| Chain sequence(s) |
A: SDYVNYDIIVRHYNYTGKLNIKLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLSGATTYKLTPAQWFLREGSMFVALSASVWSLLAIAIERYITMLKMKNFRLFLLISACWVISLILGGLPIMGWNCISALSSCSTVLPLYHKHYILFCTTVFTLLLLSIVILYCRIYSLVRTRSRRLTFRSLALLKTVIIVLSVFIACWAPLFILLLLDVGCKVKTCDILFRAEYFLVLAVLNSGTNPIIYTLTNKEMRRAFIR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:19)
[INFO] Main: Simulation completed successfully. (00:04:21)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 17 | S | A | -0.6694 | |
| 18 | D | A | -1.2346 | |
| 19 | Y | A | 0.4853 | |
| 20 | V | A | 0.8939 | |
| 21 | N | A | -0.5646 | |
| 22 | Y | A | 0.0239 | |
| 23 | D | A | -1.3266 | |
| 24 | I | A | -0.3901 | |
| 25 | I | A | 0.0000 | |
| 26 | V | A | -0.5352 | |
| 27 | R | A | -1.7022 | |
| 28 | H | A | 0.0000 | |
| 29 | Y | A | -0.4397 | |
| 30 | N | A | -1.5697 | |
| 31 | Y | A | -0.6625 | |
| 32 | T | A | 0.0000 | |
| 33 | G | A | -0.5829 | |
| 34 | K | A | -0.1160 | |
| 35 | L | A | -0.1335 | |
| 36 | N | A | -0.4519 | |
| 37 | I | A | 1.3524 | |
| 46 | K | A | -0.6416 | |
| 47 | L | A | 1.3098 | |
| 48 | T | A | 0.8449 | |
| 49 | S | A | 1.2803 | |
| 50 | V | A | 2.0700 | |
| 51 | V | A | 2.2322 | |
| 52 | F | A | 2.1366 | |
| 53 | I | A | 2.6839 | |
| 54 | L | A | 2.8890 | |
| 55 | I | A | 2.4803 | |
| 56 | C | A | 0.0000 | |
| 57 | C | A | 2.7200 | |
| 58 | F | A | 3.2143 | |
| 59 | I | A | 0.0000 | |
| 60 | I | A | 2.8387 | |
| 61 | L | A | 2.7928 | |
| 62 | E | A | 1.6059 | |
| 63 | N | A | 0.0000 | |
| 64 | I | A | 2.0310 | |
| 65 | F | A | 1.9275 | |
| 66 | V | A | 0.0000 | |
| 67 | L | A | 0.0000 | |
| 68 | L | A | 1.1024 | |
| 69 | T | A | 0.3716 | |
| 70 | I | A | 0.0000 | |
| 71 | W | A | 0.0086 | |
| 72 | K | A | -1.7669 | |
| 73 | T | A | -1.9808 | |
| 74 | K | A | -3.2858 | |
| 75 | K | A | -3.2243 | |
| 76 | F | A | 0.0000 | |
| 77 | H | A | -2.6660 | |
| 78 | R | A | -2.5865 | |
| 79 | P | A | -0.9876 | |
| 80 | M | A | -0.3070 | |
| 81 | Y | A | -0.1370 | |
| 82 | Y | A | 0.5863 | |
| 83 | F | A | 0.0000 | |
| 84 | I | A | 0.0000 | |
| 85 | G | A | 0.8460 | |
| 86 | N | A | 0.5174 | |
| 87 | L | A | 0.0000 | |
| 88 | A | A | 0.0000 | |
| 89 | L | A | 1.6129 | |
| 90 | S | A | 0.0000 | |
| 91 | D | A | 0.0000 | |
| 92 | L | A | 1.7952 | |
| 93 | L | A | 1.7846 | |
| 94 | A | A | 0.0000 | |
| 95 | G | A | 0.0000 | |
| 96 | V | A | 1.8885 | |
| 97 | A | A | 0.0000 | |
| 98 | Y | A | 0.0000 | |
| 99 | T | A | 1.2801 | |
| 100 | A | A | 1.0906 | |
| 101 | N | A | 0.9038 | |
| 102 | L | A | 1.3677 | |
| 103 | L | A | 1.8474 | |
| 104 | L | A | 1.1830 | |
| 105 | S | A | 0.5579 | |
| 106 | G | A | 0.0594 | |
| 107 | A | A | -0.0597 | |
| 108 | T | A | -0.1437 | |
