| Chain sequence(s) |
A: SVEDDIRFLEKVKEYLEEEAARLYAENPEEARKYRDTYLTEIDLLIARLRGDAAEAAALEAERAA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:29)
[INFO] Main: Simulation completed successfully. (00:01:29)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | -1.3520 | |
| 2 | V | A | -1.0002 | |
| 3 | E | A | -2.9432 | |
| 4 | D | A | -3.2256 | |
| 5 | D | A | -2.5091 | |
| 6 | I | A | -2.5045 | |
| 7 | R | A | -3.0851 | |
| 8 | F | A | -1.1517 | |
| 9 | L | A | 0.0000 | |
| 10 | E | A | -2.7652 | |
| 11 | K | A | -2.7248 | |
| 12 | V | A | -1.3341 | |
| 13 | K | A | -2.6645 | |
| 14 | E | A | -3.2844 | |
| 15 | Y | A | -1.7832 | |
| 16 | L | A | -2.2202 | |
| 17 | E | A | -3.6700 | |
| 18 | E | A | -3.4557 | |
| 19 | E | A | -2.7136 | |
| 20 | A | A | 0.0000 | |
| 21 | A | A | -2.2230 | |
| 22 | R | A | -2.7685 | |
| 23 | L | A | -2.2022 | |
| 24 | Y | A | -1.5762 | |
| 25 | A | A | -1.0044 | |
| 26 | E | A | -2.3823 | |
| 27 | N | A | -2.2948 | |
| 28 | P | A | -2.3178 | |
| 29 | E | A | -3.5981 | |
| 30 | E | A | -3.7093 | |
| 31 | A | A | 0.0000 | |
| 32 | R | A | -3.7947 | |
| 33 | K | A | -3.9506 | |
| 34 | Y | A | -2.4681 | |
| 35 | R | A | -3.3110 | |
| 36 | D | A | -3.5993 | |
| 37 | T | A | -1.8158 | |
| 38 | Y | A | -0.8125 | |
| 39 | L | A | 0.0000 | |
| 40 | T | A | -1.7755 | |
| 41 | E | A | -1.6814 | |
| 42 | I | A | -0.5777 | |
| 43 | D | A | -1.1459 | |
| 44 | L | A | -1.5001 | |
| 45 | L | A | -0.6941 | |
| 46 | I | A | 0.0000 | |
| 47 | A | A | 0.0000 | |
| 48 | R | A | -2.6559 | |
| 49 | L | A | -1.7026 | |
| 50 | R | A | -2.8416 | |
| 51 | G | A | -2.4740 | |
| 52 | D | A | -2.6758 | |
| 53 | A | A | -1.5987 | |
| 54 | A | A | -1.3383 | |
| 55 | E | A | -2.4701 | |
| 56 | A | A | -2.3059 | |
| 57 | A | A | -1.6013 | |
| 58 | A | A | -1.4287 | |
| 59 | L | A | -2.0310 | |
| 60 | E | A | -2.9221 | |
| 61 | A | A | -1.9871 | |
| 62 | E | A | -2.8688 | |
| 63 | R | A | -2.7689 | |
| 64 | A | A | -1.3379 | |
| 65 | A | A | -1.0125 |