Chain sequence(s) |
A: GPGPGAEKLRHLNEKRRFHNGPGPGLDKKQRFHNIRGRWTGPGPGNPAEKLRHLNEKRRFGPGPGSKISEYRHYCYSLYGGPGPGRAHYNIVTFAAYTLQDIVLHLAAYLLMGTLGIVAAYLPARRAEPQAAYVYDFAFRDLAAYRFHNIAGHYAAYCYSLYGTTLAAYKTVLELTEVAAYLLCHEQLSDSEEENDGPGPGQSTHVDIRTLEDLLMGPGPGTPTLHEYMLDLQPETGPGPGLQDIVLHLEPQNEIPGPGPG
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:00) [INFO] Main: Simulation completed successfully. (00:04:02) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | G | A | -0.7383 | |
2 | P | A | -1.0132 | |
3 | G | A | -1.1639 | |
4 | P | A | -1.3537 | |
5 | G | A | -1.5266 | |
6 | A | A | -1.8818 | |
7 | E | A | -3.1918 | |
8 | K | A | -2.7979 | |
9 | L | A | -1.4403 | |
10 | R | A | -3.4260 | |
11 | H | A | -3.4148 | |
12 | L | A | -2.3359 | |
13 | N | A | -3.1718 | |
14 | E | A | -4.1169 | |
15 | K | A | -4.1038 | |
16 | R | A | -4.2408 | |
17 | R | A | -3.7427 | |
18 | F | A | -1.4852 | |
19 | H | A | -2.5520 | |
20 | N | A | -2.6829 | |
21 | G | A | -1.7541 | |
22 | P | A | -1.0716 | |
23 | G | A | -0.9945 | |
24 | P | A | -0.6319 | |
25 | G | A | -0.6436 | |
26 | L | A | -0.8154 | |
27 | D | A | -2.9282 | |
28 | K | A | -3.6140 | |
29 | K | A | -3.6169 | |
30 | Q | A | -3.1646 | |
31 | R | A | -3.1175 | |
32 | F | A | -1.2412 | |
33 | H | A | -2.6164 | |
34 | N | A | -2.5480 | |
35 | I | A | -1.0122 | |
36 | R | A | -2.2296 | |
37 | G | A | -2.0009 | |
38 | R | A | -2.2102 | |
39 | W | A | -0.4393 | |
40 | T | A | -0.7440 | |
41 | G | A | -0.8900 | |
42 | P | A | -0.6301 | |
43 | G | A | -1.0456 | |
44 | P | A | -1.0789 | |
45 | G | A | -1.6954 | |
46 | N | A | -2.1188 | |
47 | P | A | -1.7021 | |
48 | A | A | -1.6425 | |
49 | E | A | -2.5458 | |
50 | K | A | -2.5130 | |
51 | L | A | -1.0197 | |
52 | R | A | -3.0699 | |
53 | H | A | -3.1715 | |
54 | L | A | -2.0312 | |
55 | N | A | -3.1332 | |
56 | E | A | -4.0579 | |
57 | K | A | -3.9281 | |
58 | R | A | -3.7942 | |
59 | R | A | -3.0865 | |
60 | F | A | -0.6962 | |
61 | G | A | -0.9502 | |
62 | P | A | -0.8053 | |
63 | G | A | -0.7589 | |
64 | P | A | -1.0311 | |
65 | G | A | -1.1614 | |
66 | S | A | -0.9159 | |
67 | K | A | -1.4657 | |
68 | I | A | 0.3952 | |
69 | S | A | -0.9130 | |
70 | E | A | -1.7598 | |
71 | Y | A | 0.2408 | |
72 | R | A | -0.8834 | |
73 | H | A | -0.5490 | |
74 | Y | A | 0.9335 | |
75 | C | A | 1.1252 | |
76 | Y | A | 1.7003 | |
77 | S | A | 1.0601 | |
78 | L | A | 2.0043 | |
79 | Y | A | 1.9965 | |
80 | G | A | 0.4378 | |
81 | G | A | -0.3371 | |
82 | P | A | -0.7587 | |
83 | G | A | -1.2248 | |
84 | P | A | -1.2584 | |
85 | G | A | -1.7412 | |
86 | R | A | -2.2587 | |
87 | A | A | -1.2503 | |
88 | H | A | -0.9566 | |
89 | Y | A | 1.0057 | |
90 | N | A | 0.9026 | |
91 | I | A | 2.8234 | |
92 | V | A | 3.0197 | |
93 | T | A | 2.2587 | |
94 | F | A | 2.6967 | |
95 | A | A | 1.8086 | |
96 | A | A | 1.4551 | |
97 | Y | A | 1.5893 | |
98 | T | A | 1.0777 | |
99 | L | A | 1.0602 | |
100 | Q | A | 0.2100 | |
101 | D | A | -0.4536 | |
102 | I | A | 1.1026 | |
103 | V | A | 2.1254 | |
104 | L | A | 1.6927 | |
105 | H | A | 0.7663 | |
106 | L | A | 1.9401 | |
107 | A | A | 1.8794 | |
108 | A | A | 1.9176 | |
109 | Y | A | 2.4510 | |
110 | L | A | 2.2694 | |
111 | L | A | 2.4079 | |
112 | M | A | 2.6807 | |
113 | G | A | 1.8343 | |
114 | T | A | 2.1144 | |
115 | L | A | 2.8230 | |
116 | G | A | 1.5793 | |
117 | I | A | 2.3382 | |
118 | V | A | 2.6497 | |
119 | A | A | 1.6062 | |
120 | A | A | 1.0711 | |
121 | Y | A | 0.8631 | |
122 | L | A | 0.5191 | |
123 | P | A | -0.7540 | |
124 | A | A | -1.2776 | |