| 109 | T | A | 0.0000 | |
| 110 | Y | A | -0.0813 | |
| 111 | K | A | -1.0876 | |
| 112 | L | A | -0.2581 | |
| 113 | T | A | 0.1746 | |
| 114 | P | A | 0.0000 | |
| 115 | A | A | 0.8598 | |
| 116 | Q | A | 0.3828 | |
| 117 | W | A | 0.0000 | |
| 118 | F | A | 0.0000 | |
| 119 | L | A | 1.4487 | |
| 120 | R | A | 0.0000 | |
| 121 | E | A | 0.2676 | |
| 122 | G | A | 0.8770 | |
| 123 | S | A | 0.7689 | |
| 124 | M | A | 0.0000 | |
| 125 | F | A | 0.6187 | |
| 126 | V | A | 1.2398 | |
| 127 | A | A | 0.0000 | |
| 128 | L | A | 0.4911 | |
| 129 | S | A | 0.0000 | |
| 130 | A | A | 1.1247 | |
| 131 | S | A | 0.0000 | |
| 132 | V | A | 0.0000 | |
| 133 | W | A | 0.6409 | |
| 134 | S | A | 0.0000 | |
| 135 | L | A | 0.3553 | |
| 136 | L | A | 0.5139 | |
| 137 | A | A | 0.0000 | |
| 138 | I | A | 0.0000 | |
| 139 | A | A | 0.0000 | |
| 140 | I | A | 0.3749 | |
| 141 | E | A | -0.1133 | |
| 142 | R | A | 0.0824 | |
| 143 | Y | A | 0.7084 | |
| 144 | I | A | 0.9422 | |
| 145 | T | A | 0.6519 | |
| 146 | M | A | 1.0075 | |
| 147 | L | A | 1.3655 | |
| 148 | K | A | -0.6823 | |
| 149 | M | A | -0.4076 | |
| 150 | K | A | -1.6589 | |
| 157 | N | A | -0.1894 | |
| 158 | F | A | 1.4956 | |
| 159 | R | A | 0.2799 | |
| 160 | L | A | 1.0536 | |
| 161 | F | A | 2.0736 | |
| 162 | L | A | 1.7586 | |
| 163 | L | A | 1.4738 | |
| 164 | I | A | 1.4292 | |
| 165 | S | A | 1.4394 | |
| 166 | A | A | 1.4977 | |
| 167 | C | A | 0.0000 | |
| 168 | W | A | 2.3407 | |
| 169 | V | A | 2.9900 | |
| 170 | I | A | 2.6837 | |
| 171 | S | A | 0.0000 | |
| 172 | L | A | 3.2021 | |
| 173 | I | A | 3.2642 | |
| 174 | L | A | 1.9997 | |
| 175 | G | A | 0.0000 | |
| 176 | G | A | 1.8582 | |
| 177 | L | A | 1.7603 | |
| 178 | P | A | 0.0000 | |
| 179 | I | A | 2.7199 | |
| 180 | M | A | 1.8640 | |
| 181 | G | A | 1.0179 | |
| 182 | W | A | 0.9841 | |
| 183 | N | A | 0.7101 | |
| 184 | C | A | 0.0000 | |
| 185 | I | A | 0.9488 | |
| 186 | S | A | 0.4942 | |
| 187 | A | A | 0.3267 | |
| 188 | L | A | 0.3757 | |
| 189 | S | A | -0.0434 | |
| 190 | S | A | -0.3938 | |
| 191 | C | A | 0.0000 | |
| 192 | S | A | 0.0000 | |
| 193 | T | A | 0.0407 | |
| 194 | V | A | 0.2408 | |
| 195 | L | A | 0.4984 | |
| 196 | P | A | 0.0000 | |
| 197 | L | A | 0.0000 | |
| 198 | Y | A | 0.0000 | |
| 199 | H | A | -0.6130 | |
| 200 | K | A | -0.6895 | |
| 201 | H | A | -0.7226 | |
| 202 | Y | A | 0.0000 | |
| 203 | I | A | 0.0000 | |
| 204 | L | A | 0.7699 | |
| 205 | F | A | 0.6161 | |
| 206 | C | A | 0.8432 | |
| 207 | T | A | 1.1669 | |
| 208 | T | A | 0.8905 | |
| 209 | V | A | 1.1594 | |
| 210 | F | A | 1.3752 | |
| 211 | T | A | 1.4749 | |
| 212 | L | A | 2.2744 | |
| 213 | L | A | 0.0000 | |
