Project name: OHRacle_PhlD_8cf0a_relaxed_rank_001_alphafold2_multimer_v3_model_1_seed_000_1753188150

Status: done

Started: 2025-07-22 12:42:33
Settings
Chain sequence(s) A: MSTLCLPHVMFPQHKITQQQMVDHLENLHADHPRMALAKRMIANTEVNERHLVLPIDELAVHTGFTHRSIVYEREARQMSSAAARQAIENAGLQISDIRMVIVTSCTGFMMPSLTAHLINDLALPTSTVQLPIAQLGCVAGAAAINRANDFARLDARNHVLIVSLEFSSLCYQPDDTKLHAFISAALFGDAVSACVLRADDQAGGFKIKKTESYFLPKSEHYIKYDVKDTGFHFTLDKAVMNSIKDVAPVMERLNYESFEQNCAHNDFFIFHTGGRKILDELVMHLDLASNRVSQSRSSLSEAGNIASVVVFDVLKRQFDSNLNRGDIGLLAAFGPGFTAEMAVGEWTA
B: MSTLCLPHVMFPQHKITQQQMVDHLENLHADHPRMALAKRMIANTEVNERHLVLPIDELAVHTGFTHRSIVYEREARQMSSAAARQAIENAGLQISDIRMVIVTSCTGFMMPSLTAHLINDLALPTSTVQLPIAQLGCVAGAAAINRANDFARLDARNHVLIVSLEFSSLCYQPDDTKLHAFISAALFGDAVSACVLRADDQAGGFKIKKTESYFLPKSEHYIKYDVKDTGFHFTLDKAVMNSIKDVAPVMERLNYESFEQNCAHNDFFIFHTGGRKILDELVMHLDLASNRVSQSRSSLSEAGNIASVVVFDVLKRQFDSNLNRGDIGLLAAFGPGFTAEMAVGEWTA
input PDB
Selected Chain(s) A,B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:09:35)
[INFO]       Main:     Simulation completed successfully.                                          (00:09:40)
Show buried residues

Minimal score value
-3.2396
Maximal score value
0.7786
Average score
-0.6733
Total score value
-469.9636

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A -0.2547
2 S A 0.0000
3 T A 0.0000
4 L A 0.0000
5 C A 0.0000
6 L A -0.2029
7 P A 0.0000
8 H A -0.7195
9 V A 0.1849
10 M A 0.3520
11 F A 0.1756
12 P A 0.0000
13 Q A -1.5547
14 H A -1.5208
15 K A -2.3056
16 I A 0.0000
17 T A -2.3205
18 Q A -2.2990
19 Q A -2.5911
20 Q A -2.5955
21 M A 0.0000
22 V A 0.0000
23 D A -2.7730
24 H A -2.0273
25 L A 0.0000
26 E A -2.4187
27 N A -2.0457
28 L A -1.0104
29 H A -1.5428
30 A A -1.6726
31 D A -2.3969
32 H A -1.9358
33 P A -1.5781
34 R A -2.2215
35 M A 0.0000
36 A A -0.9817
37 L A -0.6093
38 A A 0.0000
39 K A -2.1114
40 R A -2.0917
41 M A -1.3105
42 I A 0.0000
43 A A -2.0933
44 N A -2.5004
45 T A 0.0000
46 E A -3.1208
47 V A 0.0000
48 N A -2.8281
49 E A -2.8721
50 R A 0.0000
51 H A -1.3743
52 L A 0.0000
53 V A 0.0000
54 L A -0.7380
55 P A -1.2408
56 I A -0.9986
57 D A -1.7281
58 E A -1.2070
59 L A 0.0000
60 A A -0.2397
61 V A 0.7786
62 H A 0.1197
63 T A 0.0854
64 G A -0.5069
65 F A 0.0000
66 T A -0.6265
67 H A -0.0535
68 R A 0.0000
69 S A -0.2033
70 I A 0.5218
71 V A 0.0000
72 Y A 0.0000
73 E A -1.6848
74 R A -2.5367
75 E A -1.9778
76 A A 0.0000
77 R A -2.2848
78 Q A -2.3909
