Chain sequence(s) |
A: ASNFTQFVLVDNGGTGDVTVAPSNFANGVAEWISSNSRSQAYKVTCSVRQSSAQNRKYTIKVEVPKVATQTVGGVELPVAARRSYLNMELTIPIFATNSDCELIVKAMQGLLKDGNPIPSAIAANSGIY
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | VY8A |
Energy difference between WT (input) and mutated protein (by FoldX) | 0.940378 kcal/mol |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] FoldX: Building mutant model (00:00:47) [INFO] FoldX: Starting FoldX energy minimalization (00:00:49) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:16) [INFO] Main: Simulation completed successfully. (00:01:17) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | A | A | -0.3097 | |
2 | S | A | -0.6618 | |
3 | N | A | -1.1694 | |
4 | F | A | -0.1428 | |
5 | T | A | -0.6570 | |
6 | Q | A | -0.5862 | |
7 | F | A | 0.6590 | |
8 | Y | A | 1.1507 | mutated: VY8A |
9 | L | A | 0.9025 | |
10 | V | A | -0.0528 | |
11 | D | A | -1.9921 | |
12 | N | A | -2.3385 | |
13 | G | A | -1.9111 | |
14 | G | A | -1.5260 | |
15 | T | A | -1.0903 | |
16 | G | A | -1.3955 | |
17 | D | A | -1.1771 | |
18 | V | A | 0.0639 | |
19 | T | A | 0.5343 | |
20 | V | A | 0.0000 | |
21 | A | A | -0.2170 | |
22 | P | A | -0.2982 | |
23 | S | A | -0.3869 | |
24 | N | A | -0.3638 | |
25 | F | A | 1.0488 | |
26 | A | A | 0.0067 | |
27 | N | A | -0.9367 | |
28 | G | A | -0.3052 | |
29 | V | A | 0.4761 | |
30 | A | A | 0.0000 | |
31 | E | A | -0.0657 | |
32 | W | A | 0.0000 | |
33 | I | A | -0.5190 | |
34 | S | A | 0.0000 | |
35 | S | A | -1.1595 | |
36 | N | A | -1.9391 | |
37 | S | A | -1.6591 | |
38 | R | A | -2.1791 | |
39 | S | A | -1.0976 | |
40 | Q | A | -1.5904 | |
41 | A | A | -1.4289 | |
42 | Y | A | -0.2770 | |
43 | K | A | -0.5143 | |
44 | V | A | 0.0000 | |
45 | T | A | -0.2575 | |
46 | C | A | 0.6493 | |
47 | S | A | 0.0000 | |
48 | V | A | 0.3242 | |
49 | R | A | -1.6558 | |
50 | Q | A | -2.2077 | |
51 | S | A | -1.4726 | |
52 | S | A | -1.1893 | |
53 | A | A | -1.5028 | |
54 | Q | A | -1.3571 | |
55 | N | A | -1.4012 | |
56 | R | A | -1.3491 | |
57 | K | A | -1.2281 | |
58 | Y | A | -0.2060 | |
59 | T | A | -0.5474 | |
60 | I | A | -0.1871 | |
61 | K | A | -0.8126 | |
62 | V | A | 0.3105 | |
63 | E | A | 0.0815 | |
64 | V | A | 0.4651 | |
65 | P | A | 0.0000 | |
66 | K | A | -0.3368 | |
67 | V | A | 1.3337 | |
68 | A | A | 0.1056 | |
69 | T | A | -0.0803 | |
70 | Q | A | -0.2084 | |
71 | T | A | 0.3618 | |
72 | V | A | 1.3003 | |
73 | G | A | 0.0408 | |
74 | G | A | -0.0396 | |
75 | V | A | 1.1504 | |
76 | E | A | -0.3319 | |
77 | L | A | 1.0190 | |
78 | P | A | 0.6174 | |
79 | V | A | 1.3240 | |
80 | A | A | 0.1695 | |
81 | A | A | -0.6321 | |
82 | R | A | -1.7606 | |
83 | R | A | -0.9225 | |
84 | S | A | -0.0424 | |
85 | Y | A | 0.8207 | |
86 | L | A | 0.6981 | |
87 | N | A | -0.8314 | |
88 | M | A | -0.6713 | |
89 | E | A | -1.5585 | |
90 | L | A | -0.4107 | |
91 | T | A | -0.9375 | |
92 | I | A | 0.0000 | |
93 | P | A | -0.3545 | |
94 | I | A | 0.2551 | |
95 | F | A | 1.4635 | |
96 | A | A | 0.0668 | |
97 | T | A | -0.7518 | |
98 | N | A | -1.6828 | |
99 | S | A | -1.4526 | |
100 | D | A | -1.0178 | |
101 | C | A | -0.8293 | |
102 | E | A | -1.3448 | |
103 | L | A | 0.2218 | |
104 | I | A | 0.4286 | |
105 | V | A | 0.8711 | |
106 | K | A | -0.5842 | |
107 | A | A | 0.3784 | |
108 | M | A | 0.5121 | |
109 | Q | A | -0.7381 | |
110 | G | A | -0.4439 | |
111 | L | A | 1.1796 | |
112 | L | A | 0.6394 | |
113 | K | A | -1.8439 | |
114 | D | A | -2.4547 | |
115 | G | A | -1.6640 | |
116 | N | A | -0.8642 | |
117 | P | A | 0.4943 | |
118 | I | A | 1.6185 | |
119 | P | A | 0.6017 | |
120 | S | A | 0.1114 | |
121 | A | A | 0.0000 | |
122 | I | A | 1.9952 | |
123 | A | A | 0.4724 | |
124 | A | A | -0.0843 | |
125 | N | A | -0.6973 | |
126 | S | A | 0.2202 | |
127 | G | A | 0.9567 | |
128 | I | A | 2.7428 | |
129 | Y | A | 2.1263 |