| Chain sequence(s) |
A: MAVGFLSNTTSSGDTWIDGYRCMNATVTKAAKVENGFKFTGPGSRATWPVNSRWDIKQYGFVDYNFTIVAMATIHQVPSESTPLLGASLRGNKRTKLIGLSYGAGGKWETVYDGTKTVQGGTWEPGREYQVALMLQDGNKGFVYVDGVLVGNPAMLPTPEERWTEFSHFYFGGDEGDSGSDATLTDVFLYNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:19)
[INFO] Main: Simulation completed successfully. (00:02:20)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.7825 | |
| 2 | A | A | 0.6005 | |
| 3 | V | A | 0.5042 | |
| 4 | G | A | 0.0000 | |
| 5 | F | A | 0.2026 | |
| 6 | L | A | 0.0000 | |
| 7 | S | A | -1.2128 | |
| 8 | N | A | -1.9705 | |
| 9 | T | A | -1.7088 | |
| 10 | T | A | -1.0343 | |
| 11 | S | A | -1.0063 | |
| 12 | S | A | -1.1323 | |
| 13 | G | A | -1.7759 | |
| 14 | D | A | -2.5249 | |
| 15 | T | A | -1.5352 | |
| 16 | W | A | 0.0000 | |
| 17 | I | A | -0.8499 | |
| 18 | D | A | 0.0000 | |
| 19 | G | A | -0.3057 | |
| 20 | Y | A | 0.3215 | |
| 21 | R | A | -1.2367 | |
| 22 | C | A | -0.3802 | |
| 23 | M | A | -0.4773 | |
| 24 | N | A | -1.1864 | |
| 25 | A | A | 0.0000 | |
| 26 | T | A | -0.8004 | |
| 27 | V | A | 0.0000 | |
| 28 | T | A | -1.4740 | |
| 29 | K | A | -2.3791 | |
| 30 | A | A | -1.7595 | |
| 31 | A | A | -1.4581 | |
| 32 | K | A | -2.6685 | |
| 33 | V | A | -1.6151 | |
| 34 | E | A | -2.5574 | |
| 35 | N | A | -2.1077 | |
| 36 | G | A | 0.0000 | |
| 37 | F | A | 0.0000 | |
| 38 | K | A | -1.2967 | |
| 39 | F | A | 0.0000 | |
| 40 | T | A | -0.9476 | |
| 41 | G | A | -1.2597 | |
| 42 | P | A | -2.0488 | |
| 43 | G | A | -1.8093 | |
| 44 | S | A | 0.0000 | |
| 45 | R | A | -1.2384 | |
| 46 | A | A | 0.0000 | |
| 47 | T | A | -0.3806 | |
| 48 | W | A | 0.0000 | |
| 49 | P | A | -0.3609 | |
| 50 | V | A | 0.0000 | |
| 51 | N | A | 0.0000 | |
| 52 | S | A | -1.4125 | |
| 53 | R | A | -1.7863 | |
| 54 | W | A | -0.3982 | |
| 55 | D | A | -1.1810 | |
| 56 | I | A | 0.0482 | |
| 57 | K | A | -1.5739 | |
| 58 | Q | A | -0.9774 | |
| 59 | Y | A | 0.0000 | |
| 60 | G | A | -0.3925 | |
| 61 | F | A | -0.1583 | |
| 62 | V | A | 0.0000 | |
| 63 | D | A | 0.0000 | |
| 64 | Y | A | -0.1468 | |
| 65 | N | A | -1.1400 | |
| 66 | F | A | 0.0000 | |
| 67 | T | A | 0.0000 | |
| 68 | I | A | 0.0000 | |
| 69 | V | A | 0.2319 | |
| 70 | A | A | 0.0000 | |
| 71 | M | A | -0.8575 | |
| 72 | A | A | 0.0000 | |
| 73 | T | A | -1.7085 | |
| 74 | I | A | 0.0000 | |
| 75 | H | A | -1.4418 | |
| 76 | Q | A | -1.0000 | |
| 77 | V | A | 0.3352 | |
| 78 | P | A | 0.0000 | |
| 79 | S | A | -1.2224 | |
| 80 | E | A | -2.2814 | |
| 81 | S | A | -1.1433 | |
| 82 | T | A | 0.0000 | |
| 83 | P | A | 0.0000 | |
| 84 | L | A | 0.0000 | |
| 85 | L | A | 0.0000 | |
| 86 | G | A | 0.0000 | |
| 87 | A | A | 0.0000 | |
| 88 | S | A | 0.0000 | |
| 89 | L | A | 0.0000 | |
| 90 | R | A | -2.1897 | |
| 91 | G | A | -2.3935 | |
