| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKFGDTENPTTYQHEGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRCGPEGHPLPAAPPPSPLYVPPPPSSPYAVLPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPAVNVYNPANFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9447 | |
| 2 | L | A | 1.9740 | |
| 3 | P | A | 0.7118 | |
| 4 | P | A | 0.1186 | |
| 5 | T | A | 0.2129 | |
| 6 | T | A | 0.1607 | |
| 7 | P | A | 0.2640 | |
| 8 | V | A | 1.2501 | |
| 9 | A | A | 0.0643 | |
| 10 | K | A | -1.1213 | |
| 11 | V | A | -0.3568 | |
| 12 | Q | A | -1.4906 | |
| 13 | S | A | -1.6354 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.6009 | |
| 16 | E | A | -2.5504 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4401 | |
| 20 | P | A | 0.0775 | |
| 21 | T | A | 0.1066 | |
| 22 | S | A | -0.1798 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1206 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2252 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7332 | |
| 31 | R | A | -2.6947 | |
| 32 | L | A | -0.8586 | |
| 33 | L | A | 1.0458 | |
| 34 | T | A | 1.3382 | |
| 35 | V | A | 1.9123 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2332 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6100 | |
| 40 | K | A | -1.8005 | |
| 41 | D | A | -0.9013 | |
| 42 | I | A | 0.8933 | |
| 43 | V | A | 1.0595 | |
| 44 | K | A | -1.1790 | |
| 45 | N | A | -1.9392 | |
| 46 | G | A | -1.2438 | |
| 47 | K | A | -0.9857 | |
| 48 | V | A | 1.6425 | |
| 49 | V | A | 2.0625 | |
| 50 | V | A | 1.3252 | |
| 51 | P | A | 0.4865 | |
| 52 | K | A | -0.5939 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1867 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4531 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.3317 | |
| 70 | K | A | -1.8693 | |
| 71 | F | A | -0.9247 | |
| 72 | A | A | -0.5899 | |
| 73 | L | A | -0.9257 | |
| 74 | P | A | -1.2466 | |
| 75 | Q | A | -2.4730 | |
| 76 | K | A | -3.0918 | |
| 77 | D | A | -2.9831 | |
| 78 | F | A | -1.6399 | |
| 79 | Y | A | -1.9318 | |
| 80 | D | A | -2.7425 | |
| 81 | P | A | -2.3200 | |
| 82 | E | A | -3.0315 | |
| 83 | K | A | -3.3914 | |
| 84 | E | A | -2.4515 | |
| 85 | R | A | -1.2808 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6049 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -1.0089 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3939 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.8072 | |
| 99 | G | A | -0.6145 | |
| 100 | P | A | -0.4336 | |
| 101 | L | A | -0.0472 | |
| 102 | G | A | -0.5132 | |
| 103 | K | A | -0.8483 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4169 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1896 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4812 | |
| 110 | L | A | 0.3671 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -0.9662 | |
| 113 | K | A | -0.1781 | |
| 114 | F | A | -1.1950 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.7241 | |
| 117 | T | A | -1.1732 | |
| 118 | E | A | -2.3777 | |
| 119 | N | A | -2.3016 | |
| 120 | P | A | -1.6391 | |
| 121 | T | A | -0.9056 | |
| 122 | T | A | -0.6070 | |
| 123 | Y | A | -0.0580 | |
| 124 | Q | A | -1.5032 | |
| 125 | H | A | -1.6804 | |
| 126 | E | A | -2.5734 | |
| 127 | G | A | -2.1853 | |
| 128 | A | A | -1.5607 | |
| 129 | D | A | -2.4375 | |
| 130 | D | A | -2.0512 | |
| 131 | R | A | -1.0049 | |
| 132 | V | A | 0.4301 | |
| 133 | A | A | 0.5481 | |
| 134 | F | A | 0.3427 | |
| 135 | S | A | -0.0057 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | 0.0000 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.2051 | |
