Project name: 18.30A1

Status: done

Started: 2026-07-07 08:35:10
Settings
Chain sequence(s) H: EVQLQQSGPELVKPGASVKISCKASGYTFTAYYINWVKQSHGKSLEWIGDINPNNGIINYNHKFKGKASLTVDKSSSTAYMELRSLTSEDSAVYYCAKTGEWTVGYFDVWGTGTMVTVSS
L: QIVLTQSPAIMSASPGEKVTISCSASSSVSYMYWYQQKPGSSPKPWIYRTSNLASGVPTRFSGSGSGTSYSLTISSMEAEDAATYYCQQYHSYPRTFGGGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:28)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:30)
Show buried residues

Minimal score value
-2.8303
Maximal score value
1.4649
Average score
-0.4861
Total score value
-109.8563

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -2.0008
2 V H -1.0299
3 Q H -1.9602
4 L H 0.0000
5 Q H -2.0137
6 Q H 0.0000
7 S H -0.9341
8 G H -0.6804
9 P H -0.1905
11 E H -0.2236
12 L H 0.9306
13 V H -0.2216
14 K H -1.6985
15 P H -1.4081
16 G H -1.2440
17 A H -1.0256
18 S H -1.1760
19 V H 0.0000
20 K H -1.3933
21 I H 0.0000
22 S H -0.7520
23 C H 0.0000
24 K H -1.8074
25 A H 0.0000
26 S H -1.3477
27 G H -1.1435
28 Y H -0.3992
29 T H 0.0132
30 F H 0.0000
35 T H -0.9210
36 A H 0.0312
37 Y H 0.3469
38 Y H 0.6331
39 I H 0.0000
40 N H 0.0000
41 W H 0.0000
42 V H 0.0000
43 K H 0.0000
44 Q H -0.8799
45 S H -1.4216
46 H H -1.8425
47 G H -1.7981
48 K H -2.4460
49 S H -1.4280
50 L H 0.0000
51 E H -0.9584
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 D H 0.0000
56 I H 0.0000
57 N H 0.0292
58 P H 0.0000
59 N H -1.9416
62 N H -1.5298
63 G H -0.2748
64 I H 1.4649
65 I H 1.2713
66 N H 0.2299
67 Y H -0.7623
68 N H -1.5321
69 H H -2.4814
70 K H -2.8179
71 F H 0.0000
72 K H -2.8303
74 G H -1.9188
75 K H -1.7775
76 A H 0.0000
77 S H -0.6822
78 L H 0.0000
79 T H 0.0068
80 V H -0.8512
81 D H -1.5303
82 K H -2.4023
83 S H -1.1963
84 S H -1.0310
85 S H -1.2146
86 T H 0.0000
87 A H 0.0000
88 Y H -0.2602
89 M H 0.0000
90 E H -0.9972
91 L H 0.0000
92 R H -1.3257
93 S H -1.1258
94 L H 0.0000
95 T H -1.1600
96 S H -1.2830
97 E H -1.7280
98 D H 0.0000
99 S H -0.5346
100 A H 0.0000
101 V H 0.2470
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 K H 0.0000
107 T H 0.1846
108 G H -0.0848
109 E H -0.1144
110 W H 0.9243
111 T H 0.3086
112 V H 0.0000
113 G H 0.0000
114 Y H 0.1100
115 F H 0.0000
116 D H -0.5219
117 V H -0.2545
118 W H 0.0000
119 G H 0.0000
120 T H -0.5149
121 G H -0.2413
122 T H 0.0000
123 M H 0.2788
124 V H 0.0000
125 T H -0.0169
126 V H 0.0000
127 S H -0.6221
128 S H -0.7555
1 Q L -0.7033
2 I L 0.0000
3 V L 1.2377
4 L L 0.0000
5 T L 0.0675
6 Q L 0.0000
7 S L -0.1333
8 P L 0.2299
9 A L 0.5492
10 I L 1.3685
11 M L 0.3453
12 S L -0.7377
13 A L 0.0000
14 S L -1.6438
15 P L -1.7615
16 G L -1.8148
17 E L -2.4124
18 K L -2.4975
19 V L 0.0000
20 T L -0.6407
21 I L 0.0000
22 S L -0.3547
23 C L 0.0000
24 S L -0.2004
25 A L 0.0000
26 S L 0.0354
27 S L -0.2587
28 S L -0.5793
29 V L 0.0000
37 S L -0.3516
38 Y L 0.0609
39 M L 0.0000
40 Y L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L -0.9428
45 K L -1.3592
46 P L -0.8176
47 G L -0.8036
48 S L -0.7599
49 S L 0.0000
50 P L 0.0000
51 K L -1.1543
52 P L -0.5074
53 W L -0.3143
54 I L 0.0000
55 Y L -0.1920
56 R L -0.4622
57 T L 0.0000
65 S L -0.6924
66 N L -0.9888
67 L L -0.2537
68 A L -0.4290
69 S L -0.4876
70 G L -0.5081
71 V L 0.0000
72 P L -0.2437
74 T L -0.2545
75 R L -0.7443
76 F L 0.0000
77 S L -0.4491
78 G L -0.4974
79 S L -0.6229
80 G L -0.6257
83 S L -0.5440
84 G L -0.5403
85 T L -0.5278
86 S L -0.6383
87 Y L 0.0000
88 S L -0.3932
89 L L 0.0000
90 T L -0.5958
91 I L 0.0000
92 S L -1.4022
93 S L -1.7312
94 M L 0.0000
95 E L -1.8740
96 A L -1.6004
97 E L -2.2177
98 D L 0.0000
99 A L -1.4783
100 A L 0.0000
101 T L -0.6660
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 Y L 0.1504
108 H L -0.4081
109 S L -0.0915
114 Y L 0.5089
115 P L -0.3182
116 R L 0.0597
117 T L 0.0000
118 F L 0.0000
119 G L 0.0000
120 G L -0.7907
121 G L 0.0000
122 T L 0.0000
123 K L -0.7379
124 L L 0.0000
125 E L -1.3669
126 I L -1.0303
127 K L -1.6663
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Laboratory of Theory of Biopolymers 2018