| 92 | N | A | -2.8303 | |
| 93 | K | A | -3.4886 | |
| 94 | R | A | -3.5017 | |
| 95 | T | A | -2.5059 | |
| 96 | K | A | -1.8073 | |
| 97 | L | A | 0.0000 | |
| 98 | I | A | 0.0000 | |
| 99 | G | A | 0.0000 | |
| 100 | L | A | 0.0000 | |
| 101 | S | A | 0.0000 | |
| 102 | Y | A | 0.0000 | |
| 103 | G | A | 0.0000 | |
| 104 | A | A | -0.5356 | |
| 105 | G | A | -0.5914 | |
| 106 | G | A | -0.7672 | |
| 107 | K | A | -1.2554 | |
| 108 | W | A | 0.0000 | |
| 109 | E | A | 0.0000 | |
| 110 | T | A | 0.0000 | |
| 111 | V | A | 0.0000 | |
| 112 | Y | A | -0.8920 | |
| 113 | D | A | -1.7893 | |
| 114 | G | A | -2.0009 | |
| 115 | T | A | -1.3928 | |
| 116 | K | A | -1.1113 | |
| 117 | T | A | 0.1154 | |
| 118 | V | A | 0.9250 | |
| 119 | Q | A | -0.2720 | |
| 120 | G | A | -0.7567 | |
| 121 | G | A | -0.5295 | |
| 122 | T | A | -1.2215 | |
| 123 | W | A | 0.0000 | |
| 124 | E | A | -2.3132 | |
| 125 | P | A | -1.7851 | |
| 126 | G | A | -2.0795 | |
| 127 | R | A | -2.4540 | |
| 128 | E | A | -2.8898 | |
| 129 | Y | A | 0.0000 | |
| 130 | Q | A | -1.6591 | |
| 131 | V | A | 0.0000 | |
| 132 | A | A | 0.0000 | |
| 133 | L | A | 0.0000 | |
| 134 | M | A | -0.2658 | |
| 135 | L | A | 0.0000 | |
| 136 | Q | A | -1.5882 | |
| 137 | D | A | -2.1606 | |
| 138 | G | A | 0.0000 | |
| 139 | N | A | -0.8914 | |
| 140 | K | A | -0.8155 | |
| 141 | G | A | 0.0000 | |
| 142 | F | A | 0.1210 | |
| 143 | V | A | 0.0000 | |
| 144 | Y | A | 0.4967 | |
| 145 | V | A | 0.0000 | |
| 146 | D | A | -1.4489 | |
| 147 | G | A | -0.2689 | |
| 148 | V | A | 1.2441 | |
| 149 | L | A | 0.7395 | |
| 150 | V | A | 0.0000 | |
| 151 | G | A | -0.4297 | |
| 152 | N | A | -1.2349 | |
| 153 | P | A | -0.4297 | |
| 154 | A | A | -0.1569 | |
| 155 | M | A | 0.4434 | |
| 156 | L | A | 0.0000 | |
| 157 | P | A | -1.0215 | |
| 158 | T | A | -1.3283 | |
| 159 | P | A | -1.3115 | |
| 160 | E | A | -2.5228 | |
| 161 | E | A | -2.4985 | |
| 162 | R | A | -1.4784 | |
| 163 | W | A | -0.3911 | |
| 164 | T | A | -0.8828 | |
| 165 | E | A | -1.2130 | |
| 166 | F | A | 0.0000 | |
| 167 | S | A | -1.0307 | |
| 168 | H | A | -0.5164 | |
| 169 | F | A | 0.0000 | |
| 170 | Y | A | 0.0000 | |
| 171 | F | A | 0.0000 | |
| 172 | G | A | 0.0000 | |
| 173 | G | A | 0.0000 | |
| 174 | D | A | -1.8355 | |
| 175 | E | A | -2.9148 | |
| 176 | G | A | -2.6488 | |
| 177 | D | A | -2.9446 | |
| 178 | S | A | 0.0000 | |
| 179 | G | A | -1.4647 | |
| 180 | S | A | 0.0000 | |
| 181 | D | A | -0.6849 | |
| 182 | A | A | 0.0000 | |
| 183 | T | A | -0.6526 | |
| 184 | L | A | 0.0000 | |
| 185 | T | A | -0.9996 | |
| 186 | D | A | -1.2774 | |
| 187 | V | A | 0.0000 | |
| 188 | F | A | 0.6143 | |
| 189 | L | A | 0.0000 | |
| 190 | Y | A | -0.2744 | |
| 191 | N | A | -1.3870 | |
| 192 | R | A | -2.2403 |