| Chain sequence(s) |
B: GDYSIAKKAEEKQKANVLQQALAEHYSAEQASALSKLSPEEQQKLGQEILAEKLAGSGC
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:01)
[INFO] Main: Simulation completed successfully. (00:03:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | B | -0.4369 | |
| 2 | D | B | -0.9644 | |
| 3 | Y | B | 0.4781 | |
| 4 | S | B | -0.0057 | |
| 5 | I | B | 0.5156 | |
| 6 | A | B | -0.8812 | |
| 7 | K | B | -2.3145 | |
| 8 | K | B | -2.9944 | |
| 9 | A | B | -2.7747 | |
| 10 | E | B | -4.5820 | |
| 11 | E | B | -4.9686 | |
| 12 | K | B | -4.8792 | |
| 13 | Q | B | -4.5598 | |
| 14 | K | B | -4.4018 | |
| 15 | A | B | -3.4076 | |
| 16 | N | B | -3.4660 | |
| 17 | V | B | -2.0914 | |
| 18 | L | B | 0.0000 | |
| 19 | Q | B | -2.9144 | |
| 20 | Q | B | -2.6306 | |
| 21 | A | B | 0.0000 | |
| 22 | L | B | 0.0000 | |
| 23 | A | B | -1.8766 | |
| 24 | E | B | -2.6993 | |
| 25 | H | B | -2.1790 | |
| 26 | Y | B | -1.4469 | |
| 27 | S | B | -1.4549 | |
| 28 | A | B | -1.4790 | |
| 29 | E | B | -2.3661 | |
| 30 | Q | B | -2.1075 | |
| 31 | A | B | -1.7005 | |
| 32 | S | B | -1.4702 | |
| 33 | A | B | -1.2899 | |
| 34 | L | B | 0.0000 | |
| 35 | S | B | -1.1243 | |
| 36 | K | B | -1.7113 | |
| 37 | L | B | -1.1206 | |
| 38 | S | B | -1.6417 | |
| 39 | P | B | -2.1238 | |
| 40 | E | B | -3.1467 | |
| 41 | E | B | -3.0343 | |
| 42 | Q | B | -2.8216 | |
| 43 | Q | B | -3.4938 | |
| 44 | K | B | -3.6518 | |
| 45 | L | B | -2.3417 | |
| 46 | G | B | 0.0000 | |
| 47 | Q | B | -3.1343 | |
| 48 | E | B | -3.1516 | |
| 49 | I | B | 0.0000 | |
| 50 | L | B | -1.5818 | |
| 51 | A | B | -1.5635 | |
| 52 | E | B | -2.6214 | |
| 53 | K | B | -1.9823 | |
| 54 | L | B | -0.1807 | |
| 55 | A | B | -0.5772 | |
| 56 | G | B | -1.0845 | |
| 57 | S | B | -0.6000 | |
| 58 | G | B | -0.2263 | |
| 59 | C | B | 0.4093 |