| Chain sequence(s) |
C: EVQLVESGGGLVQPGGSLRLSCAASGFTLSDYYMSWVRQAPGKGLEWMGIIYPGDSDTRYSPSFQGHVTISRDDSKNTLYLQMNSLRAEDTAVYYCTRWGAGKDVWGQGTTVTVSS
input PDB |
| Selected Chain(s) | C |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with C chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:52)
[INFO] Main: Simulation completed successfully. (00:00:53)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | C | -2.1200 | |
| 2 | V | C | -1.2529 | |
| 3 | Q | C | -1.2534 | |
| 4 | L | C | 0.0000 | |
| 5 | V | C | 1.0928 | |
| 6 | E | C | 0.2694 | |
| 7 | S | C | -0.4211 | |
| 8 | G | C | -0.8617 | |
| 9 | G | C | -0.3791 | |
| 10 | G | C | 0.3046 | |
| 11 | L | C | 1.2255 | |
| 12 | V | C | 0.0934 | |
| 13 | Q | C | -1.1888 | |
| 14 | P | C | -1.5157 | |
| 15 | G | C | -1.3144 | |
| 16 | G | C | -0.9498 | |
| 17 | S | C | -1.1840 | |
| 18 | L | C | -0.7376 | |
| 19 | R | C | -1.4865 | |
| 20 | L | C | 0.0000 | |
| 21 | S | C | -0.2523 | |
| 22 | C | C | 0.0000 | |
| 23 | A | C | -0.1765 | |
| 24 | A | C | 0.0000 | |
| 25 | S | C | -0.8980 | |
| 26 | G | C | -1.2231 | |
| 27 | F | C | -0.7281 | |
| 28 | T | C | -0.7027 | |
| 29 | L | C | 0.0000 | |
| 30 | S | C | -1.6410 | |
| 31 | D | C | -1.7988 | |
| 32 | Y | C | -0.4299 | |
| 33 | Y | C | -0.1088 | |
| 34 | M | C | 0.0000 | |
| 35 | S | C | 0.0000 | |
| 36 | W | C | 0.0000 | |
| 37 | V | C | 0.0000 | |
| 38 | R | C | 0.0000 | |
| 39 | Q | C | -0.5385 | |
| 40 | A | C | -1.1847 | |
| 41 | P | C | -1.1302 | |
| 42 | G | C | -1.4155 | |
| 43 | K | C | -2.0735 | |
| 44 | G | C | -0.9011 | |
| 45 | L | C | 0.5787 | |
| 46 | E | C | -0.1608 | |
| 47 | W | C | 0.3053 | |
| 48 | M | C | 0.0000 | |
| 49 | G | C | 0.0000 | |
| 50 | I | C | 0.0000 | |
| 51 | I | C | 0.0000 | |
| 52 | Y | C | -1.1027 | |
| 53 | P | C | -1.2660 | |
| 54 | G | C | -1.7135 | |
| 55 | D | C | -1.9710 | |
| 56 | S | C | -1.6901 | |
| 57 | D | C | -2.5193 | |
| 58 | T | C | -1.8695 | |
| 59 | R | C | -2.2821 | |
| 60 | Y | C | -1.1646 | |
| 61 | S | C | -0.8260 | |
| 62 | P | C | -0.9144 | |
| 63 | S | C | -0.8386 | |
| 64 | F | C | 0.0000 | |
| 65 | Q | C | -1.8420 | |
| 66 | G | C | -1.3621 | |
| 67 | H | C | -1.4239 | |
| 68 | V | C | 0.0000 | |
| 69 | T | C | -0.9342 | |
| 70 | I | C | 0.0000 | |
| 71 | S | C | -0.7451 | |
| 72 | R | C | 0.0000 | |
| 73 | D | C | -1.9122 | |
| 74 | D | C | -2.3091 | |
| 75 | S | C | -1.7172 | |
| 76 | K | C | -2.5022 | |
| 77 | N | C | -1.9422 | |
| 78 | T | C | 0.0000 | |
| 79 | L | C | 0.0000 | |
| 80 | Y | C | -0.3962 | |
| 81 | L | C | 0.0000 | |
| 82 | Q | C | -0.9988 | |
| 83 | M | C | 0.0000 | |
| 84 | N | C | -1.5380 | |
| 85 | S | C | -1.2193 | |
| 86 | L | C | 0.0000 | |
| 87 | R | C | -1.6093 | |
| 88 | A | C | -1.3655 | |
| 89 | E | C | -1.9759 | |
| 90 | D | C | 0.0000 | |
| 91 | T | C | -0.5560 | |
| 92 | A | C | 0.0000 | |
| 93 | V | C | 0.0758 | |
| 94 | Y | C | 0.0000 | |
| 95 | Y | C | 0.2488 | |
| 96 | C | C | 0.0000 | |
| 97 | T | C | 0.0000 | |
| 98 | R | C | 0.0000 | |
| 99 | W | C | -0.0212 | |
| 100 | G | C | -0.5345 | |
| 101 | A | C | -0.9072 | |
| 102 | G | C | -1.2787 | |
| 103 | K | C | -1.5747 | |
| 104 | D | C | -2.0581 | |
| 105 | V | C | -0.9984 | |
| 106 | W | C | -0.2056 | |
| 107 | G | C | -0.0728 | |
| 108 | Q | C | -0.8790 | |
| 109 | G | C | -0.3450 | |
| 110 | T | C | -0.2744 | |
| 111 | T | C | -0.1530 | |
| 112 | V | C | 0.0000 | |
| 113 | T | C | 0.0363 | |
| 114 | V | C | 0.0000 | |
| 115 | S | C | -0.6307 | |
| 116 | S | C | -0.6018 |