Project name: RFC26

Status: done

Started: 2025-07-15 15:51:40
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Chain sequence(s) A: MKQTTTTSSSTTQLPLEGNVKETVTTTTVNTTIESDKETATVNTTQTVTRAPSASVSLRVEPSISAQGTAEIEEVDLSSQVSQAAPNTLVGQVNIKVKTKKKGTVNVTVTFITTTTTYLP
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:14)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:15)
Show buried residues

Minimal score value
-4.9044
Maximal score value
1.3484
Average score
-0.9469
Total score value
-113.6285

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A -1.5971
2 K A -2.3352
3 Q A -1.7901
4 T A -1.1949
5 T A -0.5157
6 T A -0.4351
7 T A -0.3984
8 S A -0.4955
9 S A -0.4248
10 S A -0.3371
11 T A -0.3567
12 T A -0.5652
13 Q A -1.0577
14 L A -0.2603
15 P A -0.7951
16 L A -0.6859
17 E A -2.0201
18 G A -1.4653
19 N A -0.9949
20 V A -0.1757
21 K A -0.6002
22 E A -0.3557
23 T A -0.4650
24 V A -0.0616
25 T A -0.1305
26 T A -0.1919
27 T A -0.1947
28 T A -0.4632
29 V A 0.0000
30 N A -0.6901
31 T A 0.0000
32 T A -1.1848
33 I A 0.0000
34 E A -3.3731
35 S A 0.0000
36 D A -4.7105
37 K A -4.9044
38 E A -3.5391
39 T A -1.9614
40 A A 0.0000
41 T A -1.0813
42 V A 0.0000
43 N A -1.8012
44 T A -1.1162
45 T A -0.8160
46 Q A -0.1390
47 T A -0.1069
48 V A -0.1194
49 T A -0.4523
50 R A -0.8058
51 A A -0.5040
52 P A -0.6130
53 S A 0.0454
54 A A 0.0000
55 S A -0.2581
56 V A -0.1238
57 S A -0.2809
58 L A -0.4369
59 R A -1.8879
60 V A -1.5539
61 E A -2.1180
62 P A -1.1218
63 S A -0.3699
64 I A 0.3338
65 S A -0.2766
66 A A -0.7627
67 Q A -1.5969
68 G A -1.4452
69 T A -1.4518
70 A A -2.7417
71 E A -2.8546
72 I A -2.1569
73 E A -3.2152
74 E A -2.6217
75 V A -0.9380
76 D A -1.4995
77 L A -0.4286
78 S A -1.1303
79 S A -1.1031
80 Q A -1.4624
81 V A -0.2877
82 S A -0.4878
83 Q A -1.0083
84 A A -0.4365
85 A A -0.6338
86 P A -0.8056
87 N A -1.0332
88 T A -0.6344
89 L A -0.2639
90 V A -0.3252
91 G A 0.0000
92 Q A -1.3005
93 V A 0.0000
94 N A -1.8203
95 I A 0.0000
96 K A -1.5096
97 V A 0.0000
98 K A -3.1465
99 T A 0.0000
100 K A -4.1478
101 K A -4.3911
102 K A -4.4196
103 G A -2.9989
104 T A -2.3685
105 V A 0.0000
106 N A -0.8892
107 V A 0.0000
108 T A -0.5353
109 V A 0.0000
110 T A -0.9553
111 F A 0.0000
112 I A -0.5135
113 T A 0.0000
114 T A -0.2992
115 T A -0.1793
116 T A 0.0997
117 T A 0.4614
118 Y A 1.3484
119 L A 1.1793
120 P A 0.4130
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Laboratory of Theory of Biopolymers 2018