| Chain sequence(s) |
A: GAPALNPEPELRSTDDYVTPTDLFYIAETDLLTETGDPTKDTVVDGKVVTPKVSAYQFKVFLLKLPDPNKLPLPSPDFVNPATERLIWRLRAFKIGRYGPLGTGSYGHPNFNALGDVDNPTEPLHGGEDDTQALSFTPKLKQEFIIGDRPPLGKYTAKAAPAPGLPPGAPPPTETVTTIIEHGDMADIGFGAKNYKELEPEKDEVPDIIRDTTTKVFDYDGMKADPYGDRMFTYDKYEKSSDSKKYVRDGPQLFPLPAAPPPSPLYVPPPPSSPYAVLPPYDYFTLPDRGEITEKDLLFNKPFFLSKTPGKNNGILWHNRLYITVLDNTRATITTNTTQTATPAPNVYDPAYYTTSKTYSEQYQLSLIVQLCKIPLTPDVLEELRRRDPSILVNWNLPFIPPVVRPDPLAGKKFIEIDLTDKLSTDLSKFPLGQEFLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.5018 | |
| 2 | A | A | -0.0346 | |
| 3 | P | A | -0.1028 | |
| 4 | A | A | 0.2051 | |
| 5 | L | A | 0.5220 | |
| 6 | N | A | -1.2014 | |
| 7 | P | A | -1.6652 | |
| 8 | E | A | -2.5956 | |
| 9 | P | A | -2.2938 | |
| 10 | E | A | -2.5507 | |
| 11 | L | A | -1.4928 | |
| 12 | R | A | -1.9280 | |
| 13 | S | A | -1.8548 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.6377 | |
| 16 | D | A | -2.6911 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | T | A | -0.8299 | |
| 20 | P | A | -0.8385 | |
| 21 | T | A | -0.8298 | |
| 22 | D | A | -1.5447 | |
| 23 | L | A | -0.3298 | |
| 24 | F | A | 0.1119 | |
| 25 | Y | A | 0.1106 | |
| 26 | I | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -1.1914 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.3031 | |
| 31 | L | A | 0.3305 | |
| 32 | L | A | 0.2105 | |
| 33 | T | A | -0.1709 | |
| 34 | E | A | -0.5758 | |
| 35 | T | A | -0.4941 | |
| 36 | G | A | 0.0000 | |
| 37 | D | A | -1.2266 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -1.4716 | |
| 40 | K | A | -2.0433 | |
| 41 | D | A | -0.8493 | |
| 42 | T | A | 0.8093 | |
| 43 | V | A | 2.0221 | |
| 44 | V | A | 1.5839 | |
| 45 | D | A | -0.9082 | |
| 46 | G | A | -0.5673 | |
| 47 | K | A | -0.2155 | |
| 48 | V | A | 1.8578 | |
| 49 | V | A | 2.4765 | |
| 50 | T | A | 0.9274 | |
| 51 | P | A | -0.1011 | |
| 52 | K | A | -1.1403 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | F | A | 0.0000 | |
| 59 | K | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | L | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.0600 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4241 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.5762 | |
| 70 | K | A | -1.9848 | |
| 71 | L | A | -0.8177 | |
| 72 | P | A | -0.3755 | |
| 73 | L | A | -0.1159 | |
| 74 | P | A | -0.2060 | |
| 75 | S | A | -0.6454 | |
| 76 | P | A | -1.1572 | |
| 77 | D | A | -2.0343 | |
| 78 | F | A | -0.9755 | |
| 79 | V | A | 0.0000 | |
| 80 | N | A | -1.8147 | |
| 81 | P | A | -1.2302 | |
| 82 | A | A | -0.6188 | |
| 83 | T | A | -0.6892 | |
| 84 | E | A | -1.1048 | |
| 85 | R | A | -0.8792 | |
| 86 | L | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.2378 | |
| 92 | A | A | 0.0000 | |
| 93 | F | A | 0.0000 | |
| 94 | K | A | -0.7514 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | 0.0000 | |
| 97 | R | A | 0.0000 | |
| 98 | Y | A | 0.3209 | |
| 99 | G | A | -0.2611 | |
| 100 | P | A | -0.2990 | |