79 M A 0.0000
80 S A 0.0000
81 S A -1.4176
82 A A -1.1373
83 A A 0.0000
84 A A 0.0000
85 R A -2.5496
86 Q A -2.1190
87 A A 0.0000
88 I A 0.0000
89 E A -2.9090
90 N A -1.6988
91 A A 0.0000
92 G A -1.6828
93 L A 0.0000
94 Q A -1.8326
95 I A -0.9994
96 S A -0.8213
97 D A -1.4892
98 I A 0.0000
99 R A -1.4287
100 M A 0.0000
101 V A 0.0000
102 I A 0.0000
103 V A 0.0000
104 T A 0.0000
105 S A 0.0000
106 C A 0.0000
107 T A 0.0000
108 G A 0.0000
109 F A 0.0000
110 M A 0.0000
111 M A 0.0000
112 P A 0.0000
113 S A 0.0000
114 L A 0.0000
115 T A 0.0000
116 A A 0.0000
117 H A 0.0000
118 L A 0.0000
119 I A 0.0000
120 N A -1.5206
121 D A -2.2902
122 L A 0.0000
123 A A -0.5177
124 L A 0.0000
125 P A -0.4037
126 T A -0.3060
127 S A -0.4344
128 T A 0.0000
129 V A 0.0000
130 Q A 0.0000
131 L A 0.0000
132 P A 0.0000
133 I A 0.0000
134 A A 0.0000
135 Q A 0.0000
136 L A 0.0000
137 G A 0.0000
138 C A 0.0000
139 V A 0.0000
140 A A 0.0000
141 G A 0.0000
142 A A 0.0000
143 A A 0.0000
144 A A 0.0000
145 I A 0.0000
146 N A 0.0000
147 R A 0.0000
148 A A 0.0000
149 N A 0.0000
150 D A -0.4868
151 F A 0.0000
152 A A 0.0000
153 R A -1.1545
154 L A -0.8745
155 D A -1.2135
156 A A -1.4150
157 R A -2.3667
158 N A 0.0000
159 H A 0.0000
160 V A 0.0000
161 L A 0.0000
162 I A 0.0000
163 V A 0.0000
164 S A 0.0000
165 L A 0.0000
166 E A 0.0000
167 F A 0.0000
168 S A 0.0533
169 S A 0.0000
170 L A 0.0000
171 C A 0.1088
172 Y A 0.0386
173 Q A -0.5266
174 P A 0.0000
175 D A -1.9223
176 D A -1.7843
177 T A -1.7191
178 K A -2.3309
179 L A -1.1187
180 H A -1.2853
181 A A -0.9647
182 F A 0.0000
183 I A -0.5119
184 S A 0.0636
185 A A 0.0307
186 A A 0.0000
187 L A 0.0000
188 F A 0.0000
189 G A 0.0000
190 D A 0.0000
191 A A 0.0000
192 V A 0.0000
193 S A 0.0000
194 A A 0.0000
195 C A 0.0000
196 V A 0.0000
197 L A 0.0000
198 R A 0.0000
199 A A 0.0000
200 D A -1.8759
201 D A -2.3588
202 Q A -2.1978
203 A A -1.2742
204 G A -0.7973
205 G A 0.0000
206 F A 0.0000
207 K A -0.8725
208 I A 0.0000
209 K A -1.0026
210 K A -1.4750
211 T A -0.8115
212 E A -0.5732
213 S A 0.0000
214 Y A -0.0344
215 F A 0.0000
216 L A -0.5259
217 P A -1.0481
218 K A -2.1251
219 S A 0.0000
220 E A -1.5993
221 H A -1.6834
222 Y A -1.3148
223 I A 0.0000
224 K A -1.1304
225 Y A 0.0000
226 D A -1.1365
227 V A 0.0000
228 K A -1.4468
229 D A -1.7287
230 T A -1.0663
231 G A 0.0000
232 F A 0.0000
233 H A -0.5870
234 F A -0.1215
