| Chain sequence(s) |
A: AHTSVTCPEGWSECGVAIYGYACGRWGCGHFLNSGPNISPYV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | AA1A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 0.0 kcal/mol |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] FoldX: Building mutant model (00:00:10)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:11)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:21)
[INFO] Main: Simulation completed successfully. (00:00:21)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.4657 | mutated: AA1A |
| 2 | H | A | -0.9230 | |
| 3 | T | A | -0.4845 | |
| 4 | S | A | -0.5357 | |
| 5 | V | A | -0.1008 | |
| 6 | T | A | -0.3996 | |
| 7 | C | A | -1.0013 | |
| 8 | P | A | -1.4516 | |
| 9 | E | A | -2.2760 | |
| 10 | G | A | -1.7495 | |
| 11 | W | A | -1.5710 | |
| 12 | S | A | -1.5327 | |
| 13 | E | A | -1.9211 | |
| 14 | C | A | -0.3237 | |
| 15 | G | A | 0.4799 | |
| 16 | V | A | 1.2768 | |
| 17 | A | A | 1.5103 | |
| 18 | I | A | 2.3435 | |
| 19 | Y | A | 1.5702 | |
| 20 | G | A | 1.2814 | |
| 21 | Y | A | 0.0000 | |
| 22 | A | A | 0.0000 | |
| 23 | C | A | 0.0000 | |
| 24 | G | A | 0.0000 | |
| 25 | R | A | -1.9628 | |
| 26 | W | A | -0.0243 | |
| 27 | G | A | -0.6857 | |
| 28 | C | A | 0.0369 | |
| 29 | G | A | 0.3193 | |
| 30 | H | A | 0.4891 | |
| 31 | F | A | 2.2130 | |
| 32 | L | A | 1.8181 | |
| 33 | N | A | 0.4914 | |
| 34 | S | A | 0.2457 | |
| 35 | G | A | -0.2712 | |
| 36 | P | A | -0.7527 | |
| 37 | N | A | -0.7637 | |
| 38 | I | A | -0.0102 | |
| 39 | S | A | 0.8048 | |
| 40 | P | A | 0.8200 | |
| 41 | Y | A | 1.6451 | |
| 42 | V | A | 2.1199 |