| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVLVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTEPQHEGPDDRVNFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRSGPMGHPLPSSPPPSPLYVPPPPSSPYAVPPSYDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPAVNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9426 | |
| 2 | L | A | 1.9652 | |
| 3 | P | A | 0.6504 | |
| 4 | P | A | 0.3797 | |
| 5 | T | A | 0.1274 | |
| 6 | T | A | 0.1350 | |
| 7 | P | A | 0.1825 | |
| 8 | V | A | 1.2137 | |
| 9 | A | A | 0.0273 | |
| 10 | K | A | -1.1600 | |
| 11 | V | A | -0.4144 | |
| 12 | Q | A | -1.5441 | |
| 13 | S | A | -1.6083 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4153 | |
| 16 | E | A | -2.4402 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4607 | |
| 20 | P | A | 0.1297 | |
| 21 | T | A | 0.1638 | |
| 22 | S | A | -0.0970 | |
| 23 | L | A | 0.1026 | |
| 24 | F | A | -0.0283 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1798 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7974 | |
| 31 | R | A | -2.6404 | |
| 32 | L | A | -0.7650 | |
| 33 | L | A | 1.2114 | |
| 34 | T | A | 1.4437 | |
| 35 | V | A | 1.9591 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2441 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6160 | |
| 40 | K | A | -1.8259 | |
| 41 | D | A | -0.9877 | |
| 42 | I | A | 0.6579 | |
| 43 | V | A | 0.8239 | |
| 44 | K | A | -1.3397 | |
| 45 | N | A | -1.9908 | |
| 46 | G | A | -1.3013 | |
| 47 | K | A | -1.0603 | |
| 48 | V | A | 1.5100 | |
| 49 | L | A | 1.8112 | |
| 50 | V | A | 1.1301 | |
| 51 | P | A | 0.3994 | |
| 52 | K | A | -0.6518 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1316 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4597 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2600 | |
| 70 | K | A | -1.8058 | |
| 71 | F | A | -0.6633 | |
| 72 | A | A | -0.5889 | |
| 73 | L | A | -0.8640 | |
| 74 | P | A | -1.2549 | |
| 75 | Q | A | -2.4815 | |
| 76 | K | A | -3.0988 | |
| 77 | D | A | -2.9882 | |
| 78 | F | A | -1.6392 | |
| 79 | Y | A | -1.9150 | |
| 80 | D | A | -2.7582 | |
| 81 | P | A | -2.3522 | |
| 82 | E | A | -3.0730 | |
| 83 | K | A | -3.4425 | |
| 84 | E | A | -2.5007 | |
| 85 | R | A | -1.3131 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6671 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9645 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3211 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7446 | |
| 99 | G | A | -0.5440 | |
| 100 | P | A | -0.4336 | |
| 101 | L | A | -0.0111 | |
| 102 | G | A | -0.2672 | |
| 103 | K | A | -0.7167 | |
| 104 | G | A | -0.5296 | |
| 105 | T | A | -0.4746 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -0.1094 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.1841 | |
| 110 | L | A | -0.1311 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.3516 | |
| 113 | K | A | -0.7296 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.7863 | |
| 117 | T | A | -1.3505 | |
| 118 | E | A | -2.5170 | |
| 119 | N | A | -2.6230 | |
| 120 | P | A | -2.3242 | |
| 121 | T | A | -1.8564 | |
| 122 | E | A | -2.6620 | |
| 123 | P | A | -1.9632 | |
| 124 | Q | A | -2.6561 | |
| 125 | H | A | -2.7132 | |
| 126 | E | A | -3.1354 | |
| 127 | G | A | -2.4237 | |
| 128 | P | A | -1.8430 | |
| 129 | D | A | -2.6194 | |
| 130 | D | A | -2.2928 | |
| 131 | R | A | -1.4780 | |
| 132 | V | A | -0.4841 | |
| 133 | N | A | -0.9089 | |
| 134 | F | A | -0.3950 | |