235 T A -0.7637
236 L A -0.8163
237 D A -1.8151
238 K A -2.2096
239 A A -1.4100
240 V A 0.0000
241 M A -1.4739
242 N A -2.0829
243 S A 0.0000
244 I A 0.0000
245 K A -2.2374
246 D A -1.7384
247 V A 0.0000
248 A A 0.0000
249 P A -1.1172
250 V A -0.7402
251 M A 0.0000
252 E A -1.6306
253 R A -2.4243
254 L A -1.6258
255 N A 0.0000
256 Y A -1.6527
257 E A -2.5823
258 S A 0.0000
259 F A -1.0685
260 E A -2.3488
261 Q A -1.9012
262 N A -2.1809
263 C A 0.0000
264 A A -1.6237
265 H A -1.7613
266 N A 0.0000
267 D A -1.6747
268 F A 0.0000
269 F A 0.0000
270 I A 0.0000
271 F A 0.0000
272 H A 0.0000
273 T A 0.0000
274 G A -0.3210
275 G A 0.0000
276 R A -1.8507
277 K A -1.6889
278 I A 0.0000
279 L A 0.0000
280 D A -0.5142
281 E A 0.0000
282 L A 0.0000
283 V A -0.4319
284 M A -0.0087
285 H A -1.1414
286 L A 0.0000
287 D A -1.7890
288 L A 0.0000
289 A A -0.9193
290 S A -1.0934
291 N A -1.7110
292 R A -1.4317
293 V A 0.0000
294 S A -1.0833
295 Q A -0.9170
296 S A 0.0000
297 R A -1.5538
298 S A -1.2849
299 S A 0.0000
300 L A 0.0000
301 S A -2.3011
302 E A -2.6410
303 A A 0.0000
304 G A 0.0000
305 N A 0.0000
306 I A 0.0000
307 A A 0.0000
308 S A 0.0000
309 V A 0.0000
310 V A 0.0000
311 V A 0.0000
312 F A 0.0000
313 D A 0.0000
314 V A 0.0000
315 L A 0.0000
316 K A -0.8248
317 R A -1.0305
318 Q A 0.0000
319 F A -0.7839
320 D A -2.0062
321 S A -1.6459
322 N A -1.7925
323 L A -1.8104
324 N A -2.6395
325 R A -2.6230
326 G A -1.7503
327 D A -1.6202
328 I A -1.0139
329 G A 0.0000
330 L A 0.0000
331 L A 0.0000
332 A A 0.0000
333 A A 0.0000
334 F A 0.0000
335 G A 0.0000
336 P A 0.0000
337 G A 0.0000
338 F A 0.0000
339 T A 0.0000
340 A A 0.0000
341 E A 0.0000
342 M A 0.0000
343 A A 0.0000
344 V A 0.0000
345 G A 0.0000
346 E A -1.3549
347 W A 0.0000
348 T A -1.5537
349 A A -1.0322
1 M B -0.2621
2 S B 0.0000
3 T B 0.0000
4 L B 0.0000
5 C B 0.0000
6 L B -0.1758
7 P B 0.0000
8 H B -0.7330
9 V B 0.1754
10 M B 0.3510
11 F B 0.1682
12 P B 0.0000
13 Q B -1.5713
14 H B -1.5596
15 K B -2.3288
16 I B 0.0000
17 T B -2.3107
18 Q B -2.2170
19 Q B -2.5730
20 Q B -2.5706
21 M B 0.0000
22 V B 0.0000
23 D B -2.6688
24 H B -1.9726
25 L B 0.0000
26 E B -2.3220
27 N B -1.9841
28 L B -0.9579
29 H B -1.4960
30 A B -1.6377
31 D B -2.3868
32 H B -1.9375
33 P B -1.5962
34 R B -2.2879
35 M B 0.0000
36 A B -1.0343
37 L B -0.7431
38 A B 0.0000
39 K B -2.0976
40 R B -2.0994
41 M B -1.2417
42 I B 0.0000