| 101 | L | A | 0.0770 | |
| 102 | G | A | 0.1058 | |
| 103 | T | A | -0.1811 | |
| 104 | G | A | 0.0000 | |
| 105 | S | A | -0.2175 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -0.6025 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -1.0610 | |
| 110 | N | A | -2.1660 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | 0.0000 | |
| 113 | A | A | 0.0000 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.7490 | |
| 117 | V | A | -1.4679 | |
| 118 | D | A | -2.9175 | |
| 119 | N | A | -2.7409 | |
| 120 | P | A | -1.8937 | |
| 121 | T | A | -1.5921 | |
| 122 | E | A | -2.2025 | |
| 123 | P | A | -0.6120 | |
| 124 | L | A | -0.4685 | |
| 125 | H | A | -0.9557 | |
| 126 | G | A | -2.0367 | |
| 127 | G | A | -2.5439 | |
| 128 | E | A | -3.1062 | |
| 129 | D | A | -3.4085 | |
| 130 | D | A | -2.5604 | |
| 131 | T | A | -1.9033 | |
| 132 | Q | A | -1.2585 | |
| 133 | A | A | -0.6535 | |
| 134 | L | A | -0.3007 | |
| 135 | S | A | -0.3020 | |
| 136 | F | A | 0.0000 | |
| 137 | T | A | -0.5207 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | L | A | 0.0000 | |
| 141 | K | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | E | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | R | A | -0.7546 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | L | A | -0.1409 | |
| 153 | G | A | 0.0000 | |
| 154 | K | A | -0.3253 | |
| 155 | Y | A | -0.4178 | |
| 156 | T | A | -0.9538 | |
| 157 | A | A | 0.0000 | |
| 158 | K | A | -2.4301 | |
| 159 | A | A | -1.1934 | |
| 160 | A | A | -0.6209 | |
| 161 | P | A | -0.4033 | |
| 162 | A | A | -0.0878 | |
| 163 | P | A | -0.2636 | |
| 164 | G | A | -0.1972 | |
| 165 | L | A | 0.4141 | |
| 166 | P | A | -0.1600 | |
| 167 | P | A | -0.4326 | |
| 168 | G | A | -0.3680 | |
| 169 | A | A | 0.1139 | |
| 170 | P | A | -0.3268 | |
| 171 | P | A | -0.7371 | |
| 172 | P | A | -0.7809 | |
| 173 | T | A | -1.4102 | |
| 174 | E | A | -1.7669 | |
| 175 | T | A | -0.9422 | |
| 176 | V | A | -0.4512 | |
| 177 | T | A | -0.1411 | |
| 178 | T | A | 0.0646 | |
| 179 | I | A | -0.2278 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | -1.0875 | |
| 182 | H | A | -0.9718 | |
| 183 | G | A | -0.7320 | |
| 184 | D | A | -0.7049 | |
| 185 | M | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.4788 | |
| 190 | F | A | -0.0098 | |
| 191 | G | A | -0.1945 | |
| 192 | A | A | -0.2572 | |
| 193 | K | A | -1.1876 | |
| 194 | N | A | -1.9161 | |
| 195 | Y | A | 0.0000 | |
| 196 | K | A | -4.0887 | |
| 197 | E | A | -3.3652 | |
| 198 | L | A | -2.2761 | |
| 199 | E | A | 0.0000 | |
| 200 | P | A | -2.6956 | |
| 201 | E | A | -3.0574 | |
| 202 | K | A | -3.8223 | |
| 203 | D | A | -2.4779 | |
| 204 | E | A | -1.7908 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -1.8383 | |
| 208 | I | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | R | A | -2.8993 | |
| 211 | D | A | -3.3040 | |
| 212 | T | A | -1.9672 | |
| 213 | T | A | -1.3369 | |
