| Chain sequence(s) |
H: EVQLLESGGSLVQPGGSLRLSCAASGFTFYTYTMNWVRQAPGKGLEWVATIYYDGSNKFYADSVKGRFTISRDNSMDTLHLQMNSLRAEDTAVYYCVSAGWLDNWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCRTNQGISNDLGWYQQEPGKAPKRLIHSASDLESGVPSRFSGSASGTEFTLTISSLQPEDFATYYCLQYNDYPRTFGQGTKVEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:43)
[INFO] Main: Simulation completed successfully. (00:01:44)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.8627 | |
| 2 | V | H | -0.9229 | |
| 3 | Q | H | -1.0591 | |
| 4 | L | H | 0.0000 | |
| 5 | L | H | 0.9100 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.1994 | |
| 8 | G | H | -0.5010 | |
| 9 | G | H | 0.2518 | |
| 11 | S | H | 0.7274 | |
| 12 | L | H | 1.4177 | |
| 13 | V | H | -0.0367 | |
| 14 | Q | H | -1.3548 | |
| 15 | P | H | -1.6417 | |
| 16 | G | H | -1.4348 | |
| 17 | G | H | -1.1614 | |
| 18 | S | H | -1.1795 | |
| 19 | L | H | -0.8656 | |
| 20 | R | H | -1.9482 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.4732 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | 0.1739 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.7051 | |
| 27 | G | H | -0.9632 | |
| 28 | F | H | -0.0956 | |
| 29 | T | H | 0.4190 | |
| 30 | F | H | 0.0000 | |
| 35 | Y | H | 1.0534 | |
| 36 | T | H | 0.8713 | |
| 37 | Y | H | 1.0279 | |
| 38 | T | H | 0.0000 | |
| 39 | M | H | 0.0000 | |
| 40 | N | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.6758 | |
| 45 | A | H | -1.0651 | |
| 46 | P | H | -0.8413 | |
| 47 | G | H | -1.5399 | |
| 48 | K | H | -2.3643 | |
| 49 | G | H | -1.6227 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.9914 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | T | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | Y | H | -0.0049 | |
| 58 | Y | H | 0.5771 | |
| 59 | D | H | -1.0351 | |
| 62 | G | H | -1.0431 | |
| 63 | S | H | -1.2282 | |
| 64 | N | H | -1.5793 | |
| 65 | K | H | -1.0595 | |
| 66 | F | H | -0.2714 | |
| 67 | Y | H | -0.6421 | |
| 68 | A | H | -1.4114 | |
| 69 | D | H | -2.6285 | |
| 70 | S | H | -1.7478 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.5189 | |
| 74 | G | H | -1.6926 | |
| 75 | R | H | -1.3778 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.8260 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.5618 | |
| 80 | R | H | -0.6981 | |
| 81 | D | H | -1.0953 | |
| 82 | N | H | -0.6802 | |
| 83 | S | H | -0.2408 | |
| 84 | M | H | 0.2123 | |
| 85 | D | H | -0.4473 | |
| 86 | T | H | 0.0000 | |
| 87 | L | H | 0.0000 | |
| 88 | H | H | -0.8531 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.0991 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.2423 | |
| 93 | S | H | -1.1974 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.3543 | |
| 96 | A | H | -1.7338 | |
| 97 | E | H | -2.2556 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.3947 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.6240 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | V | H | 0.0000 | |
| 106 | S | H | 0.0000 | |
| 107 | A | H | 0.0000 | |
| 108 | G | H | 0.1752 | |
| 114 | W | H | 0.2612 | |
| 115 | L | H | 0.0000 | |
| 116 | D | H | -0.7707 | |
| 117 | N | H | -0.6860 | |
| 118 | W | H | -0.5181 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.1399 | |
| 121 | G | H | -0.1673 | |
| 122 | T | H | 0.5661 | |
| 123 | L | H | 1.5350 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.3160 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.5580 | |
| 128 | S | H | -0.5641 | |
| 1 | D | L | -2.5875 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -2.3995 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.5023 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.7741 | |
| 8 | P | L | -0.7231 | |
| 9 | S | L | -1.0339 | |
| 10 | S | L | -1.3351 | |
| 11 | L | L | -0.9234 | |
| 12 | S | L | -1.1112 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.1170 | |
| 15 | V | L | 0.8690 | |
| 16 | G | L | -0.4164 | |
| 17 | D | L | -1.2761 | |
| 18 | R | L | -2.1410 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.5893 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.6901 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.7218 | |
| 25 | T | L | 0.0000 | |
| 26 | N | L | -2.5256 | |
| 27 | Q | L | -2.5868 | |
| 28 | G | L | -1.9265 | |
| 29 | I | L | 0.0000 | |
| 36 | S | L | -1.2102 | |
| 37 | N | L | -1.4259 | |
| 38 | D | L | -1.1363 | |
| 39 | L | L | 0.0000 | |
| 40 | G | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | E | L | -1.5000 | |
| 46 | P | L | -1.0997 | |
| 47 | G | L | -1.6231 | |
| 48 | K | L | -2.4207 | |
| 49 | A | L | -1.5613 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.5165 | |
| 52 | R | L | -0.7845 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | H | L | -0.6021 | |
| 56 | S | L | -0.6963 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.8684 | |
| 66 | D | L | -0.9400 | |
| 67 | L | L | -0.2475 | |
| 68 | E | L | -0.6542 | |
| 69 | S | L | -0.5191 | |
| 70 | G | L | -0.4997 | |
| 71 | V | L | -0.3102 | |
| 72 | P | L | -0.3133 | |
| 74 | S | L | -0.4145 | |
| 75 | R | L | -0.7282 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.4524 | |
| 78 | G | L | -0.4409 | |
| 79 | S | L | -0.6988 | |
| 80 | A | L | -0.8711 | |
| 83 | S | L | -0.9281 | |
| 84 | G | L | -1.3257 | |
| 85 | T | L | -1.7629 | |
| 86 | E | L | -1.5864 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.5794 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.6412 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.3883 | |
| 93 | S | L | -1.0500 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.7312 | |
| 96 | P | L | -0.6031 | |
| 97 | E | L | -1.8379 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.7472 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | 0.0000 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | L | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | Y | L | -0.5015 | |
| 108 | N | L | -1.2794 | |
| 109 | D | L | -1.2937 | |
| 114 | Y | L | -0.2848 | |
| 115 | P | L | -0.8039 | |
| 116 | R | L | 0.0000 | |
| 117 | T | L | -0.8564 | |
| 118 | F | L | -0.4567 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.6041 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -2.2696 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | -1.6834 | |
| 126 | I | L | 0.5940 | |
| 127 | K | L | -0.9758 |