Project name: f405cd41a2e116c

Status: done

Started: 2024-12-30 06:56:43
Settings
Chain sequence(s) I: MDVTIQHPWFKRTLGPFYPSRLFDQFFGEGLFEYDLLPFLSSTISPYYRQSLFRTVLDSGISEVRSDRDKFVIFLDVKHFSPEDLTVKVQDDFVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLSADGMLTFCGPKIQTGLDATHAERAIPVSREEKPTSAPSS
input PDB
Selected Chain(s) I
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with I chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:29)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:30)
Show buried residues

Minimal score value
-4.0187
Maximal score value
1.9037
Average score
-0.6832
Total score value
-118.191

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M I 1.0353
2 D I 0.5608
3 V I 1.3435
4 T I 1.2491
5 I I 1.5562
6 Q I 0.0000
7 H I -0.3355
8 P I -0.4887
9 W I -0.0704
10 F I 0.0000
11 K I -2.3672
12 R I -2.5311
13 T I 0.0000
14 L I -0.5086
15 G I -0.8999
16 P I -0.1919
17 F I 0.0000
18 Y I 1.1979
19 P I 0.1711
20 S I -0.1005
21 R I -1.7747
22 L I -0.3689
23 F I 0.0000
24 D I -1.2484
25 Q I -1.2997
26 F I 0.2926
27 F I 0.3761
28 G I -0.5072
29 E I -0.8897
30 G I -0.4515
31 L I 0.5555
32 F I 1.3306
33 E I -0.4332
34 Y I 0.7013
35 D I -0.4415
36 L I 1.3155
37 L I 1.1197
38 P I 0.7299
39 F I 0.8568
40 L I 1.0204
41 S I 0.7887
42 S I 0.7456
43 T I 1.0578
44 I I 1.9037
45 S I 0.9135
46 P I 0.0000
47 Y I 0.4824
48 Y I 0.0000
49 R I -1.8927
50 Q I 0.0000
51 S I -0.4722
52 L I 1.3560
53 F I 0.0000
54 R I 0.0000
55 T I 0.0652
56 V I 1.2438
57 L I 0.0000
58 D I -0.9242
59 S I -0.3023
60 G I 0.0139
61 I I 1.1158
62 S I 0.0000
63 E I -1.2575
64 V I 0.0000
65 R I -1.9052
66 S I 0.0000
67 D I -2.5101
68 R I -3.1882
69 D I -2.8438
70 K I -2.1584
71 F I 0.0000
72 V I 0.0000
73 I I 0.0000
74 F I -0.8939
75 L I 0.0000
76 D I -1.6418
77 V I 0.0000
78 K I -2.3214
79 H I 0.0000
80 F I 0.0000
81 S I -1.1566
82 P I 0.0000
83 E I -2.3446
84 D I -2.1798
85 L I 0.0000
86 T I -0.8592
87 V I 0.0000
88 K I -1.8337
89 V I 0.0000
90 Q I -2.7867
91 D I -2.6986
92 D I -1.5003
93 F I -1.5811
94 V I 0.0000
95 E I 0.0000
96 I I 0.0000
97 H I -1.7681
98 G I 0.0000
99 K I -4.0187
100 H I -3.2686
101 N I -3.0080
102 E I -2.5798
103 R I -2.5769
104 Q I -2.9400
105 D I -3.5098
106 D I -3.3904
107 H I -2.4285
108 G I -1.6889
109 Y I -0.5597
110 I I -0.7923
111 S I -2.3969
112 R I -3.6635
113 E I -3.9107
114 F I -2.0720
115 H I -2.0105
116 R I 0.0000
117 R I -2.2425
118 Y I -0.8682
119 R I -0.9913
120 L I 0.0000
121 P I 0.0000
122 S I 0.0000
123 N I 0.0000
124 V I 0.0000
125 D I -0.7469
126 Q I 0.0000
127 S I -0.9775
128 A I 0.0000
129 L I 0.0000
130 S I -0.6132
131 C I 0.0000
132 S I 0.0000
133 L I -1.2810
134 S I -0.9391
135 A I -1.0715
136 D I -2.1535
137 G I -1.6843
138 M I 0.0000
139 L I 0.0000
140 T I 0.0000
141 F I 0.0000
142 C I 0.0000
143 G I 0.0000
144 P I -0.6961
145 K I -0.8560
146 I I 0.4162
147 Q I -0.8645
148 T I -0.8421
149 G I -0.2773
150 L I -0.0813
151 D I -0.4090
152 A I -0.3861
153 T I -0.4875
154 H I 0.0000
155 A I -1.6591
156 E I -3.1619
157 R I -3.0285
158 A I -1.4919
159 I I -0.6735
160 P I -0.6878
161 V I -0.6753
162 S I -1.3834
163 R I -2.6861
164 E I 0.0000
165 E I -2.8209
166 K I -2.0976
167 P I -1.2600
168 T I -1.3497
169 S I -0.6493
170 A I 0.0718
171 P I -0.0982
172 S I -0.4327
173 S I -0.4087
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Laboratory of Theory of Biopolymers 2018