43 A B -1.9454
44 N B -2.2622
45 T B 0.0000
46 E B -2.5385
47 V B 0.0000
48 N B -2.6666
49 E B -2.7785
50 R B 0.0000
51 H B -1.3740
52 L B 0.0000
53 V B 0.0000
54 L B -0.7816
55 P B -1.3390
56 I B -1.1001
57 D B -1.8127
58 E B -1.3373
59 L B 0.0000
60 A B -0.2902
61 V B 0.7429
62 H B 0.0991
63 T B 0.0585
64 G B -0.5374
65 F B 0.0000
66 T B -0.7413
67 H B -0.2030
68 R B 0.0000
69 S B -0.4663
70 I B 0.0635
71 V B -0.4218
72 Y B 0.0000
73 E B -2.4612
74 R B -3.0942
75 E B -2.4233
76 A B 0.0000
77 R B -3.2396
78 Q B -2.7947
79 M B 0.0000
80 S B 0.0000
81 S B 0.0000
82 A B -1.1635
83 A B 0.0000
84 A B 0.0000
85 R B -2.5014
86 Q B -2.1427
87 A B 0.0000
88 I B 0.0000
89 E B -2.8729
90 N B -1.6652
91 A B 0.0000
92 G B -1.6013
93 L B -1.2336
94 Q B -1.7153
95 I B -0.9319
96 S B -0.7328
97 D B -1.3190
98 I B 0.0000
99 R B -1.3816
100 M B 0.0000
101 V B 0.0000
102 I B 0.0000
103 V B 0.0000
104 T B 0.0000
105 S B 0.0000
106 C B 0.0000
107 T B 0.0000
108 G B 0.0000
109 F B 0.0000
110 M B 0.0000
111 M B 0.0000
112 P B 0.0000
113 S B 0.0000
114 L B 0.0000
115 T B 0.0000
116 A B 0.0000
117 H B -0.9940
118 L B 0.0000
119 I B 0.0000
120 N B -1.0413
121 D B -1.4027
122 L B 0.0000
123 A B -0.2011
124 L B 0.0000
125 P B -0.3519
126 T B -0.2033
127 S B -0.3061
128 T B 0.0000
129 V B 0.0000
130 Q B 0.0000
131 L B 0.0000
132 P B 0.0000
133 I B 0.0000
134 A B 0.0000
135 Q B 0.0000
136 L B 0.0000
137 G B 0.0000
138 C B 0.0000
139 V B 0.0000
140 A B 0.0000
141 G B 0.0000
142 A B 0.0000
143 A B 0.0000
144 A B 0.0000
145 I B 0.0000
146 N B 0.0000
147 R B 0.0000
148 A B 0.0000
149 N B 0.0000
150 D B -0.6416
151 F B 0.0000
152 A B 0.0000
153 R B -1.7981
154 L B -0.9497
155 D B -1.3173
156 A B -1.4809
157 R B -2.3885
158 N B 0.0000
159 H B 0.0000
160 V B 0.0000
161 L B 0.0000
162 I B 0.0000
163 V B 0.0000
164 S B 0.0000
165 L B 0.0000
166 E B 0.0000
167 F B 0.0000
168 S B 0.0626
169 S B 0.0000
170 L B 0.0000
171 C B 0.1277
172 Y B 0.0444
173 Q B -0.5206
174 P B 0.0000
175 D B -1.9053
176 D B -1.7850
177 T B -1.7551
178 K B -2.4305
179 L B -1.3874
180 H B -1.4617
181 A B -1.0778
182 F B 0.0000
183 I B -0.5720
184 S B 0.0115
185 A B 0.0018
186 A B 0.0000
187 L B 0.0000
188 F B 0.0000
189 G B 0.0000
190 D B 0.0000
191 A B 0.0000
192 V B 0.0000
193 S B 0.0000
194 A B 0.0000
195 C B 0.0000
196 V B 0.0000
197 L B 0.0000
198 R B 0.0000
199 A B 0.0000
200 D B -1.8907
201 D B -2.2695
