Project name: f5263220f1e2305

Status: done

Started: 2025-02-28 09:04:02
Settings
Chain sequence(s) A: MSSSSPSLLSSRLLSPAILFTKKPASLRSISSATARHGVRVVVAAASAAAASPVSAARVRPSAAEVARTVVELAASGTLSMVGPDGWPLGVGAHFVADSAGAPALCLSAARVAAPDAPASFHVEFRQSGARTPQCTMLGALTKPSDESVLKKLSTRWQKKFGEEIDQDLLYLISVDRILHMEDFNEAGHSTYNYLVIMSGLLMDGMWVVPSDYTSAEPDPLRNFAENIVEEFNNKNAEDVRRIYNIYVESDLQVADVKMIWVDRLGFDLHAHSAEGVLAVRVPFPREVSDEKGVKSSFNMMSHHAWEVEKSYASPEFEKVQFLKKVR
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:04:27)
[INFO]       Main:     Simulation completed successfully.                                          (00:04:29)
Show buried residues

Minimal score value
-3.839
Maximal score value
3.8184
Average score
-0.611
Total score value
-199.7872

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.9071
2 S A 0.1467
3 S A -0.2992
4 S A -0.5684
5 S A -0.3883
6 P A -0.1815
7 S A 0.6773
8 L A 2.1320
9 L A 2.1611
10 S A 0.4693
11 S A -0.5749
12 R A -0.9102
13 L A 1.3128
14 L A 1.7407
15 S A 0.9898
16 P A 0.4510
17 A A 1.4071
18 I A 3.1968
19 L A 3.4519
20 F A 2.7878
21 T A 0.2434
22 K A -2.1881
23 K A -2.6889
24 P A -1.6123
25 A A -0.3848
26 S A -0.0209
27 L A 0.4749
28 R A -0.7861
29 S A 0.2210
30 I A 1.3754
31 S A 0.6312
32 S A 0.1034
33 A A -0.1141
34 T A -0.4442
35 A A -1.1493
36 R A -2.2367
37 H A -1.9475
38 G A -0.8762
39 V A 0.9415
40 R A 0.4108
41 V A 2.6693
42 V A 3.1980
43 V A 2.9365
44 A A 1.7122
45 A A 0.8069
46 A A 0.2815
47 S A -0.1051
48 A A 0.0352
49 A A 0.0446
50 A A 0.0052
51 A A 0.2896
52 S A 0.1719
53 P A 0.4788
54 V A 1.5284
55 S A 0.3210
56 A A 0.0663
57 A A -0.9175
58 R A -2.1322
59 V A -1.2988
60 R A -1.5500
61 P A -0.8786
62 S A -0.7707
63 A A -0.0214
64 A A 0.0000
65 E A 0.0000
66 V A -0.4549
67 A A 0.0000
68 R A 0.0000
69 T A 0.0000
70 V A 0.0000
71 V A 0.0000
72 E A -0.9724
73 L A -0.7699
74 A A 0.0000
75 A A -0.5347
76 S A -0.8911
77 G A -0.9188
78 T A -0.6577
79 L A 0.0000
80 S A 0.2203
81 M A 0.0000
82 V A 1.5938
83 G A 0.2736
84 P A -0.6293
85 D A -1.5328
86 G A -0.3115
87 W A 0.9575
88 P A 0.8511
89 L A 1.0914
90 G A 0.0552
91 V A 0.1612
92 G A -0.6106
93 A A 0.0000
94 H A -0.9551
95 F A 0.0000
96 V A 0.0000
97 A A 0.0000
98 D A -0.8570
99 S A -0.8028
100 A A -0.5628
101 G A 0.0000
102 A A -0.0875
103 P A 0.0000
104 A A 0.0000
105 L A 0.0000
106 C A -0.4009
107 L A -0.4287
108 S A -0.6290
109 A A -0.4785
110 A A -0.8659
111 R A -1.7306
112 V A -0.3829
113 A A -0.5051
114 A A -0.6752
115 P A -1.4610
116 D A -2.1375
117 A A -0.7773
118 P A -0.3546
119 A A 0.0000
120 S A 0.0479
121 F A 0.0000
122 H A -0.7349
123 V A 0.0000
124 E A -1.9656
125 F A -1.6028
126 R A -2.3064
127 Q A 0.0000
128 S A -1.5159
129 G A -0.9807
130 A A -0.5803
131 R A -0.8393
132 T A -1.2576
133 P A 0.0000
134 Q A 0.0000
135 C A 0.0000
136 T A -0.2777
137 M A 0.0000
138 L A -0.4277
139 G A -0.9507
140 A A -1.0302
141 L A 0.0000
142 T A -1.1643
143 K A -1.7627
144 P A 0.0000
145 S A -1.5063
146 D A -2.5328
