| Chain sequence(s) |
A: PPGNYRLVVFELENFQGRRAEFSGECSNLADRGFDRVRSIIVSAGPWVAFEQSNFRGEMFILEKGEYPRWNTWSSSYRSDRLMSFRPIKMDAQEHKISLFEGANFKGNTIEIQGDDAPSLWVYGFSDRVGSVKVSSGTWVGYQYPGYRGYQYLLEPGDFRHWNEWGAFQPQMQSLRRLRDKQW
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:08)
[INFO] Main: Simulation completed successfully. (00:02:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 54 | P | A | -0.3015 | |
| 55 | P | A | -0.3865 | |
| 56 | G | A | -0.7473 | |
| 57 | N | A | -1.3589 | |
| 58 | Y | A | 0.0000 | |
| 59 | R | A | -0.7574 | |
| 60 | L | A | 0.0000 | |
| 61 | V | A | 0.0000 | |
| 62 | V | A | 0.0000 | |
| 63 | F | A | 0.0000 | |
| 64 | E | A | -0.3204 | |
| 65 | L | A | 0.2302 | |
| 66 | E | A | -1.6036 | |
| 67 | N | A | -1.4920 | |
| 68 | F | A | -0.1703 | |
| 69 | Q | A | -1.1697 | |
| 70 | G | A | -0.6353 | |
| 71 | R | A | -1.9013 | |
| 72 | R | A | -2.1259 | |
| 73 | A | A | -0.6673 | |
| 74 | E | A | -1.7732 | |
| 75 | F | A | -0.1360 | |
| 76 | S | A | -0.2820 | |
| 77 | G | A | -0.5289 | |
| 78 | E | A | -1.9137 | |
| 79 | C | A | 0.0000 | |
| 80 | S | A | -0.2654 | |
| 81 | N | A | -0.2868 | |
| 82 | L | A | 0.0000 | |
| 83 | A | A | -0.4850 | |
| 84 | D | A | -2.0995 | |
| 85 | R | A | -2.1248 | |
| 86 | G | A | -0.5493 | |
| 87 | F | A | 0.0000 | |
| 88 | D | A | -1.8374 | |
| 89 | R | A | -0.6167 | |
| 90 | V | A | 0.0000 | |
| 91 | R | A | -0.6310 | |
| 92 | S | A | 0.0000 | |
| 93 | I | A | 0.0000 | |
| 94 | I | A | 0.2046 | |
| 95 | V | A | 0.0000 | |
| 96 | S | A | -0.0581 | |
| 97 | A | A | -0.0998 | |
| 98 | G | A | -0.1001 | |
| 99 | P | A | 0.0000 | |
| 100 | W | A | 0.0000 | |
| 101 | V | A | 0.0000 | |
| 102 | A | A | 0.0000 | |
| 103 | F | A | 0.0000 | |
| 104 | E | A | -0.4288 | |
| 105 | Q | A | -0.7290 | |
| 106 | S | A | -0.3950 | |
| 107 | N | A | -1.1608 | |
| 108 | F | A | 0.0921 | |
| 109 | R | A | -1.7588 | |
| 110 | G | A | -0.5436 | |
| 111 | E | A | 0.0000 | |
| 112 | M | A | 0.0000 | |
| 113 | F | A | 0.0000 | |
| 114 | I | A | 0.0000 | |
| 115 | L | A | 0.0000 | |
| 116 | E | A | -0.9551 | |
| 117 | K | A | -1.8502 | |
| 118 | G | A | -0.8248 | |
| 119 | E | A | -1.7732 | |
| 120 | Y | A | -0.1799 | |
| 121 | P | A | -0.4785 | |
| 122 | R | A | -1.4594 | |
| 123 | W | A | -0.0673 | |
| 124 | N | A | -0.2403 | |
| 125 | T | A | -0.0806 | |
| 126 | W | A | 0.0000 | |
| 127 | S | A | 0.0000 | |
| 128 | S | A | -0.0475 | |
| 129 | S | A | 0.1997 | |
| 130 | Y | A | 0.9708 | |
| 131 | R | A | -1.6074 | |
| 132 | S | A | -0.4691 | |
| 133 | D | A | -0.8259 | |
| 134 | R | A | -1.5097 | |
| 135 | L | A | 0.0000 | |
| 136 | M | A | 0.0847 | |
| 137 | S | A | 0.0000 | |
| 138 | F | A | 0.0000 | |
