| Chain sequence(s) |
A: EVKLEESGGGLVQQPGGSMKLSCVASGFIFSNHWMNWVRQSPEKGLEWVAEIRSKSINSATHYAESVKGRFTISRDDSKSAVYLQMTDLRTEDTGVYYCSRNYYGSTYDYWGQGTTLTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:36)
[INFO] Main: Simulation completed successfully. (00:01:37)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -1.7479 | |
| 2 | V | A | -0.3238 | |
| 3 | K | A | -1.6282 | |
| 4 | L | A | 0.0000 | |
| 5 | E | A | -1.8541 | |
| 6 | E | A | -0.5600 | |
| 7 | S | A | -0.2827 | |
| 8 | G | A | -0.2316 | |
| 9 | G | A | 0.0000 | |
| 10 | G | A | 0.0030 | |
| 11 | L | A | 0.2565 | |
| 12 | V | A | 0.0000 | |
| 13 | Q | A | -1.2274 | |
| 14 | P | A | -0.4642 | |
| 15 | G | A | -0.7796 | |
| 16 | G | A | -0.1598 | |
| 17 | S | A | -0.1431 | |
| 18 | M | A | -0.1796 | |
| 19 | K | A | -1.5518 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.0184 | |
| 22 | C | A | 0.0000 | |
| 23 | V | A | 0.8460 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -0.2809 | |
| 26 | G | A | -0.3906 | |
| 27 | F | A | 0.5832 | |
| 28 | I | A | 2.0675 | |
| 29 | F | A | 0.0000 | |
| 30 | S | A | -0.3508 | |
| 31 | N | A | -1.3133 | |
| 32 | H | A | -0.3096 | |
| 33 | W | A | 0.0505 | |
| 34 | M | A | 0.0000 | |
| 35 | N | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | V | A | 0.0000 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -0.4492 | |
| 40 | S | A | -0.1878 | |
| 41 | P | A | -0.5921 | |
| 42 | E | A | -2.1788 | |
| 43 | K | A | -2.0686 | |
| 44 | G | A | -0.2140 | |
| 45 | L | A | 1.3843 | |
| 46 | E | A | 0.0990 | |
| 47 | W | A | 0.3182 | |
| 48 | V | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | E | A | 0.0000 | |
| 51 | I | A | 0.0000 | |
| 52 | R | A | -0.4317 | |
| 53 | S | A | 0.0000 | |
| 54 | K | A | -1.8778 | |
| 55 | S | A | -0.2520 | |
| 56 | I | A | 1.2252 | |
| 57 | N | A | -1.1861 | |
| 58 | S | A | -0.5696 | |
| 59 | A | A | -0.0004 | |
| 60 | T | A | -0.1024 | |
| 61 | H | A | -0.3769 | |
| 62 | Y | A | 0.1237 | |
| 63 | A | A | 0.0000 | |
| 64 | E | A | -1.8363 | |
| 65 | S | A | -0.4246 | |
| 66 | V | A | 0.0000 | |
| 67 | K | A | -1.7863 | |
| 68 | G | A | -0.7810 | |
| 69 | R | A | 0.0000 | |
| 70 | F | A | 0.0000 | |
| 71 | T | A | -0.0626 | |
| 72 | I | A | 0.0000 | |
| 73 | S | A | -0.1570 | |
| 74 | R | A | -0.3324 | |
| 75 | D | A | -0.6716 | |
| 76 | D | A | -0.4420 | |
| 77 | S | A | -0.5768 | |
| 78 | K | A | -1.7481 | |
| 79 | S | A | -0.3901 | |
| 80 | A | A | 0.0000 | |
| 81 | V | A | 0.0000 | |
| 82 | Y | A | 0.3337 | |
| 83 | L | A | 0.0000 | |
| 84 | Q | A | -0.5768 | |
| 85 | M | A | 0.0000 | |
| 86 | T | A | -0.3791 | |
| 87 | D | A | -1.8665 | |
| 88 | L | A | 0.0000 | |
| 89 | R | A | -1.0914 | |
| 90 | T | A | -0.6043 | |
| 91 | E | A | -1.8329 | |
| 92 | D | A | 0.0000 | |
| 93 | T | A | -0.0282 | |
| 94 | G | A | 0.0000 | |
| 95 | V | A | 0.4775 | |
| 96 | Y | A | 0.0000 | |
| 97 | Y | A | 0.1948 | |
| 98 | C | A | 0.0000 | |
| 99 | S | A | 0.0000 | |
| 100 | R | A | 0.0000 | |
| 101 | N | A | 0.0000 | |
| 102 | Y | A | 1.0910 | |
| 103 | Y | A | 0.7421 | |
| 104 | G | A | -0.3856 | |
| 105 | S | A | -0.3097 | |
| 106 | T | A | -0.0218 | |