| 135 | S | A | -0.3716 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.5711 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2099 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5677 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2300 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.0939 | |
| 157 | D | A | 0.3330 | |
| 158 | I | A | 0.8376 | |
| 159 | A | A | 0.1179 | |
| 160 | E | A | -1.4772 | |
| 161 | P | A | -0.2391 | |
| 162 | C | A | 0.1793 | |
| 163 | P | A | -0.1698 | |
| 164 | G | A | -0.0711 | |
| 165 | L | A | 0.6078 | |
| 166 | P | A | -0.1031 | |
| 167 | P | A | -0.3361 | |
| 168 | G | A | -0.4152 | |
| 169 | A | A | -0.0173 | |
| 170 | C | A | 0.7500 | |
| 171 | P | A | 0.5455 | |
| 172 | P | A | 0.6877 | |
| 173 | I | A | 2.0300 | |
| 174 | Q | A | 0.8341 | |
| 175 | L | A | 1.4352 | |
| 176 | V | A | 0.8192 | |
| 177 | N | A | -0.2918 | |
| 178 | S | A | 0.0340 | |
| 179 | V | A | 0.4427 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3825 | |
| 182 | D | A | 0.0864 | |
| 183 | G | A | -0.1598 | |
| 184 | D | A | -0.5699 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1332 | |
| 190 | F | A | 0.0596 | |
| 191 | G | A | -0.1074 | |
| 192 | N | A | -0.2928 | |
| 193 | M | A | -0.1720 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4307 | |
| 197 | E | A | -2.6422 | |
| 198 | L | A | -1.2364 | |
| 199 | Q | A | -2.5496 | |
| 200 | Q | A | -3.3547 | |
| 201 | D | A | -3.6079 | |
| 202 | R | A | -3.3493 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1818 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.4110 | |
| 211 | S | A | -1.9286 | |
| 212 | T | A | -1.5039 | |
| 213 | R | A | -2.2049 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1752 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3173 | |
| 220 | L | A | 0.5402 | |
| 221 | K | A | -1.2277 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9409 | |
| 224 | N | A | -1.5503 | |
| 225 | E | A | -1.3038 | |
| 226 | A | A | -0.6678 | |
| 227 | Y | A | -0.4446 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7042 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1390 | |
| 234 | F | A | 0.0284 | |
| 235 | G | A | -0.9391 | |
| 236 | R | A | -2.6989 | |
| 237 | R | A | -3.0001 | |
| 238 | E | A | -2.1528 | |
| 239 | Q | A | -0.1786 | |
| 240 | V | A | 1.4782 | |
| 241 | Y | A | 1.2011 | |
| 242 | A | A | 0.1098 | |
| 243 | R | A | -1.2526 | |
| 244 | H | A | -1.2440 | |
| 245 | F | A | -0.2785 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | -0.2483 | |
| 248 | R | A | -0.6103 | |
| 249 | S | A | -1.4233 | |
| 250 | G | A | -1.0755 | |
| 251 | P | A | -0.8300 | |
| 252 | M | A | -0.7175 | |
| 253 | G | A | -0.9905 | |
| 254 | H | A | -1.0959 | |
| 255 | P | A | -0.6601 | |
| 256 | L | A | 0.4345 | |
| 257 | P | A | -0.0306 | |
| 258 | S | A | -0.2132 | |
| 259 | S | A | -0.3585 | |
| 260 | P | A | -0.4268 | |
| 261 | P | A | -0.1104 | |
| 262 | P | A | 0.0631 | |
| 263 | S | A | 0.5594 | |
| 264 | P | A | 0.7247 | |
| 265 | L | A | 1.9010 | |
| 266 | Y | A | 1.8276 | |
| 267 | V | A | 1.9560 | |
| 268 | P | A | 1.0339 | |
| 269 | P | A | 0.5451 | |
| 270 | P | A | -0.2029 | |
| 271 | P | A | -0.1632 | |
| 272 | S | A | -0.3390 | |
| 273 | S | A | 0.1678 | |
| 274 | P | A | 0.1572 | |
| 275 | Y | A | 1.2758 | |
| 276 | A | A | 1.0221 | |
| 277 | V | A | 2.0005 | |
| 278 | P | A | 1.0955 | |
| 279 | P | A | -0.1968 | |
| 280 | S | A | 0.0000 | |
| 281 | Y | A | -0.0025 | |
| 282 | D | A | -0.4350 | |
| 283 | Y | A | 0.9239 | |
| 284 | F | A | 0.7140 | |
| 285 | G | A | 0.0722 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8996 | |
| 291 | L | A | 1.6222 | |
| 292 | V | A | 0.6396 | |
| 293 | S | A | -0.1511 | |
