| Chain sequence(s) |
A: CIPKWNRCGPKMDGVPCCEPYTCTSDYYGNCS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:13)
[INFO] Main: Simulation completed successfully. (00:00:13)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 0.6859 | |
| 2 | I | A | -0.2617 | |
| 3 | P | A | -1.0671 | |
| 4 | K | A | -1.7790 | |
| 5 | W | A | -0.3722 | |
| 6 | N | A | -1.3958 | |
| 7 | R | A | -1.7731 | |
| 8 | C | A | 0.0000 | |
| 9 | G | A | 0.0000 | |
| 10 | P | A | -1.3098 | |
| 11 | K | A | -1.7570 | |
| 12 | M | A | -0.4564 | |
| 13 | D | A | -1.8209 | |
| 14 | G | A | -1.2874 | |
| 15 | V | A | -0.0761 | |
| 16 | P | A | -0.2585 | |
| 17 | C | A | 0.0000 | |
| 18 | C | A | -0.6899 | |
| 19 | E | A | -1.8940 | |
| 20 | P | A | -1.3692 | |
| 21 | Y | A | -0.7681 | |
| 22 | T | A | -0.5504 | |
| 23 | C | A | -0.5279 | |
| 24 | T | A | -0.4017 | |
| 25 | S | A | -0.8643 | |
| 26 | D | A | -1.5120 | |
| 27 | Y | A | 0.2391 | |
| 28 | Y | A | 0.8678 | |
| 29 | G | A | -0.2534 | |
| 30 | N | A | -1.1547 | |
| 31 | C | A | 0.0000 | |
| 32 | S | A | -0.6270 |