Project name: query_structure

Status: done

Started: 2026-03-16 22:57:00
Settings
Chain sequence(s) A: CAESCVYIPCTVTALLGCSCSNRVCYNGIP
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:05)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:05)
Show buried residues

Minimal score value
-1.7439
Maximal score value
2.7004
Average score
0.7428
Total score value
22.2854

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 C A 0.9439
2 A A 0.5316
3 E A 0.4006
4 S A 0.3162
5 C A 0.0000
6 V A 1.1760
7 Y A 2.3926
8 I A 2.6162
9 P A 1.2501
10 C A 1.4609
11 T A 1.5003
12 V A 2.4439
13 T A 0.0000
14 A A 1.7337
15 L A 2.7004
16 L A 2.3883
17 G A 0.9282
18 C A 0.0000
19 S A -0.1264
20 C A 0.2143
21 S A -0.7898
22 N A -1.7439
23 R A -1.2690
24 V A -0.1238
25 C A 0.0000
26 Y A 0.6748
27 N A 0.0952
28 G A 0.1837
29 I A 1.6123
30 P A 0.7751
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Laboratory of Theory of Biopolymers 2018