147 E A -3.1045
148 S A -2.1412
149 V A -1.6695
150 L A -2.6907
151 K A -3.1841
152 K A -2.8840
153 L A 0.0000
154 S A -2.8046
155 T A -2.7700
156 R A -2.8147
157 W A 0.0000
158 Q A -3.3678
159 K A -3.2317
160 K A -1.9961
161 F A -1.6950
162 G A -2.3733
163 E A -3.1698
164 E A -3.4818
165 I A -2.4692
166 D A -2.9072
167 Q A -2.7762
168 D A -2.4779
169 L A -1.1737
170 L A 0.0000
171 Y A -0.2962
172 L A -0.2478
173 I A 0.0000
174 S A -0.8757
175 V A -0.8533
176 D A -1.9771
177 R A -1.3870
178 I A 0.0000
179 L A 0.7772
180 H A 0.0000
181 M A 0.0000
182 E A -1.3754
183 D A 0.0000
184 F A 0.6922
185 N A -0.5696
186 E A -1.5526
187 A A -0.5625
188 G A -1.8154
189 H A -1.8549
190 S A -0.6924
191 T A 0.0053
192 Y A 1.1708
193 N A 0.9502
194 Y A 2.6298
195 L A 3.0871
196 V A 3.1698
197 I A 3.8184
198 M A 2.8716
199 S A 1.8627
200 G A 1.6467
201 L A 2.5500
202 L A 2.4926
203 M A 1.0754
204 D A -0.9444
205 G A -0.0284
206 M A 0.9477
207 W A 1.2020
208 V A 0.0000
209 V A 0.8813
210 P A -0.5766
211 S A -0.9796
212 D A -1.6318
213 Y A 0.0000
214 T A -0.8628
215 S A -1.3621
216 A A -1.5424
217 E A -2.1762
218 P A -1.0852
219 D A 0.0000
220 P A -1.0687
221 L A 0.0000
222 R A -1.2845
223 N A -1.5658
224 F A -0.9503
225 A A 0.0000
226 E A -2.2831
227 N A -2.7314
228 I A 0.0000
229 V A 0.0000
230 E A -3.8390
231 E A -3.5192
232 F A 0.0000
233 N A -3.0427
234 N A -3.4214
235 K A -3.4181
236 N A -2.9335
237 A A -2.6646
238 E A -3.0581
239 D A -2.3326
240 V A 0.0000
241 R A -2.4936
242 R A -2.0551
243 I A 0.0000
244 Y A 0.0000
245 N A -2.4111
246 I A -1.1723
247 Y A -1.1603
248 V A 0.0000
249 E A -2.4685
250 S A -1.8586
251 D A -2.3344
252 L A -1.5890
253 Q A -1.8783
254 V A 0.0000
255 A A -0.7917
256 D A -1.5539
257 V A 0.0000
258 K A -1.6926
259 M A 0.0000
260 I A 0.0000
261 W A 0.0000
262 V A 0.0000
263 D A 0.0000
264 R A -1.4958
265 L A -1.5904
266 G A 0.0000
267 F A 0.0000
268 D A 0.0000
269 L A 0.0000
270 H A 0.0000
271 A A 0.0000
272 H A -1.0900
273 S A -1.1224
274 A A -1.0569
275 E A -2.1465
276 G A -1.7114
277 V A -1.2697
278 L A -0.8357
279 A A -0.3274
280 V A 0.0000
281 R A 0.0000
282 V A 0.0000
283 P A -0.9203
284 F A 0.0000
285 P A -1.3133
286 R A -2.8088
287 E A -3.1053
288 V A 0.0000
289 S A -1.5968
290 D A -2.2673
291 E A -2.2265
292 K A -2.6183
293 G A -2.3919
294 V A 0.0000
295 K A -1.8250
296 S A -1.2994
297 S A 0.0000
298 F A 0.0000
299 N A -1.5214
300 M A -0.3387
301 M A 0.0000
302 S A -1.1845
303 H A -1.3250
304 H A -1.0179
305 A A 0.0000
306 W A -0.8481
307 E A -1.1269
308 V A -1.3167
309 E A -2.4507
310 K A -1.8057
311 S A -0.7978
312 Y A 0.3782
313 A A -0.4020
314 S A -0.9114
315 P A -1.6248
316 E A -2.2054
317 F A -1.5967
318 E A -2.6679
319 K A -2.2812
320 V A -0.8641
321 Q A -1.0628
322 F A 1.0070
323 L A 0.2707
324 K A -1.0930
325 K A -2.5032
326 V A 0.0000
327 R A -2.4766
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Laboratory of Theory of Biopolymers 2018