Project name: f45bc80d43ed2e5

Status: done

Started: 2026-06-27 15:35:55
Settings
Chain sequence(s) A: KLVFFAE
C: KLVFFAE
B: KLVFFAE
E: KLVFFAE
D: KLVFFAE
G: KLVFFAE
F: KLVFFAE
I: KLVFFAE
H: KLVFFAE
K: KLVFFAE
J: KLVFFAE
L: KLVFFAE
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:19)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:21)
Show buried residues

Minimal score value
-3.0519
Maximal score value
3.9364
Average score
-0.1745
Total score value
-14.6572

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 K A -2.0408
2 L A -0.5405
3 V A 1.3033
4 F A 1.7382
5 F A 1.0071
6 A A -0.9271
7 E A -2.2077
1 K B -2.3414
2 L B 0.0000
3 V B 0.8173
4 F B 0.0000
5 F B 0.4807
6 A B 0.0000
7 E B -2.8291
1 K C -1.3805
2 L C 1.3726
3 V C 3.2686
4 F C 3.9364
5 F C 2.8418
6 A C 0.2713
7 E C -1.9937
1 K D -2.2391
2 L D 0.2656
3 V D 2.0860
4 F D 3.1729
5 F D 1.9083
6 A D -0.1948
7 E D -2.1854
1 K E -2.1066
2 L E -0.0819
3 V E 0.9240
4 F E 1.7972
5 F E 0.6806
6 A E -0.8611
7 E E -2.9162
1 K F -2.7186
2 L F -0.6242
3 V F 0.0000
4 F F 1.3249
5 F F 0.0000
6 A F -0.8281
7 E F -2.4670
1 K G -1.8765
2 L G -0.3007
3 V G 0.0000
4 F G 1.3059
5 F G 0.0000
6 A G -1.1147
7 E G -3.0021
1 K H -2.5509
2 L H -0.4434
3 V H 0.0000
4 F H 1.8721
5 F H 0.0000
6 A H -0.3698
7 E H -2.3835
1 K I -1.6512
2 L I 0.7566
3 V I 0.0000
4 F I 2.7661
5 F I 0.9329
6 A I -0.3837
7 E I -2.2555
1 K J -1.7897
2 L J 0.5283
3 V J 2.5566
4 F J 2.9028
5 F J 2.2715
6 A J -0.3488
7 E J -2.2118
1 K K -2.6412
2 L K 0.0000
3 V K 1.4538
4 F K 0.0000
5 F K 1.1374
6 A K 0.0000
7 E K -2.6498
1 K L -2.9098
2 L L 0.0000
3 V L 0.6134
4 F L 0.0000
5 F L 0.4674
6 A L 0.0000
7 E L -3.0519
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Laboratory of Theory of Biopolymers 2018