| 139 | R | A | -0.7049 | |
| 140 | P | A | -0.1027 | |
| 141 | I | A | 0.0000 | |
| 142 | K | A | -1.6795 | |
| 143 | M | A | -0.3329 | |
| 144 | D | A | -0.6878 | |
| 145 | A | A | -0.2906 | |
| 146 | Q | A | -1.5292 | |
| 147 | E | A | -2.0448 | |
| 148 | H | A | 0.0000 | |
| 149 | K | A | -0.8613 | |
| 150 | I | A | 0.0000 | |
| 151 | S | A | -0.2252 | |
| 152 | L | A | 0.0000 | |
| 153 | F | A | 0.1202 | |
| 154 | E | A | -0.3402 | |
| 155 | G | A | -0.3370 | |
| 156 | A | A | -0.1437 | |
| 157 | N | A | -0.9169 | |
| 158 | F | A | 0.0174 | |
| 159 | K | A | -1.7100 | |
| 160 | G | A | -1.0173 | |
| 161 | N | A | -1.3714 | |
| 162 | T | A | -0.2303 | |
| 163 | I | A | -0.0285 | |
| 164 | E | A | -1.3338 | |
| 165 | I | A | 0.0000 | |
| 166 | Q | A | -1.3861 | |
| 167 | G | A | -1.0150 | |
| 168 | D | A | -1.8908 | |
| 169 | D | A | -0.7337 | |
| 170 | A | A | 0.0000 | |
| 171 | P | A | -0.2116 | |
| 172 | S | A | -0.0960 | |
| 173 | L | A | 0.0000 | |
| 174 | W | A | 1.1300 | |
| 175 | V | A | 2.0247 | |
| 176 | Y | A | 0.8123 | |
| 177 | G | A | -0.3601 | |
| 178 | F | A | 0.0000 | |
| 179 | S | A | -0.1589 | |
| 180 | D | A | -0.7076 | |
| 181 | R | A | -1.0669 | |
| 182 | V | A | 0.0000 | |
| 183 | G | A | 0.0000 | |
| 184 | S | A | 0.0000 | |
| 185 | V | A | 0.0000 | |
| 186 | K | A | -1.3017 | |
| 187 | V | A | 0.0000 | |
| 188 | S | A | -0.1840 | |
| 189 | S | A | -0.1481 | |
| 190 | G | A | 0.0000 | |
| 191 | T | A | -0.0842 | |
| 192 | W | A | 0.0000 | |
| 193 | V | A | 0.0000 | |
| 194 | G | A | 0.0000 | |
| 195 | Y | A | 0.0000 | |
| 196 | Q | A | -0.0188 | |
| 197 | Y | A | 0.5157 | |
| 198 | P | A | 0.0263 | |
| 199 | G | A | -0.1307 | |
| 200 | Y | A | -0.0230 | |
| 201 | R | A | -1.7058 | |
| 202 | G | A | 0.0000 | |
| 203 | Y | A | 0.0000 | |
| 204 | Q | A | 0.0000 | |
| 205 | Y | A | 0.0000 | |
| 206 | L | A | 0.0000 | |
| 207 | L | A | 0.0000 | |
| 208 | E | A | -0.6296 | |
| 209 | P | A | -0.3662 | |
| 210 | G | A | -0.5581 | |
| 211 | D | A | -1.9148 | |
| 212 | F | A | -0.3749 | |
| 213 | R | A | -1.9358 | |
| 214 | H | A | -0.5783 | |
| 215 | W | A | -0.1410 | |
| 216 | N | A | -1.6030 | |
| 217 | E | A | -2.0513 | |
| 218 | W | A | 0.0000 | |
| 219 | G | A | -0.3768 | |
| 220 | A | A | 0.0000 | |
| 221 | F | A | 1.7193 | |
| 222 | Q | A | -0.8436 | |
| 223 | P | A | -0.2968 | |
| 224 | Q | A | -0.3958 | |
| 225 | M | A | 0.0000 | |
| 226 | Q | A | 0.0000 | |
| 227 | S | A | 0.0000 | |
| 228 | L | A | 0.0000 | |
| 229 | R | A | -0.3922 | |
| 230 | R | A | -0.2849 | |
| 231 | L | A | 0.0000 | |
| 232 | R | A | -1.9316 | |
| 233 | D | A | -1.1297 | |
| 234 | K | A | -2.0065 | |
| 235 | Q | A | -1.2896 | |
| 236 | W | A | 0.9661 |