| 107 | Y | A | 0.2560 | |
| 108 | D | A | -0.4769 | |
| 109 | Y | A | 0.5560 | |
| 110 | W | A | 0.6043 | |
| 111 | G | A | -0.1846 | |
| 112 | Q | A | -1.2288 | |
| 113 | G | A | -0.2997 | |
| 114 | T | A | -0.0301 | |
| 115 | T | A | 0.0511 | |
| 116 | L | A | 0.0000 | |
| 117 | T | A | 0.0185 | |
| 118 | V | A | 0.0000 | |
| 119 | S | A | -0.0781 | |
| 120 | S | A | -0.2123 | |
| 121 | A | A | -0.0359 | |
| 122 | S | A | -0.2133 | |
| 123 | T | A | -0.2489 | |
| 124 | K | A | -0.9193 | |
| 125 | G | A | -0.2741 | |
| 126 | P | A | 0.0000 | |
| 127 | S | A | -0.1021 | |
| 128 | V | A | 0.0000 | |
| 129 | F | A | 1.2326 | |
| 130 | P | A | 0.1612 | |
| 131 | L | A | 0.5829 | |
| 132 | A | A | 0.1305 | |
| 133 | P | A | 0.0000 | |
| 134 | S | A | -0.0660 | |
| 135 | S | A | -0.5326 | |
| 136 | K | A | -1.7522 | |
| 137 | S | A | -0.3851 | |
| 138 | T | A | -0.0987 | |
| 139 | S | A | -0.3033 | |
| 140 | G | A | -0.5930 | |
| 141 | G | A | -0.5606 | |
| 142 | T | A | -0.1491 | |
| 143 | A | A | 0.0000 | |
| 144 | A | A | 0.0106 | |
| 145 | L | A | 0.0000 | |
| 146 | G | A | 0.0000 | |
| 147 | C | A | 0.0000 | |
| 148 | L | A | 0.4882 | |
| 149 | V | A | 0.0000 | |
| 150 | K | A | -0.6183 | |
| 151 | D | A | -0.4396 | |
| 152 | Y | A | 0.0000 | |
| 153 | F | A | 0.0000 | |
| 154 | P | A | 0.0000 | |
| 155 | E | A | -0.5423 | |
| 156 | P | A | -0.2737 | |
| 157 | V | A | 0.1398 | |
| 158 | T | A | 0.0030 | |
| 159 | V | A | 0.1877 | |
| 160 | S | A | -0.0305 | |
| 161 | W | A | 0.0000 | |
| 162 | N | A | -0.2935 | |
| 163 | S | A | -0.3460 | |
| 164 | G | A | -0.4950 | |
| 165 | A | A | 0.0236 | |
| 166 | L | A | 0.2808 | |
| 167 | T | A | -0.0580 | |
| 168 | S | A | -0.2897 | |
| 169 | G | A | -0.2909 | |
| 170 | V | A | 0.2972 | |
| 171 | H | A | -0.7123 | |
| 172 | T | A | 0.0015 | |
| 173 | F | A | 0.9278 | |
| 174 | P | A | -0.0722 | |
| 175 | A | A | 0.2925 | |
| 176 | V | A | 2.0593 | |
| 177 | L | A | 1.8535 | |
| 178 | Q | A | -0.0126 | |
| 179 | S | A | -0.2992 | |
| 180 | S | A | -0.3012 | |
| 181 | G | A | -0.2616 | |
| 182 | L | A | 0.1966 | |
| 183 | Y | A | 0.4540 | |
| 184 | S | A | 0.0000 | |
| 185 | L | A | 0.0000 | |
| 186 | S | A | 0.0007 | |
| 187 | S | A | 0.0000 | |
| 188 | V | A | 0.3812 | |
| 189 | V | A | 0.0000 | |
| 190 | T | A | -0.0439 | |
| 191 | V | A | 0.0000 | |
| 192 | P | A | -0.2698 | |
| 193 | S | A | -0.1454 | |
| 194 | S | A | -0.2281 | |
| 195 | S | A | -0.0160 | |
| 196 | L | A | 0.1709 | |
| 197 | G | A | -0.4308 | |
| 198 | T | A | -0.3235 | |
| 199 | Q | A | -0.9432 | |
| 200 | T | A | -0.2078 | |
| 201 | Y | A | 0.0000 | |
| 202 | I | A | 0.2769 | |
| 203 | C | A | 0.0000 | |
| 204 | N | A | -0.3684 | |
| 205 | V | A | 0.0000 | |
| 206 | N | A | -0.6262 | |
| 207 | H | A | 0.0000 | |
| 208 | K | A | -1.7997 | |
| 209 | P | A | -0.3515 | |
| 210 | S | A | -0.3036 | |
| 211 | N | A | -1.4833 | |
| 212 | T | A | -0.5592 | |
| 213 | K | A | -1.6838 | |
| 214 | V | A | -0.2536 | |
| 215 | D | A | -1.8392 | |
| 216 | K | A | -1.1744 | |
| 217 | K | A | -1.5651 | |
| 218 | V | A | 0.0000 | |
| 219 | E | A | -1.8331 | |
| 220 | P | A | -0.7182 | |
| 221 | K | A | -1.7133 |