| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFEDIVVDGKVLVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTAPLHGGADVRVAFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRNGPEGHPLPDAPPPSPLYTPPPASSPYAVRPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPKNNVYDPANFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9435 | |
| 2 | L | A | 1.9726 | |
| 3 | P | A | 0.7122 | |
| 4 | P | A | 0.1195 | |
| 5 | T | A | 0.2220 | |
| 6 | T | A | 0.1559 | |
| 7 | P | A | 0.2617 | |
| 8 | V | A | 1.2485 | |
| 9 | A | A | 0.0616 | |
| 10 | K | A | -1.1076 | |
| 11 | V | A | -0.3301 | |
| 12 | Q | A | -1.4459 | |
| 13 | S | A | -1.6300 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.6247 | |
| 16 | E | A | -2.5460 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4247 | |
| 20 | P | A | 0.0710 | |
| 21 | T | A | 0.0997 | |
| 22 | S | A | -0.1808 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1318 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2484 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7490 | |
| 31 | R | A | -2.6799 | |
| 32 | L | A | -0.8427 | |
| 33 | L | A | 1.0910 | |
| 34 | T | A | 1.3865 | |
| 35 | V | A | 1.9531 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2614 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.7200 | |
| 40 | E | A | -2.0115 | |
| 41 | D | A | -0.8237 | |
| 42 | I | A | 1.2986 | |
| 43 | V | A | 2.1552 | |
| 44 | V | A | 1.4034 | |
| 45 | D | A | -1.0608 | |
| 46 | G | A | -0.6134 | |
| 47 | K | A | -0.2643 | |
| 48 | V | A | 2.1515 | |
| 49 | L | A | 2.4928 | |
| 50 | V | A | 1.4541 | |
| 51 | P | A | 0.3165 | |
| 52 | K | A | -0.7313 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.2142 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4448 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.3272 | |
| 70 | K | A | -1.8619 | |
| 71 | F | A | -0.9107 | |
| 72 | A | A | -0.5878 | |
| 73 | L | A | -0.8562 | |
| 74 | P | A | -1.2554 | |
| 75 | Q | A | -2.4838 | |
| 76 | K | A | -3.0943 | |
| 77 | D | A | -2.9808 | |
| 78 | F | A | -1.6673 | |
| 79 | Y | A | -1.9040 | |
| 80 | D | A | -2.6773 | |
| 81 | P | A | -2.3102 | |
| 82 | E | A | -3.0204 | |
| 83 | K | A | -3.3764 | |
| 84 | E | A | -2.4377 | |
| 85 | R | A | -1.2679 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6282 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -1.0470 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.4079 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7614 | |
| 99 | G | A | -0.5858 | |
| 100 | P | A | -0.4163 | |
| 101 | L | A | -0.0186 | |
| 102 | G | A | -0.4181 | |
| 103 | K | A | -0.7145 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4286 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1642 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4979 | |
| 110 | L | A | 0.5586 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -0.8920 | |
| 113 | K | A | 0.0034 | |
| 114 | L | A | -0.7389 | |
| 115 | G | A | -0.7136 | |
| 116 | D | A | -1.1746 | |
| 117 | T | A | -1.0901 | |
| 118 | E | A | -2.4163 | |
| 119 | N | A | -2.3388 | |
| 120 | P | A | -1.4794 | |
| 121 | T | A | -0.8345 | |
| 122 | A | A | -0.4328 | |
| 123 | P | A | 0.0146 | |
| 124 | L | A | -0.1817 | |
| 125 | H | A | -0.8381 | |
| 126 | G | A | -1.4316 | |
| 127 | G | A | -1.4261 | |
| 128 | A | A | -1.0726 | |
| 129 | D | A | -1.7619 | |
| 130 | V | A | -0.8167 | |
| 131 | R | A | -0.4897 | |
| 132 | V | A | 0.7320 | |
| 133 | A | A | 0.5777 | |
| 134 | F | A | 0.3757 | |