| 214 | L | A | 2.1384 | |
| 215 | L | A | 2.7831 | |
| 216 | S | A | 1.9966 | |
| 217 | I | A | 0.0000 | |
| 218 | V | A | 2.1366 | |
| 219 | I | A | 2.2094 | |
| 220 | L | A | 0.0000 | |
| 221 | Y | A | 0.0000 | |
| 222 | C | A | 1.1497 | |
| 223 | R | A | -0.1100 | |
| 224 | I | A | 0.0000 | |
| 225 | Y | A | 0.1705 | |
| 226 | S | A | -0.6531 | |
| 227 | L | A | -0.1569 | |
| 228 | V | A | 0.0000 | |
| 229 | R | A | -2.5486 | |
| 230 | T | A | -2.1100 | |
| 231 | R | A | -2.3835 | |
| 232 | S | A | -1.8445 | |
| 233 | R | A | -2.8373 | |
| 234 | R | A | -2.3893 | |
| 235 | L | A | 0.1742 | |
| 236 | T | A | 0.3587 | |
| 237 | F | A | 0.9254 | |
| 238 | R | A | -0.7493 | |
| 251 | S | A | 0.1184 | |
| 252 | L | A | 0.1339 | |
| 253 | A | A | 0.2642 | |
| 254 | L | A | 0.6357 | |
| 255 | L | A | 1.3127 | |
| 256 | K | A | -0.1520 | |
| 257 | T | A | 0.6797 | |
| 258 | V | A | 1.6873 | |
| 259 | I | A | 2.4114 | |
| 260 | I | A | 1.7406 | |
| 261 | V | A | 1.4438 | |
| 262 | L | A | 1.7036 | |
| 263 | S | A | 1.2977 | |
| 264 | V | A | 1.2001 | |
| 265 | F | A | 0.0000 | |
| 266 | I | A | 1.0883 | |
| 267 | A | A | 0.6427 | |
| 268 | C | A | 0.0000 | |
| 269 | W | A | 0.0000 | |
| 270 | A | A | 1.1207 | |
| 271 | P | A | 1.3668 | |
| 272 | L | A | 1.8925 | |
| 273 | F | A | 2.0065 | |
| 274 | I | A | 2.7657 | |
| 275 | L | A | 0.0000 | |
| 276 | L | A | 1.9012 | |
| 277 | L | A | 2.2870 | |
| 278 | L | A | 2.3239 | |
| 279 | D | A | 0.0000 | |
| 280 | V | A | 0.4199 | |
| 281 | G | A | -0.1168 | |
| 282 | C | A | -0.6230 | |
| 283 | K | A | -1.8814 | |
| 284 | V | A | -1.3326 | |
| 285 | K | A | -2.1448 | |
| 286 | T | A | -1.4105 | |
| 287 | C | A | -0.8625 | |
| 288 | D | A | -1.4484 | |
| 289 | I | A | 0.3039 | |
| 290 | L | A | 0.0000 | |
| 291 | F | A | -0.6244 | |
| 292 | R | A | -1.4342 | |
| 293 | A | A | -0.2926 | |
| 294 | E | A | -0.8739 | |
| 295 | Y | A | 0.8221 | |
| 296 | F | A | 1.1172 | |
| 297 | L | A | 1.1568 | |
| 298 | V | A | 1.2475 | |
| 299 | L | A | 1.4022 | |
| 300 | A | A | 0.0000 | |
| 301 | V | A | 0.0000 | |
| 302 | L | A | 1.0532 | |
| 303 | N | A | 0.0000 | |
| 304 | S | A | 0.0000 | |
| 305 | G | A | 0.9693 | |
| 306 | T | A | 0.5262 | |
| 307 | N | A | 0.0000 | |
| 308 | P | A | 0.0000 | |
| 309 | I | A | 1.4852 | |
| 310 | I | A | 1.3105 | |
| 311 | Y | A | 0.7905 | |
| 312 | T | A | 0.0000 | |
| 313 | L | A | 0.1315 | |
| 314 | T | A | -0.4178 | |
| 315 | N | A | -1.5675 | |
| 316 | K | A | -2.9855 | |
| 317 | E | A | -2.2958 | |
| 318 | M | A | 0.0000 | |
| 319 | R | A | -2.8567 | |
| 320 | R | A | -2.7694 | |
| 321 | A | A | -1.7964 | |
| 322 | F | A | -0.5017 | |
| 323 | I | A | 0.1152 | |
| 324 | R | A | -1.3169 |