| Chain sequence(s) |
A: CAESCVYIPCTVTALLGCSCSNRVCYNGIP
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:05)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 0.9439 | |
| 2 | A | A | 0.5316 | |
| 3 | E | A | 0.4006 | |
| 4 | S | A | 0.3162 | |
| 5 | C | A | 0.0000 | |
| 6 | V | A | 1.1760 | |
| 7 | Y | A | 2.3926 | |
| 8 | I | A | 2.6162 | |
| 9 | P | A | 1.2501 | |
| 10 | C | A | 1.4609 | |
| 11 | T | A | 1.5003 | |
| 12 | V | A | 2.4439 | |
| 13 | T | A | 0.0000 | |
| 14 | A | A | 1.7337 | |
| 15 | L | A | 2.7004 | |
| 16 | L | A | 2.3883 | |
| 17 | G | A | 0.9282 | |
| 18 | C | A | 0.0000 | |
| 19 | S | A | -0.1264 | |
| 20 | C | A | 0.2143 | |
| 21 | S | A | -0.7898 | |
| 22 | N | A | -1.7439 | |
| 23 | R | A | -1.2690 | |
| 24 | V | A | -0.1238 | |
| 25 | C | A | 0.0000 | |
| 26 | Y | A | 0.6748 | |
| 27 | N | A | 0.0952 | |
| 28 | G | A | 0.1837 | |
| 29 | I | A | 1.6123 | |
| 30 | P | A | 0.7751 |