| 135 | S | A | -0.0970 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.7368 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.2234 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5463 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2234 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.0734 | |
| 157 | D | A | 0.3496 | |
| 158 | I | A | 0.7910 | |
| 159 | A | A | 0.0335 | |
| 160 | E | A | -1.5024 | |
| 161 | P | A | -0.2723 | |
| 162 | C | A | 0.1795 | |
| 163 | P | A | -0.1931 | |
| 164 | G | A | -0.1236 | |
| 165 | L | A | 0.5027 | |
| 166 | P | A | -0.1720 | |
| 167 | P | A | -0.3667 | |
| 168 | G | A | -0.4383 | |
| 169 | A | A | -0.0497 | |
| 170 | C | A | 0.7157 | |
| 171 | P | A | 0.5503 | |
| 172 | P | A | 0.6768 | |
| 173 | I | A | 1.7406 | |
| 174 | Q | A | 0.7027 | |
| 175 | L | A | 1.3100 | |
| 176 | V | A | 0.7854 | |
| 177 | N | A | -0.3213 | |
| 178 | S | A | -0.0257 | |
| 179 | V | A | 0.3548 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3849 | |
| 182 | D | A | 0.1253 | |
| 183 | G | A | -0.1558 | |
| 184 | D | A | -0.5275 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | -0.4162 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1242 | |
| 190 | F | A | 0.0581 | |
| 191 | G | A | -0.2277 | |
| 192 | N | A | -0.2813 | |
| 193 | M | A | -0.1123 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.2349 | |
| 197 | E | A | -2.4020 | |
| 198 | L | A | -1.0952 | |
| 199 | Q | A | -2.3945 | |
| 200 | Q | A | -3.1730 | |
| 201 | D | A | -3.3641 | |
| 202 | R | A | -3.2103 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1423 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3464 | |
| 211 | S | A | -1.8475 | |
| 212 | T | A | -1.3871 | |
| 213 | R | A | -1.9275 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.2015 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2937 | |
| 220 | L | A | 0.5394 | |
| 221 | K | A | -1.2401 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9043 | |
| 224 | N | A | -1.6340 | |
| 225 | E | A | -1.2496 | |
| 226 | A | A | -0.7789 | |
| 227 | Y | A | -0.3960 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6669 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.0860 | |
| 234 | F | A | 0.1934 | |
| 235 | G | A | -0.7293 | |
| 236 | R | A | -2.2328 | |
| 237 | R | A | -2.5879 | |
| 238 | E | A | -1.5620 | |
| 239 | Q | A | 0.1780 | |
| 240 | V | A | 1.5382 | |
| 241 | Y | A | 0.9031 | |
| 242 | A | A | -0.0081 | |
| 243 | R | A | -1.3443 | |
| 244 | H | A | -1.1013 | |
| 245 | F | A | 0.0092 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.8141 | |
| 249 | N | A | -1.2802 | |
| 250 | G | A | -0.9710 | |
| 251 | P | A | -1.0836 | |
| 252 | E | A | -1.3439 | |
| 253 | G | A | -1.2356 | |
| 254 | H | A | -1.4218 | |
| 255 | P | A | -1.3014 | |
| 256 | L | A | -0.3466 | |
| 257 | P | A | -0.9011 | |
| 258 | D | A | -1.7382 | |
| 259 | A | A | -0.7765 | |
| 260 | P | A | -0.8492 | |
| 261 | P | A | -0.7793 | |
| 262 | P | A | -0.3050 | |
| 263 | S | A | -0.1967 | |
| 264 | P | A | 0.4261 | |
| 265 | L | A | 1.3399 | |
| 266 | Y | A | 0.6692 | |
| 267 | T | A | -0.1292 | |
| 268 | P | A | -0.1603 | |
| 269 | P | A | 0.0615 | |
| 270 | P | A | -0.2584 | |
| 271 | A | A | 0.1757 | |
| 272 | S | A | -0.1565 | |
| 273 | S | A | 0.3751 | |
| 274 | P | A | 0.5528 | |
| 275 | Y | A | 1.4120 | |
| 276 | A | A | 1.1049 | |
| 277 | V | A | 1.6723 | |
| 278 | R | A | 0.4049 | |
| 279 | P | A | -0.2813 | |
| 280 | P | A | -0.5266 | |
| 281 | T | A | -0.4949 | |
| 282 | D | A | -0.9185 | |
| 283 | Y | A | 0.8767 | |
| 284 | F | A | 0.7909 | |
| 285 | G | A | 0.3105 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.6321 | |
| 291 | L | A | 1.6370 | |
| 292 | V | A | 0.5411 | |
| 293 | S | A | -0.2205 | |