125 | R | A | -2.7834 | |
126 | R | A | -2.9235 | |
127 | A | A | -2.1792 | |
128 | E | A | -2.7648 | |
129 | P | A | -1.9427 | |
130 | Q | A | -1.1687 | |
131 | A | A | -0.3443 | |
132 | A | A | 0.0000 | |
133 | Y | A | 1.8153 | |
134 | V | A | 3.0395 | |
135 | Y | A | 2.0242 | |
136 | D | A | 1.7418 | |
137 | F | A | 2.3383 | |
138 | A | A | 1.2517 | |
139 | F | A | 1.0875 | |
140 | R | A | -0.9957 | |
141 | D | A | -1.1012 | |
142 | L | A | -0.0463 | |
143 | A | A | -0.2005 | |
144 | A | A | -0.2351 | |
145 | Y | A | 0.2557 | |
146 | R | A | -0.7509 | |
147 | F | A | 0.6917 | |
148 | H | A | -0.4451 | |
149 | N | A | -0.7371 | |
150 | I | A | 0.1820 | |
151 | A | A | 0.1481 | |
152 | G | A | -0.6363 | |
153 | H | A | -0.3394 | |
154 | Y | A | 0.5288 | |
155 | A | A | 0.9291 | |
156 | A | A | 1.0168 | |
157 | Y | A | 1.9248 | |
158 | C | A | 1.8388 | |
159 | Y | A | 2.1890 | |
160 | S | A | 1.5618 | |
161 | L | A | 2.1419 | |
162 | Y | A | 2.0323 | |
163 | G | A | 0.8525 | |
164 | T | A | 0.9318 | |
165 | T | A | 0.9615 | |
166 | L | A | 1.3741 | |
167 | A | A | 0.4876 | |
168 | A | A | 0.6048 | |
169 | Y | A | 0.7260 | |
170 | K | A | -0.8960 | |
171 | T | A | -0.3329 | |
172 | V | A | 0.0369 | |
173 | L | A | -0.4037 | |
174 | E | A | -1.4341 | |
175 | L | A | 0.3773 | |
176 | T | A | -0.2546 | |
177 | E | A | -1.1165 | |
178 | V | A | 0.4428 | |
179 | A | A | 0.6679 | |
180 | A | A | 0.5713 | |
181 | Y | A | 0.8512 | |
182 | L | A | 0.7546 | |
183 | L | A | 1.2575 | |
184 | C | A | 0.8152 | |
185 | H | A | -0.5661 | |
186 | E | A | -1.7730 | |
187 | Q | A | -1.5640 | |
188 | L | A | -0.7162 | |
189 | S | A | -2.2677 | |
190 | D | A | -3.5342 | |
191 | S | A | -2.9991 | |
192 | E | A | -4.2087 | |
193 | E | A | -4.6453 | |
194 | E | A | -4.6032 | |
195 | N | A | -4.1251 | |
196 | D | A | -3.6848 | |
197 | G | A | -2.3369 | |
198 | P | A | -1.3646 | |
199 | G | A | -1.3507 | |
200 | P | A | -1.1678 | |
201 | G | A | -1.4236 | |
202 | Q | A | -1.8398 | |
203 | S | A | -1.3050 | |
204 | T | A | -1.0666 | |
205 | H | A | -0.9780 | |
206 | V | A | -0.0293 | |
207 | D | A | -0.6205 | |
208 | I | A | 0.2720 | |
209 | R | A | -1.7445 | |
210 | T | A | -1.0255 | |
211 | L | A | -0.1976 | |
212 | E | A | -1.4777 | |
213 | D | A | -1.7422 | |
214 | L | A | 0.0919 | |
215 | L | A | 0.9857 | |
216 | M | A | 0.7583 | |
217 | G | A | 0.0574 | |
218 | P | A | -0.4739 | |
219 | G | A | -0.7834 | |
220 | P | A | -0.7393 | |
221 | G | A | -0.7958 | |
222 | T | A | -0.9730 | |
223 | P | A | -1.0399 | |
224 | T | A | -0.6116 | |
225 | L | A | 0.0711 | |
226 | H | A | -1.2161 | |
227 | E | A | -1.5589 | |
228 | Y | A | -0.6648 | |
229 | M | A | -0.1182 | |
230 | L | A | -0.6051 | |
231 | D | A | -1.8775 | |
232 | L | A | -0.6804 | |
233 | Q | A | -1.7084 | |
234 | P | A | -1.9034 | |
235 | E | A | -2.5418 | |
236 | T | A | -1.5736 | |
237 | G | A | -1.4288 | |
238 | P | A | -1.2373 | |
239 | G | A | -1.2547 | |
240 | P | A | -0.6629 | |
241 | G | A | -0.1169 | |
242 | L | A | 1.3749 | |
243 | Q | A | 0.0944 | |
244 | D | A | 0.2208 | |
245 | I | A | 1.7002 | |
246 | V | A | 2.3834 | |
247 | L | A | 1.5867 | |
248 | H | A | 0.1938 | |
249 | L | A | 1.0966 | |
250 | E | A | -1.0980 | |
251 | P | A | -1.9678 | |
252 | Q | A | -2.5856 | |
253 | N | A | -2.5161 | |
254 | E | A | -2.0145 | |
255 | I | A | 0.2759 | |
256 | P | A | -0.3490 | |
257 | G | A | -0.5913 | |
258 | P | A | -0.6500 | |
259 | G | A | -1.0000 | |
260 | P | A | -0.8271 | |
261 | G | A | -0.7487 |