134 V A 3.0395
135 Y A 2.0242
136 D A 1.7418
137 F A 2.3383
138 A A 1.2517
139 F A 1.0875
140 R A -0.9957
141 D A -1.1012
142 L A -0.0463
143 A A -0.2005
144 A A -0.2351
145 Y A 0.2557
146 R A -0.7509
147 F A 0.6917
148 H A -0.4451
149 N A -0.7371
150 I A 0.1820
151 A A 0.1481
152 G A -0.6363
153 H A -0.3394
154 Y A 0.5288
155 A A 0.9291
156 A A 1.0168
157 Y A 1.9248
158 C A 1.8388
159 Y A 2.1890
160 S A 1.5618
161 L A 2.1419
162 Y A 2.0323
163 G A 0.8525
164 T A 0.9318
165 T A 0.9615
166 L A 1.3741
167 A A 0.4876
168 A A 0.6048
169 Y A 0.7260
170 K A -0.8960
171 T A -0.3329
172 V A 0.0369
173 L A -0.4037
174 E A -1.4341
175 L A 0.3773
176 T A -0.2546
177 E A -1.1165
178 V A 0.4428
179 A A 0.6679
180 A A 0.5713
181 Y A 0.8512
182 L A 0.7546
183 L A 1.2575
184 C A 0.8152
185 H A -0.5661
186 E A -1.7730
187 Q A -1.5640
188 L A -0.7162
189 S A -2.2677
190 D A -3.5342
191 S A -2.9991
192 E A -4.2087
193 E A -4.6453
194 E A -4.6032
195 N A -4.1251
196 D A -3.6848
197 G A -2.3369
198 P A -1.3646
199 G A -1.3507
200 P A -1.1678
201 G A -1.4236
202 Q A -1.8398
203 S A -1.3050
204 T A -1.0666
205 H A -0.9780
206 V A -0.0293
207 D A -0.6205
208 I A 0.2720
209 R A -1.7445
210 T A -1.0255
211 L A -0.1976
212 E A -1.4777
213 D A -1.7422
214 L A 0.0919
215 L A 0.9857
216 M A 0.7583
217 G A 0.0574
218 P A -0.4739
219 G A -0.7834
220 P A -0.7393
221 G A -0.7958
222 T A -0.9730
223 P A -1.0399
224 T A -0.6116
225 L A 0.0711
226 H A -1.2161
227 E A -1.5589
228 Y A -0.6648
229 M A -0.1182
230 L A -0.6051
231 D A -1.8775
232 L A -0.6804
233 Q A -1.7084
234 P A -1.9034
235 E A -2.5418
236 T A -1.5736
237 G A -1.4288
238 P A -1.2373
239 G A -1.2547
240 P A -0.6629
241 G A -0.1169
242 L A 1.3749
243 Q A 0.0944
244 D A 0.2208
245 I A 1.7002
246 V A 2.3834
247 L A 1.5867
248 H A 0.1938
249 L A 1.0966
250 E A -1.0980
251 P A -1.9678
252 Q A -2.5856
253 N A -2.5161
254 E A -2.0145
255 I A 0.2759
256 P A -0.3490
257 G A -0.5913
258 P A -0.6500
259 G A -1.0000
260 P A -0.8271
261 G A -0.7487
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Laboratory of Theory of Biopolymers 2018