| Chain sequence(s) |
A: FSKGHGG
C: FSKGHGG B: FSKGHGG E: FSKGHGG D: FSKGHGG G: FSKGHGG F: FSKGHGG I: FSKGHGG H: FSKGHGG K: FSKGHGG J: FSKGHGG L: FSKGHGG input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:01)
[INFO] Main: Simulation completed successfully. (00:04:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 0.5077 | |
| 2 | S | A | 0.0000 | |
| 3 | K | A | -1.8991 | |
| 4 | G | A | 0.0000 | |
| 5 | H | A | -1.5126 | |
| 6 | G | A | 0.0000 | |
| 7 | G | A | -0.1766 | |
| 1 | F | B | 1.1651 | |
| 2 | S | B | -0.8470 | |
| 3 | K | B | -2.2198 | |
| 4 | G | B | -2.4865 | |
| 5 | H | B | -1.9101 | |
| 6 | G | B | -0.7226 | |
| 7 | G | B | -0.3981 | |
| 1 | F | C | 1.3570 | |
| 2 | S | C | -0.7015 | |
| 3 | K | C | -2.4282 | |
| 4 | G | C | -2.4942 | |
| 5 | H | C | -1.7012 | |
| 6 | G | C | -0.3726 | |
| 7 | G | C | 0.0240 | |
| 1 | F | D | 1.6878 | |
| 2 | S | D | 0.0000 | |
| 3 | K | D | -1.5006 | |
| 4 | G | D | 0.0000 | |
| 5 | H | D | -1.4891 | |
| 6 | G | D | 0.0000 | |
| 7 | G | D | -0.0281 | |
| 1 | F | E | 1.0753 | |
| 2 | S | E | 0.0000 | |
| 3 | K | E | -1.6105 | |
| 4 | G | E | 0.0000 | |
| 5 | H | E | -0.9885 | |
| 6 | G | E | -0.0060 | |
| 7 | G | E | 0.0165 | |
| 1 | F | F | 0.5078 | |
| 2 | S | F | 0.0000 | |
| 3 | K | F | -1.8749 | |
| 4 | G | F | 0.0000 | |
| 5 | H | F | -1.8214 | |
| 6 | G | F | 0.0000 | |
| 7 | G | F | -0.1806 | |
| 1 | F | G | 0.7243 | |
| 2 | S | G | 0.0000 | |
| 3 | K | G | -2.9105 | |
| 4 | G | G | 0.0000 | |
| 5 | H | G | -1.8761 | |
| 6 | G | G | -0.0954 | |
| 7 | G | G | 0.0159 | |
| 1 | F | H | 1.6112 | |
| 2 | S | H | -0.3821 | |
| 3 | K | H | -2.6194 | |
| 4 | G | H | -2.6956 | |
| 5 | H | H | -2.4585 | |
| 6 | G | H | -1.2256 | |
| 7 | G | H | -0.9143 | |
| 1 | F | I | 1.1563 | |
| 2 | S | I | 0.0000 | |
| 3 | K | I | -2.7495 | |
| 4 | G | I | -2.9895 | |
| 5 | H | I | -2.4040 | |
| 6 | G | I | -1.0675 | |
| 7 | G | I | -0.6782 | |
| 1 | F | J | 0.7610 | |
| 2 | S | J | 0.0000 | |
| 3 | K | J | -2.4505 | |
| 4 | G | J | 0.0000 | |
| 5 | H | J | -2.0762 | |
| 6 | G | J | 0.0000 | |
| 7 | G | J | -0.4283 | |
| 1 | F | K | 1.0123 | |
| 2 | S | K | 0.0000 | |
| 3 | K | K | -1.5850 | |
| 4 | G | K | 0.0000 | |
| 5 | H | K | -1.3439 | |
| 6 | G | K | -0.3145 | |
| 7 | G | K | -0.3454 | |
| 1 | F | L | 1.3424 | |
| 2 | S | L | 0.0000 | |
| 3 | K | L | -1.3013 | |
| 4 | G | L | 0.0000 | |
| 5 | H | L | -1.2340 | |
| 6 | G | L | 0.0000 | |
| 7 | G | L | -0.1171 |