| 294 | S | A | -0.9697 | |
| 295 | D | A | -1.8386 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1493 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6335 | |
| 301 | R | A | -1.8599 | |
| 302 | P | A | -0.9529 | |
| 303 | F | A | -0.1824 | |
| 304 | W | A | -0.5234 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0860 | |
| 307 | R | A | -2.9236 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.6507 | |
| 310 | G | A | -1.4145 | |
| 311 | N | A | -1.3890 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9362 | |
| 319 | N | A | -0.8929 | |
| 320 | E | A | -1.0580 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3680 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1775 | |
| 333 | N | A | 0.3976 | |
| 334 | F | A | 1.4566 | |
| 335 | T | A | 0.7305 | |
| 336 | I | A | 0.3825 | |
| 337 | S | A | -0.8763 | |
| 338 | Q | A | -1.5173 | |
| 339 | Q | A | -0.7938 | |
| 340 | L | A | 0.8592 | |
| 341 | C | A | 0.5720 | |
| 342 | T | A | 0.2954 | |
| 343 | P | A | -0.0867 | |
| 344 | A | A | 0.4217 | |
| 345 | V | A | 0.8410 | |
| 346 | N | A | 0.0617 | |
| 347 | V | A | 1.7868 | |
| 348 | Y | A | 1.6237 | |
| 349 | D | A | 0.1778 | |
| 350 | P | A | -0.3399 | |
| 351 | S | A | -0.2740 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.5733 | |
| 354 | K | A | -1.6567 | |
| 355 | N | A | -1.6971 | |
| 356 | Y | A | -0.1191 | |
| 357 | L | A | 0.5569 | |
| 358 | R | A | 0.8907 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4542 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0188 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9416 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6855 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2724 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3215 | |
| 376 | L | A | -1.7534 | |
| 377 | D | A | -2.0441 | |
| 378 | P | A | -1.0692 | |
| 379 | G | A | -1.0277 | |
| 380 | V | A | -0.9366 | |
| 381 | L | A | -0.5436 | |
| 382 | A | A | -0.6644 | |
| 383 | H | A | -0.8567 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4076 | |
| 386 | T | A | -0.5807 | |
| 387 | M | A | -0.3353 | |
| 388 | N | A | -0.8786 | |
| 389 | P | A | -1.2809 | |
| 390 | T | A | -1.5734 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5566 | |
| 393 | E | A | -2.9744 | |
| 394 | N | A | -2.7379 | |
| 395 | W | A | -1.5694 | |
| 396 | N | A | -1.4306 | |
| 397 | L | A | -0.2496 | |
| 398 | G | A | 0.5098 | |
| 399 | F | A | 2.4119 | |
| 400 | V | A | 1.8269 | |
| 401 | P | A | 0.0441 | |
| 402 | P | A | -1.9641 | |
| 403 | K | A | -3.5694 | |
| 404 | E | A | -3.9419 | |
| 405 | R | A | -4.3108 | |
| 406 | E | A | -3.9345 | |
| 407 | D | A | -2.9128 | |
| 408 | P | A | -1.7872 | |
| 409 | Y | A | -0.9747 | |
| 410 | K | A | -2.0898 | |
| 411 | G | A | -0.6354 | |
| 412 | L | A | 0.6710 | |
| 413 | I | A | 1.5833 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4011 | |
| 416 | E | A | -1.6733 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8452 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8780 | |
| 421 | E | A | -2.4867 | |
| 422 | R | A | -2.0453 | |
| 423 | F | A | -1.0011 | |
| 424 | S | A | -1.2956 | |
| 425 | Q | A | -1.7817 | |
| 426 | D | A | -2.8719 | |
| 427 | L | A | -1.9810 | |
| 428 | D | A | -2.7783 | |
| 429 | Q | A | -2.6066 | |
| 430 | F | A | -1.4413 | |
| 431 | A | A | -0.8931 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5543 | |
| 435 | K | A | -0.7088 | |
| 436 | F | A | 0.1596 | |
| 437 | L | A | 1.0423 | |
| 438 | Y | A | 0.8355 | |
| 439 | Q | A | -0.2616 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine