Project name: 1-19-test2

Status: done

Started: 2025-10-09 07:21:36
Settings
Chain sequence(s) A: MVPILVTLDATVNGHTFTVSGEGEGSAKAGTLTLQFKCTTEELPVPWPTLVTTLTYGVQCFSRYPEEDKAKDFFKKWMPTGYEQTRTIKFDNDGSYKTRATVKFVGDVLKNRILLLGSNFKEDSVIASHALEYSFNSHTVTIYSSEKEDGIKASFTIEHLCKDGKVLTAKHYQQNKPRGDGELNLPEEGTLTTTSTLSKDPRSSEDSMKLTEHVEAS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:22)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:23)
Show buried residues

Minimal score value
-4.3863
Maximal score value
0.6755
Average score
-1.0606
Total score value
-230.1486

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.6755
2 V A 0.2550
3 P A -0.6257
4 I A 0.0000
5 L A -0.9748
6 V A 0.0000
7 T A -1.1892
8 L A 0.0000
9 D A -1.0529
10 A A 0.0000
11 T A -0.3656
12 V A 0.0000
13 N A -2.2908
14 G A -1.2849
15 H A -1.2324
16 T A -0.9849
17 F A 0.0000
18 T A -1.0158
19 V A 0.0000
20 S A -1.2262
21 G A 0.0000
22 E A -2.6508
23 G A -1.8042
24 E A -1.3398
25 G A 0.0000
26 S A -0.5263
27 A A -1.0398
28 K A -1.7585
29 A A -1.0767
30 G A 0.0000
31 T A -0.8071
32 L A 0.0000
33 T A -1.1540
34 L A 0.0000
35 Q A -2.6486
36 F A 0.0000
37 K A -2.2635
38 C A 0.0000
39 T A -1.3754
40 T A -1.6008
41 E A -3.0805
42 E A -3.2738
43 L A 0.0000
44 P A -1.2322
45 V A 0.0000
46 P A 0.0000
47 W A 0.0000
48 P A 0.0000
49 T A 0.0000
50 L A 0.0000
51 V A 0.0000
52 T A 0.0000
53 T A 0.0000
54 L A 0.0000
55 T A 0.0000
56 Y A 0.0000
57 G A 0.0000
58 V A 0.0000
59 Q A 0.0000
60 C A 0.0000
61 F A 0.0000
62 S A 0.0000
63 R A -2.1287
64 Y A -2.2890
65 P A -2.6322
66 E A -3.4416
67 E A -3.4519
68 D A -3.0958
69 K A -3.4769
70 A A -2.3980
71 K A -2.5517
72 D A 0.0000
73 F A 0.0000
74 F A 0.0000
75 K A -1.7184
76 K A -2.3571
77 W A 0.0000
78 M A -0.8985
79 P A -0.6696
80 T A -0.8025
81 G A 0.0000
82 Y A 0.0000
83 E A -1.4967
84 Q A 0.0000
85 T A -1.2160
86 R A 0.0000
87 T A -0.8743
88 I A 0.0000
89 K A -2.2556
90 F A 0.0000
91 D A -2.8673
92 N A -2.6693
93 D A -2.7763
94 G A 0.0000
95 S A -1.5411
96 Y A 0.0000
97 K A -1.5145
98 T A 0.0000
99 R A -2.1133
100 A A 0.0000
101 T A -1.4032
102 V A 0.0000
103 K A -0.5947
104 F A 0.2240
105 V A 0.5866
106 G A -0.6156
107 D A -1.3408
108 V A -0.1907
109 L A 0.0000
110 K A -0.8429
111 N A 0.0000
112 R A -2.2755
113 I A 0.0000
114 L A -0.5622
115 L A 0.0000
116 L A 0.3569
117 G A 0.0000
118 S A -1.4739
119 N A -2.3864
120 F A 0.0000
121 K A -3.8557
122 E A -3.8043
123 D A -3.2604
124 S A 0.0000
125 V A -0.7947
126 I A 0.0000
127 A A -1.6803
128 S A -1.4099
129 H A -1.3366
130 A A -1.4951
131 L A 0.0000
132 E A -2.1417
133 Y A -0.8372
134 S A -0.3416
135 F A -0.4819
136 N A -0.8570
137 S A -0.7706
138 H A -0.5844
139 T A -0.3244
140 V A 0.0000
141 T A -0.5326
142 I A 0.0000
143 Y A -1.1924
144 S A -2.2508
145 S A 0.0000
146 E A -3.9343
147 K A -3.9743
148 E A -4.3863
149 D A -4.1534
150 G A 0.0000
151 I A 0.0000
152 K A -1.4948
153 A A 0.0000
154 S A -0.1220
155 F A 0.0000
156 T A -0.8438
157 I A 0.0000
158 E A -1.4351
159 H A 0.0000
160 L A -1.1919
161 C A 0.0000
162 K A -3.2662
163 D A -3.2171
164 G A -2.4867
165 K A -2.2831
166 V A -0.8323
167 L A 0.0000
168 T A -1.5721
169 A A 0.0000
170 K A -1.7361
171 H A 0.0000
172 Y A 0.2186
173 Q A 0.0000
174 Q A -1.2544
175 N A 0.0000
176 K A -2.1795
177 P A -1.9502
178 R A -2.0247
179 G A -2.0105
180 D A -2.6404
181 G A -2.4481
182 E A -2.5595
183 L A -2.3282
184 N A -2.4613
185 L A -1.8605
186 P A 0.0000
187 E A -2.8914
188 E A -2.7608
189 G A -1.5698
190 T A -0.6482
191 L A 0.0000
192 T A -0.6647
193 T A 0.0000
194 T A -0.5769
195 S A 0.0000
196 T A -0.2295
197 L A -0.5205
198 S A -1.3595
199 K A -2.9766
200 D A -2.8432
201 P A -2.1698
202 R A -2.7019
203 S A -2.3196
204 S A -1.9987
205 E A -3.4196
206 D A -2.9945
207 S A -2.4594
208 M A 0.0000
209 K A -2.0358
210 L A 0.0000
211 T A -0.5589
212 E A 0.0000
213 H A -0.8387
214 V A 0.0000
215 E A -1.4351
216 A A 0.0000
217 S A -1.0963
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Laboratory of Theory of Biopolymers 2018