| 140 | Q | A | -0.1595 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5625 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2706 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 0.9015 | |
| 157 | D | A | -0.0012 | |
| 158 | L | A | 0.4089 | |
| 159 | A | A | -0.1372 | |
| 160 | E | A | -1.5837 | |
| 161 | P | A | -0.3449 | |
| 162 | C | A | 0.1594 | |
| 163 | P | A | -0.2067 | |
| 164 | G | A | -0.1293 | |
| 165 | L | A | 0.4899 | |
| 166 | P | A | -0.1750 | |
| 167 | P | A | -0.3684 | |
| 168 | G | A | -0.4666 | |
| 169 | A | A | -0.0463 | |
| 170 | C | A | 0.5987 | |
| 171 | P | A | 0.4159 | |
| 172 | P | A | 0.4924 | |
| 173 | I | A | 1.4152 | |
| 174 | Q | A | 0.5158 | |
| 175 | L | A | 1.2390 | |
| 176 | V | A | 0.7223 | |
| 177 | N | A | -0.3583 | |
| 178 | S | A | -0.0173 | |
| 179 | V | A | 0.3498 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3758 | |
| 182 | D | A | 0.2625 | |
| 183 | G | A | -0.1785 | |
| 184 | D | A | -0.6240 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | -0.4702 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1295 | |
| 190 | F | A | 0.0902 | |
| 191 | G | A | -0.2438 | |
| 192 | N | A | -0.3472 | |
| 193 | M | A | -0.2849 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4085 | |
| 197 | E | A | -2.6291 | |
| 198 | L | A | -1.3404 | |
| 199 | Q | A | -2.5033 | |
| 200 | Q | A | -3.2903 | |
| 201 | D | A | -3.5578 | |
| 202 | R | A | -3.3022 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1873 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.4513 | |
| 211 | S | A | -1.9110 | |
| 212 | T | A | -1.6004 | |
| 213 | R | A | -2.3703 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.2405 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2945 | |
| 220 | L | A | 0.5405 | |
| 221 | K | A | -1.2380 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9096 | |
| 224 | N | A | -1.6354 | |
| 225 | E | A | -1.3527 | |
| 226 | A | A | -0.7782 | |
| 227 | Y | A | -0.4084 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6723 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.0848 | |
| 234 | F | A | 0.1996 | |
| 235 | G | A | -0.7247 | |
| 236 | R | A | -2.2223 | |
| 237 | R | A | -2.6198 | |
| 238 | E | A | -1.6145 | |
| 239 | Q | A | 0.0815 | |
| 240 | V | A | 1.5118 | |
| 241 | Y | A | 0.9805 | |
| 242 | A | A | 0.0673 | |
| 243 | R | A | -1.3325 | |
| 244 | H | A | -1.1228 | |
| 245 | F | A | -0.1235 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.5509 | |
| 249 | C | A | -1.1078 | |
| 250 | G | A | -0.9380 | |
| 251 | P | A | -0.9349 | |
| 252 | E | A | -1.2523 | |
| 253 | G | A | -1.2234 | |
| 254 | H | A | -1.4039 | |
| 255 | P | A | -0.8071 | |
| 256 | L | A | 0.4478 | |
| 257 | P | A | 0.0942 | |
| 258 | A | A | 0.4147 | |
| 259 | A | A | 0.0000 | |
| 260 | P | A | -0.0594 | |
| 261 | P | A | -0.0064 | |
| 262 | P | A | 0.0130 | |
| 263 | S | A | 0.5284 | |
| 264 | P | A | 0.6998 | |
| 265 | L | A | 1.8611 | |
| 266 | Y | A | 1.7114 | |
| 267 | V | A | 1.9222 | |
| 268 | P | A | 1.1867 | |
| 269 | P | A | 0.6655 | |
| 270 | P | A | -0.1623 | |
| 271 | P | A | -0.1525 | |
| 272 | S | A | -0.3241 | |
| 273 | S | A | 0.2173 | |
| 274 | P | A | 0.4629 | |
| 275 | Y | A | 1.4888 | |
| 276 | A | A | 1.2776 | |
| 277 | V | A | 2.2129 | |
| 278 | L | A | 1.7298 | |
| 279 | P | A | 0.2233 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.2448 | |
| 282 | D | A | -0.8468 | |
| 283 | Y | A | 0.8328 | |
| 284 | F | A | 0.7420 | |
| 285 | G | A | 0.1663 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.7855 | |
| 291 | L | A | 1.5767 | |
| 292 | V | A | 0.4888 | |
| 293 | S | A | -0.2145 | |
| 294 | S | A | -0.8440 | |
| 295 | D | A | -1.8786 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1058 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.7028 | |
| 301 | R | A | -1.9788 | |
| 302 | P | A | -1.0206 | |
| 303 | F | A | -0.1028 | |
| 304 | W | A | -0.3201 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.1768 | |
| 307 | R | A | -2.9050 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.7845 | |
| 310 | G | A | -1.3484 | |
| 311 | N | A | -1.3638 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.7888 | |
| 319 | N | A | -0.8619 | |
| 320 | E | A | -1.0232 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.4532 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.2742 | |
| 333 | N | A | 0.3255 | |
| 334 | F | A | 1.3832 | |
| 335 | T | A | 0.7488 | |
| 336 | I | A | 0.4301 | |
| 337 | S | A | -0.8254 | |
| 338 | Q | A | -1.4601 | |
| 339 | Q | A | -0.6763 | |
| 340 | L | A | 0.7651 | |
| 341 | S | A | 0.3398 | |
| 342 | T | A | 0.0696 | |
| 343 | P | A | -0.1850 | |
| 344 | A | A | 0.1640 | |
| 345 | V | A | 0.8222 | |
| 346 | N | A | 0.1025 | |
| 347 | V | A | 1.7923 | |
| 348 | Y | A | 1.6412 | |
| 349 | N | A | 0.1683 | |
| 350 | P | A | -0.6116 | |
| 351 | A | A | -0.1583 | |
| 352 | N | A | 0.0903 | |
| 353 | F | A | -0.5015 | |
| 354 | K | A | -1.6954 | |
| 355 | N | A | -1.6668 | |
| 356 | Y | A | -0.0931 | |
| 357 | L | A | 0.6857 | |
| 358 | R | A | 0.9219 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.1288 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.3727 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9788 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6625 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2766 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3231 | |
| 376 | L | A | -1.7233 | |
| 377 | D | A | -2.0044 | |
| 378 | P | A | -1.0735 | |
| 379 | G | A | -1.0880 | |
| 380 | V | A | 0.0000 | |
| 381 | L | A | -0.6016 | |
| 382 | A | A | -0.7067 | |
| 383 | H | A | -0.8872 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4364 | |
| 386 | T | A | -0.5982 | |
| 387 | M | A | -0.3882 | |
| 388 | N | A | -0.8783 | |
| 389 | P | A | -1.2501 | |
| 390 | T | A | -1.4818 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4573 | |
| 393 | E | A | -2.8104 | |
| 394 | N | A | -2.3249 | |
| 395 | W | A | -1.4712 | |
| 396 | N | A | -1.2709 | |
| 397 | L | A | -0.2083 | |
| 398 | G | A | 0.5987 | |
| 399 | F | A | 2.3761 | |
| 400 | V | A | 1.7507 | |
| 401 | P | A | 0.0557 | |
| 402 | P | A | -1.8616 | |
| 403 | K | A | -3.3730 | |
| 404 | E | A | -3.8530 | |
| 405 | R | A | -4.1148 | |
| 406 | E | A | -3.8479 | |
| 407 | D | A | -2.8805 | |
| 408 | P | A | -1.7705 | |
| 409 | Y | A | -0.9935 | |
| 410 | K | A | -2.1081 | |
| 411 | G | A | -0.6287 | |
| 412 | L | A | 0.6644 | |
| 413 | I | A | 1.6445 | |
| 414 | F | A | 0.7089 | |
| 415 | W | A | -0.2826 | |
| 416 | E | A | -1.6124 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9450 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0730 | |
| 421 | E | A | -2.6934 | |
| 422 | R | A | -2.2507 | |
| 423 | F | A | -1.2312 | |
| 424 | S | A | -1.4884 | |
| 425 | Q | A | -1.8202 | |
| 426 | D | A | -3.1002 | |
| 427 | L | A | 0.0000 | |
| 428 | D | A | -3.1991 | |
| 429 | Q | A | -2.8224 | |
| 430 | F | A | -1.7568 | |
| 431 | A | A | -1.1734 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.4024 | |
| 435 | K | A | -1.2765 | |
| 436 | F | A | -0.1670 | |
| 437 | L | A | 0.6781 | |
| 438 | Y | A | 0.5880 | |
| 439 | Q | A | -0.4312 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine