Project name: query_structure

Status: done

Started: 2026-03-16 22:59:45
Settings
Chain sequence(s) A: CIPKWNRCGPKMDGVPCCEPYTCTSDYYGNCS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:13)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:13)
Show buried residues

Minimal score value
-1.894
Maximal score value
0.8678
Average score
-0.7011
Total score value
-22.4348

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 C A 0.6859
2 I A -0.2617
3 P A -1.0671
4 K A -1.7790
5 W A -0.3722
6 N A -1.3958
7 R A -1.7731
8 C A 0.0000
9 G A 0.0000
10 P A -1.3098
11 K A -1.7570
12 M A -0.4564
13 D A -1.8209
14 G A -1.2874
15 V A -0.0761
16 P A -0.2585
17 C A 0.0000
18 C A -0.6899
19 E A -1.8940
20 P A -1.3692
21 Y A -0.7681
22 T A -0.5504
23 C A -0.5279
24 T A -0.4017
25 S A -0.8643
26 D A -1.5120
27 Y A 0.2391
28 Y A 0.8678
29 G A -0.2534
30 N A -1.1547
31 C A 0.0000
32 S A -0.6270
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Laboratory of Theory of Biopolymers 2018