202 Q B -2.1869
203 A B -1.2354
204 G B -0.7933
205 G B 0.0000
206 F B 0.0000
207 K B -0.8999
208 I B 0.0000
209 K B -1.3172
210 K B -1.6466
211 T B -0.9911
212 E B -0.8346
213 S B 0.0000
214 Y B 0.0000
215 F B 0.0000
216 L B 0.0000
217 P B -1.2692
218 K B -2.2471
219 S B 0.0000
220 E B -1.3796
221 H B -1.4797
222 Y B -1.0726
223 I B 0.0000
224 K B -1.0298
225 Y B 0.0000
226 D B -1.1462
227 V B 0.0000
228 K B -1.3530
229 D B -1.6927
230 T B -1.0512
231 G B 0.0000
232 F B 0.0000
233 H B -0.5909
234 F B -0.1463
235 T B -0.6933
236 L B -0.5842
237 D B -1.3767
238 K B -1.9492
239 A B -1.1470
240 V B 0.0000
241 M B -1.0947
242 N B -1.6145
243 S B 0.0000
244 I B 0.0000
245 K B -1.8148
246 D B -1.7161
247 V B 0.0000
248 A B 0.0000
249 P B -1.0833
250 V B -0.7683
251 M B 0.0000
252 E B -1.5460
253 R B -2.3691
254 L B 0.0000
255 N B 0.0000
256 Y B -1.3701
257 E B -2.4781
258 S B -1.5364
259 F B -1.0335
260 E B -2.2209
261 Q B -1.7660
262 N B -1.9948
263 C B 0.0000
264 A B -1.6782
265 H B -1.8825
266 N B 0.0000
267 D B -2.3111
268 F B 0.0000
269 F B 0.0000
270 I B 0.0000
271 F B 0.0000
272 H B 0.0000
273 T B 0.0000
274 G B -0.2637
275 G B 0.0000
276 R B -1.5214
277 K B -1.3587
278 I B 0.0000
279 L B 0.0000
280 D B -0.4694
281 E B 0.0000
282 L B 0.0000
283 V B -0.4134
284 M B 0.0804
285 H B -0.9543
286 L B 0.0000
287 D B -1.7334
288 L B 0.0000
289 A B -0.8501
290 S B -1.1244
291 N B -1.7466
292 R B -1.6041
293 V B 0.0000
294 S B -1.1346
295 Q B -0.9500
296 S B 0.0000
297 R B -1.4027
298 S B -1.2056
299 S B 0.0000
300 L B 0.0000
301 S B -2.0782
302 E B -2.5088
303 A B 0.0000
304 G B 0.0000
305 N B 0.0000
306 I B 0.0000
307 A B 0.0000
308 S B 0.0000
309 V B 0.0000
310 V B 0.0000
311 V B 0.0000
312 F B 0.0000
313 D B 0.0000
314 V B 0.0000
315 L B 0.0000
316 K B -0.8813
317 R B -1.0865
318 Q B 0.0000
319 F B -0.7812
320 D B -2.0069
321 S B -1.6471
322 N B -1.7802
323 L B -1.9132
324 N B -2.7314
325 R B -2.6620
326 G B -1.9055
327 D B -1.8523
328 I B -1.2126
329 G B 0.0000
330 L B 0.0000
331 L B 0.0000
332 A B 0.0000
333 A B 0.0000
334 F B 0.0000
335 G B 0.0000
336 P B 0.0000
337 G B 0.0000
338 F B 0.0000
339 T B 0.0000
340 A B 0.0000
341 E B 0.0000
342 M B 0.0000
343 A B 0.0000
344 V B 0.0000
345 G B 0.0000
346 E B -1.5135
347 W B 0.0000
348 T B -1.5692
349 A B -1.0800
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Laboratory of Theory of Biopolymers 2018