| Chain sequence(s) |
H: EVQLVESGGGVVQPGGSLKLSCVASGTDFSINFIRWYRQAPGKQREFVAGFTATGNTNYADSMKGRFTISRDNTKNAVYLQIDSLKPEDTAVYYCYMLDKWGQGTQVTVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:08:00)
[INFO] Main: Simulation completed successfully. (00:08:03)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.7625 | |
| 2 | V | H | -0.2987 | |
| 3 | Q | H | -1.1066 | |
| 4 | L | H | 0.2862 | |
| 5 | V | H | 1.7637 | |
| 6 | E | H | 0.0433 | |
| 7 | S | H | -0.3165 | |
| 9 | G | H | -0.4256 | |
| 10 | G | H | -0.3173 | |
| 11 | G | H | 0.1059 | |
| 12 | V | H | 1.7722 | |
| 13 | V | H | 0.2876 | |
| 14 | Q | H | -1.1949 | |
| 15 | P | H | -0.4671 | |
| 16 | G | H | -0.5330 | |
| 17 | G | H | -0.1837 | |
| 18 | S | H | -0.1994 | |
| 19 | L | H | -0.0521 | |
| 20 | K | H | -1.6820 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.0032 | |
| 23 | C | H | 0.0000 | |
| 24 | V | H | 0.9839 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.2719 | |
| 27 | G | H | -0.4744 | |
| 29 | T | H | -0.4710 | |
| 30 | D | H | -1.7992 | |
| 31 | F | H | 0.0000 | |
| 32 | S | H | -0.1006 | |
| 33 | I | H | 0.3379 | |
| 39 | N | H | -0.6522 | |
| 40 | F | H | 0.7248 | |
| 41 | I | H | 0.0000 | |
| 42 | R | H | -0.4734 | |
| 43 | W | H | 0.0000 | |
| 44 | Y | H | 0.2095 | |
| 45 | R | H | 0.0000 | |
| 46 | Q | H | -0.4511 | |
| 47 | A | H | -0.1021 | |
| 48 | P | H | -0.3372 | |
| 49 | G | H | -0.8117 | |
| 50 | K | H | -1.9991 | |
| 51 | Q | H | -1.6323 | |
| 52 | R | H | -1.1674 | |
| 53 | E | H | -1.1436 | |
| 54 | F | H | 0.3550 | |
| 55 | V | H | 0.0000 | |
| 56 | A | H | 0.0000 | |
| 57 | G | H | 0.0000 | |
| 58 | F | H | 0.2073 | |
| 59 | T | H | 0.1227 | |
| 60 | A | H | -0.1033 | |
| 65 | T | H | -0.1159 | |
| 66 | G | H | -0.5163 | |
| 67 | N | H | -1.3311 | |
| 68 | T | H | -0.4849 | |
| 69 | N | H | -1.2353 | |
| 70 | Y | H | 0.0349 | |
| 71 | A | H | -0.2650 | |
| 72 | D | H | -1.8259 | |
| 73 | S | H | -0.5350 | |
| 74 | M | H | 0.0000 | |
| 75 | K | H | -1.7840 | |
| 76 | G | H | -0.8287 | |
| 77 | R | H | -0.3992 | |
| 78 | F | H | 0.0000 | |
| 79 | T | H | -0.0702 | |
| 80 | I | H | 0.0000 | |
| 81 | S | H | -0.1675 | |
| 82 | R | H | -0.3201 | |
| 83 | D | H | -0.6168 | |
| 84 | N | H | -1.3478 | |
| 85 | T | H | -0.5986 | |
| 86 | K | H | -1.7879 | |
| 87 | N | H | -0.7256 | |
| 88 | A | H | 0.0000 | |
| 89 | V | H | 0.0000 | |
| 90 | Y | H | 0.4388 | |
| 91 | L | H | 0.0000 | |
| 92 | Q | H | -0.4552 | |
| 93 | I | H | 0.0000 | |
| 94 | D | H | -0.8381 | |
| 95 | S | H | -0.3759 | |
| 96 | L | H | 0.0000 | |
| 97 | K | H | -1.3623 | |
| 98 | P | H | -0.8106 | |
| 99 | E | H | -1.8649 | |
| 100 | D | H | 0.0000 | |
| 101 | T | H | -0.0182 | |
| 102 | A | H | 0.0000 | |
| 103 | V | H | 0.3713 | |
| 104 | Y | H | 0.0000 | |
| 105 | Y | H | 0.1488 | |
| 106 | C | H | 0.0000 | |
| 107 | Y | H | 0.2624 | |
| 108 | M | H | 0.0000 | |
| 109 | L | H | 0.2829 | |
| 137 | D | H | -1.8726 | |
| 138 | K | H | -1.3310 | |
| 139 | W | H | 0.3809 | |
| 140 | G | H | -0.1760 | |
| 141 | Q | H | -1.2291 | |
| 142 | G | H | -0.3021 | |
| 143 | T | H | -0.1976 | |
| 144 | Q | H | -0.8833 | |
| 145 | V | H | 0.0000 | |
| 146 | T | H | 0.1728 | |
| 147 | V | H | 0.0000 | |
| 148 | S | H | -0.1753 | |
| 149 | S | H | -0.2380 |