| 294 | S | A | -0.8694 | |
| 295 | D | A | -1.9103 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | -1.1160 | |
| 298 | L | A | -1.1751 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.7680 | |
| 301 | R | A | -2.0826 | |
| 302 | P | A | -1.0521 | |
| 303 | F | A | -0.1420 | |
| 304 | W | A | -0.3639 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.1789 | |
| 307 | R | A | -2.9007 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.7062 | |
| 310 | G | A | -1.3394 | |
| 311 | N | A | -1.3563 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8109 | |
| 319 | N | A | -0.8687 | |
| 320 | E | A | -1.0307 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3975 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1878 | |
| 333 | N | A | 0.4236 | |
| 334 | F | A | 1.4967 | |
| 335 | T | A | 0.8233 | |
| 336 | I | A | 0.4484 | |
| 337 | S | A | -0.8842 | |
| 338 | Q | A | -1.6222 | |
| 339 | Q | A | -1.2043 | |
| 340 | L | A | 0.3261 | |
| 341 | S | A | -0.2646 | |
| 342 | T | A | -0.8012 | |
| 343 | P | A | -1.4883 | |
| 344 | K | A | -2.4731 | |
| 345 | N | A | -2.0962 | |
| 346 | N | A | -1.2228 | |
| 347 | V | A | 0.8796 | |
| 348 | Y | A | 1.1988 | |
| 349 | D | A | -0.2669 | |
| 350 | P | A | -0.6951 | |
| 351 | A | A | -0.3073 | |
| 352 | N | A | -0.5861 | |
| 353 | F | A | -0.8200 | |
| 354 | K | A | -1.8323 | |
| 355 | N | A | -1.6261 | |
| 356 | Y | A | 0.0361 | |
| 357 | L | A | 0.8084 | |
| 358 | R | A | 0.9981 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.2059 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.2302 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0087 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6756 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2666 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.2908 | |
| 376 | L | A | -1.6917 | |
| 377 | D | A | -1.9825 | |
| 378 | P | A | -1.0381 | |
| 379 | G | A | -1.0093 | |
| 380 | V | A | -0.9215 | |
| 381 | L | A | -0.5203 | |
| 382 | A | A | -0.6423 | |
| 383 | H | A | -0.8160 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3743 | |
| 386 | T | A | -0.5545 | |
| 387 | M | A | -0.3691 | |
| 388 | N | A | -0.8626 | |
| 389 | P | A | -1.2371 | |
| 390 | T | A | -1.4731 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4715 | |
| 393 | E | A | -2.8173 | |
| 394 | N | A | -2.1744 | |
| 395 | W | A | -1.4729 | |
| 396 | N | A | -1.3090 | |
| 397 | L | A | -0.2347 | |
| 398 | G | A | 0.5711 | |
| 399 | F | A | 2.3769 | |
| 400 | V | A | 1.7714 | |
| 401 | P | A | 0.0508 | |
| 402 | P | A | -1.8901 | |
| 403 | K | A | -3.2496 | |
| 404 | E | A | -3.7954 | |
| 405 | R | A | -4.0009 | |
| 406 | E | A | -3.7982 | |
| 407 | D | A | -2.8607 | |
| 408 | P | A | -1.7571 | |
| 409 | Y | A | -0.9990 | |
| 410 | K | A | -2.1212 | |
| 411 | G | A | -0.6321 | |
| 412 | L | A | 0.6687 | |
| 413 | I | A | 1.6461 | |
| 414 | F | A | 0.7003 | |
| 415 | W | A | -0.2950 | |
| 416 | E | A | -1.6660 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9646 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0864 | |
| 421 | E | A | -2.7146 | |
| 422 | R | A | -2.2895 | |
| 423 | F | A | -1.2492 | |
| 424 | S | A | -1.5007 | |
| 425 | Q | A | -1.8677 | |
| 426 | D | A | -3.0286 | |
| 427 | L | A | 0.0000 | |
| 428 | D | A | -2.9174 | |
| 429 | Q | A | -2.6765 | |
| 430 | F | A | -1.5349 | |
| 431 | A | A | -0.9080 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6761 | |
| 435 | K | A | -0.8336 | |
| 436 | F | A | 0.1086 | |
| 437 | L | A | 0.9465 | |
| 438 | Y | A | 0.7982 | |
| 439 | Q | A | -0.3168 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine