| Chain sequence(s) |
A: SWLSKTAKKLENSAKKRISEGIAIAIQGGPR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:51)
[INFO] Main: Simulation completed successfully. (00:00:51)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | 0.4210 | |
| 2 | W | A | 1.0355 | |
| 3 | L | A | 1.0436 | |
| 4 | S | A | -0.3620 | |
| 5 | K | A | -1.8930 | |
| 6 | T | A | -1.0698 | |
| 7 | A | A | -1.3251 | |
| 8 | K | A | -3.0530 | |
| 9 | K | A | -2.8708 | |
| 10 | L | A | -1.5123 | |
| 11 | E | A | -3.5195 | |
| 12 | N | A | -3.1488 | |
| 13 | S | A | -2.3685 | |
| 14 | A | A | -2.5001 | |
| 15 | K | A | -3.3154 | |
| 16 | K | A | -3.4349 | |
| 17 | R | A | -3.0269 | |
| 18 | I | A | -0.1101 | |
| 19 | S | A | -0.8111 | |
| 20 | E | A | -1.3405 | |
| 21 | G | A | 0.5086 | |
| 22 | I | A | 2.2308 | |
| 23 | A | A | 1.5982 | |
| 24 | I | A | 2.4262 | |
| 25 | A | A | 1.8194 | |
| 26 | I | A | 2.1943 | |
| 27 | Q | A | 0.1995 | |
| 28 | G | A | 0.0611 | |
| 29 | G | A | -0.0986 | |
| 30 | P | A | -1.2442 | |
| 31 | R | A | -2.2562 |