| 214 | T | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | V | A | 0.2016 | |
| 217 | F | A | 0.0000 | |
| 218 | D | A | -0.8938 | |
| 219 | Y | A | -1.3438 | |
| 220 | D | A | -2.4852 | |
| 221 | G | A | -1.7452 | |
| 222 | M | A | 0.0000 | |
| 223 | K | A | -2.6036 | |
| 224 | A | A | -1.5644 | |
| 225 | D | A | -1.4283 | |
| 226 | P | A | -1.0310 | |
| 227 | Y | A | -0.7238 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | R | A | -0.7273 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | T | A | -0.1539 | |
| 234 | Y | A | -0.2151 | |
| 235 | D | A | -1.0374 | |
| 236 | K | A | -1.7494 | |
| 237 | Y | A | -1.3208 | |
| 238 | E | A | -2.0414 | |
| 239 | K | A | -1.8914 | |
| 240 | S | A | -1.7211 | |
| 241 | S | A | -1.6610 | |
| 242 | D | A | -2.1895 | |
| 243 | S | A | -1.8870 | |
| 244 | K | A | -2.5896 | |
| 245 | K | A | -1.9692 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.7671 | |
| 249 | D | A | -1.3913 | |
| 250 | G | A | -0.8740 | |
| 251 | P | A | -0.2858 | |
| 252 | Q | A | 0.4549 | |
| 253 | L | A | 1.6316 | |
| 254 | F | A | 2.2955 | |
| 255 | P | A | 1.1706 | |
| 256 | L | A | 1.3297 | |
| 257 | P | A | 0.5001 | |
| 258 | A | A | 0.2528 | |
| 259 | A | A | 0.3259 | |
| 260 | P | A | -0.2336 | |
| 261 | P | A | 0.0098 | |
| 262 | P | A | 0.0673 | |
| 263 | S | A | 0.6535 | |
| 264 | P | A | 0.7001 | |
| 265 | L | A | 1.9273 | |
| 266 | Y | A | 1.7847 | |
| 267 | V | A | 1.9538 | |
| 268 | P | A | 1.3109 | |
| 269 | P | A | 0.7581 | |
| 270 | P | A | 0.0356 | |
| 271 | P | A | -0.0975 | |
| 272 | S | A | -0.3018 | |
| 273 | S | A | 0.2924 | |
| 274 | P | A | 0.3757 | |
| 275 | Y | A | 1.7508 | |
| 276 | A | A | 1.4060 | |
| 277 | V | A | 2.3664 | |
| 278 | L | A | 1.9543 | |
| 279 | P | A | 0.6027 | |
| 280 | P | A | -0.1114 | |
| 281 | Y | A | 0.1168 | |
| 282 | D | A | -0.7642 | |
| 283 | Y | A | 0.6275 | |
| 284 | F | A | 0.0463 | |
| 285 | T | A | -0.8456 | |
| 286 | L | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | -1.6412 | |
| 289 | R | A | 0.0000 | |
| 290 | G | A | -1.5555 | |
| 291 | E | A | -2.0424 | |
| 292 | I | A | -1.5197 | |
| 293 | T | A | -1.8478 | |
| 294 | E | A | -2.6880 | |
| 295 | K | A | -2.7835 | |
| 296 | D | A | -1.9944 | |
| 297 | L | A | -1.1742 | |
| 298 | L | A | 0.0000 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -0.9867 | |
| 301 | K | A | -1.0618 | |
| 302 | P | A | -0.5967 | |
| 303 | F | A | 0.1697 | |
| 304 | F | A | 0.0709 | |
| 305 | L | A | 0.0000 | |
| 306 | S | A | -0.9296 | |
| 307 | K | A | -2.0641 | |
| 308 | T | A | 0.0000 | |
| 309 | P | A | -1.1239 | |
| 310 | G | A | -1.2603 | |
| 311 | K | A | -1.5909 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | I | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9803 | |
| 319 | N | A | -0.9333 | |
| 320 | R | A | -1.3413 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | I | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | L | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | 0.0000 | |
| 331 | A | A | 0.0000 | |
| 332 | T | A | 0.0347 | |
| 333 | I | A | 0.0220 | |
| 334 | T | A | -0.3177 | |
| 335 | T | A | -0.6495 | |
| 336 | N | A | -1.0216 | |
| 337 | T | A | -0.7237 | |
| 338 | T | A | -0.5048 | |
| 339 | Q | A | -0.5794 | |
| 340 | T | A | -0.1881 | |
| 341 | A | A | -0.1311 | |
| 342 | T | A | -0.2642 | |
| 343 | P | A | -0.5383 | |
| 344 | A | A | -0.1030 | |
| 345 | P | A | 0.0784 | |
| 346 | N | A | -0.2562 | |
| 347 | V | A | 1.6842 | |
| 348 | Y | A | 1.6998 | |
| 349 | D | A | 0.4589 | |
| 350 | P | A | 0.1890 | |
| 351 | A | A | 0.2052 | |
| 352 | Y | A | 0.6824 | |
| 353 | Y | A | 0.2506 | |
| 354 | T | A | -0.2122 | |
| 355 | T | A | -0.6239 | |
| 356 | S | A | -0.7848 | |
| 357 | K | A | -0.8102 | |
| 358 | T | A | -0.5100 | |
| 359 | Y | A | 0.0000 | |
| 360 | S | A | -0.3755 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0868 | |
| 363 | Y | A | 0.0000 | |
| 364 | Q | A | -0.4328 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | V | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.6289 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.6809 | |
| 376 | L | A | -0.7341 | |
| 377 | T | A | -0.9538 | |
| 378 | P | A | -1.5323 | |
| 379 | D | A | -2.6485 | |
| 380 | V | A | 0.0000 | |
| 381 | L | A | -2.0319 | |
| 382 | E | A | -3.4464 | |
| 383 | E | A | 0.0000 | |
| 384 | L | A | 0.0000 | |
| 385 | R | A | -3.4465 | |
| 386 | R | A | -2.9720 | |
| 387 | R | A | 0.0000 | |
| 388 | D | A | -1.3075 | |
| 389 | P | A | -1.6638 | |
| 390 | S | A | -0.6966 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | V | A | -0.4267 | |
| 394 | N | A | -1.2280 | |
| 395 | W | A | -1.2532 | |
| 396 | N | A | -1.3658 | |
| 397 | L | A | 0.0000 | |
| 398 | P | A | 0.4057 | |
| 399 | F | A | 1.6733 | |
| 400 | I | A | 0.7724 | |
| 401 | P | A | 0.5897 | |
| 402 | P | A | 0.4823 | |
| 403 | V | A | 1.6479 | |
| 404 | V | A | 1.4913 | |
| 405 | R | A | -0.3613 | |
| 406 | P | A | -0.8442 | |
| 407 | D | A | -1.4791 | |
| 408 | P | A | -1.1191 | |
| 409 | L | A | -0.9230 | |
| 410 | A | A | -1.0705 | |
| 411 | G | A | -1.3238 | |
| 412 | K | A | -1.7437 | |
| 413 | K | A | -2.3885 | |
| 414 | F | A | -1.3420 | |
| 415 | I | A | -1.0606 | |
| 416 | E | A | -2.3465 | |
| 417 | I | A | 0.0000 | |
| 418 | D | A | -3.0249 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.1306 | |
| 421 | D | A | -2.9398 | |
| 422 | K | A | -2.8612 | |
| 423 | L | A | -1.2360 | |
| 424 | S | A | -1.0056 | |
| 425 | T | A | -0.3704 | |
| 426 | D | A | -1.2027 | |
| 427 | L | A | 0.0000 | |
| 428 | S | A | -1.4840 | |
| 429 | K | A | -2.0774 | |
| 430 | F | A | -1.2677 | |
| 431 | P | A | -1.1675 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | Q | A | -1.9369 | |
| 435 | E | A | -1.6719 | |
| 436 | F | A | -0.6550 | |
| 437 | L | A | -0.2195 | |
| 438 | N | A | -1.9378 | |
| 439 | R | A | -2.1538 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine