| Chain sequence(s) |
H: QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARERSDFWDFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS
L: IQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYEFIGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:48)
[INFO] Main: Simulation completed successfully. (00:03:50)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.2271 | |
| 2 | V | H | -0.3710 | |
| 3 | Q | H | -0.8014 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.4657 | |
| 6 | Q | H | -0.2725 | |
| 7 | S | H | -0.5588 | |
| 8 | G | H | -0.3931 | |
| 9 | A | H | -0.1400 | |
| 10 | E | H | -0.3033 | |
| 11 | V | H | 0.1971 | |
| 12 | K | H | -0.9915 | |
| 13 | K | H | -1.9158 | |
| 14 | P | H | -2.2878 | |
| 15 | G | H | -2.2043 | |
| 16 | A | H | -1.4598 | |
| 17 | S | H | -1.6503 | |
| 18 | V | H | 0.0000 | |
| 19 | K | H | -1.7282 | |
| 20 | V | H | 0.0000 | |
| 21 | S | H | -0.5583 | |
| 22 | C | H | 0.0000 | |
| 23 | K | H | -0.4485 | |
| 24 | A | H | 0.0000 | |
| 25 | S | H | -0.3838 | |
| 26 | G | H | -0.7115 | |
| 27 | Y | H | -0.2539 | |
| 28 | T | H | -0.3059 | |
| 29 | F | H | 0.0000 | |
| 30 | T | H | -0.7485 | |
| 31 | G | H | -0.5758 | |
| 32 | Y | H | -0.2200 | |
| 33 | Y | H | -0.1471 | |
| 34 | M | H | 0.0000 | |
| 35 | H | H | 0.0000 | |
| 36 | W | H | 0.0000 | |
| 37 | V | H | 0.0000 | |
| 38 | R | H | 0.0000 | |
| 39 | Q | H | -0.6162 | |
| 40 | A | H | -0.9882 | |
| 41 | P | H | -0.8271 | |
| 42 | G | H | -1.2272 | |
| 43 | Q | H | -1.7122 | |
| 44 | G | H | -1.0562 | |
| 45 | L | H | 0.0000 | |
| 46 | E | H | -0.6944 | |
| 47 | W | H | 0.0000 | |
| 48 | M | H | 0.0000 | |
| 49 | G | H | 0.0000 | |
| 50 | W | H | -0.2697 | |
| 51 | I | H | 0.0000 | |
| 52 | N | H | -0.8600 | |
| 52A | P | H | 0.0000 | |
| 53 | N | H | -1.6743 | |
| 54 | S | H | -1.0942 | |
| 55 | G | H | -1.0048 | |
| 56 | G | H | -0.9203 | |
| 57 | T | H | -0.7197 | |
| 58 | N | H | -1.4546 | |
| 59 | Y | H | -1.3604 | |
| 60 | A | H | -1.6790 | |
| 61 | Q | H | -2.5842 | |
| 62 | K | H | -2.6835 | |
| 63 | F | H | 0.0000 | |
| 64 | Q | H | -2.5180 | |
| 65 | G | H | -1.7683 | |
| 66 | R | H | -1.6641 | |
| 67 | V | H | 0.0000 | |
| 68 | T | H | -0.8435 | |
| 69 | M | H | 0.0000 | |
| 70 | T | H | -0.6009 | |
| 71 | R | H | -1.1422 | |
| 72 | D | H | -0.9172 | |
| 72A | T | H | -0.4899 | |
| 72B | S | H | 0.0912 | |
| 72C | I | H | 0.7311 | |
| 73 | S | H | -0.1015 | |
| 74 | T | H | 0.0000 | |
| 75 | A | H | 0.0000 | |
| 76 | Y | H | -0.7541 | |
| 77 | M | H | 0.0000 | |
| 78 | E | H | -1.3121 | |
| 79 | L | H | 0.0000 | |
| 80 | S | H | -1.8853 | |
| 81 | R | H | -2.8106 | |
| 82 | L | H | 0.0000 | |
| 83 | R | H | -3.3501 | |
| 84 | S | H | -2.3206 | |
| 85 | D | H | -2.5120 | |
| 86 | D | H | 0.0000 | |
| 87 | T | H | -0.9481 | |
| 88 | A | H | 0.0000 | |
| 89 | V | H | 0.0745 | |
| 90 | Y | H | 0.0000 | |
| 91 | Y | H | 0.0000 | |
| 92 | C | H | 0.0000 | |
| 93 | A | H | 0.0000 | |
| 94 | R | H | 0.0000 | |
| 95 | E | H | -0.5623 | |
| 96 | R | H | -0.8896 | |
| 97 | S | H | -1.0224 | |
| 98 | D | H | -1.6375 | |
| 99 | F | H | -0.6740 | |
| 100 | W | H | 0.0000 | |
| 100A | D | H | 0.0000 | |
| 100B | F | H | 0.0000 | |
| 101 | D | H | -0.7581 | |
| 102 | L | H | -0.5756 | |
| 103 | W | H | -0.6022 | |
| 104 | G | H | 0.0000 | |
| 105 | R | H | -1.9508 | |
| 106 | G | H | 0.0000 | |
| 107 | T | H | 0.0000 | |
| 108 | L | H | 0.1547 | |
| 109 | V | H | 0.0000 | |
| 110 | T | H | 0.0000 | |
| 111 | V | H | 0.0000 | |
| 112 | S | H | -1.2065 | |
| 113 | S | H | -1.0481 | |
| 114 | A | H | -0.5320 | |
| 115 | S | H | -0.5969 | |
| 116 | T | H | -0.5636 | |
| 117 | K | H | -1.1702 | |
| 118 | G | H | -1.3053 | |
| 119 | P | H | 0.0000 | |
| 120 | S | H | -0.3448 | |
| 121 | V | H | 0.0000 | |
| 122 | F | H | 0.0000 | |
| 123 | P | H | -1.2517 | |
| 124 | L | H | 0.0000 | |
| 125 | A | H | -1.4726 | |
| 126 | P | H | 0.0000 | |
| 127 | S | H | -1.2810 | |
| 128 | S | H | -1.0059 | |
| 129 | K | H | -1.2021 | |
| 130 | S | H | 0.0000 | |
| 131 | T | H | -0.7387 | |
| 132 | S | H | -0.8298 | |
| 133 | G | H | -0.8599 | |
| 134 | G | H | -0.9098 | |
| 135 | T | H | -0.6179 | |
| 136 | A | H | 0.0000 | |
| 137 | A | H | 0.0000 | |
| 138 | L | H | 0.0000 | |
| 139 | G | H | 0.0000 | |
| 140 | C | H | 0.0000 | |
| 141 | L | H | 0.0000 | |
| 142 | V | H | 0.0000 | |
| 143 | K | H | 0.0000 | |
| 144 | D | H | -0.3703 | |
| 145 | Y | H | 0.0000 | |
| 146 | F | H | 0.0000 | |
| 147 | P | H | 0.0000 | |
| 148 | E | H | -0.4690 | |
| 149 | P | H | -0.7715 | |
| 150 | V | H | -0.6871 | |
| 151 | T | H | -0.5453 | |
| 152 | V | H | -0.3001 | |
| 153 | S | H | -0.3285 | |
| 154 | W | H | 0.0000 | |
| 155 | N | H | -0.7195 | |
| 156 | S | H | -0.5904 | |
| 157 | G | H | -0.3708 | |
| 158 | A | H | -0.1855 | |
| 159 | L | H | 0.0539 | |
| 160 | T | H | -0.1155 | |
| 161 | S | H | -0.1349 | |
| 162 | G | H | -0.1144 | |
| 163 | V | H | 0.2351 | |
| 164 | H | H | -0.2592 | |
| 165 | T | H | 0.0424 | |
| 166 | F | H | 0.0000 | |
| 167 | P | H | -0.2895 | |
| 168 | A | H | 0.1299 | |
| 169 | V | H | 0.4325 | |
| 170 | L | H | 1.2874 | |
| 171 | Q | H | 0.3306 | |
| 172 | S | H | -0.1640 | |
| 173 | S | H | -0.1449 | |
| 174 | G | H | 0.1021 | |
| 175 | L | H | 0.1621 | |
| 176 | Y | H | 0.4163 | |
| 177 | S | H | 0.0000 | |
| 178 | L | H | 0.0000 | |
| 179 | S | H | 0.0000 | |
| 180 | S | H | 0.0000 | |
| 181 | V | H | 0.0000 | |
| 182 | V | H | 0.0000 | |
| 183 | T | H | -0.0873 | |
| 184 | V | H | 0.0000 | |
| 185 | P | H | -0.5412 | |
| 186 | S | H | -0.5991 | |
| 187 | S | H | -0.6078 | |
| 188 | S | H | -0.5845 | |
| 189 | L | H | -0.7435 | |
| 190 | G | H | -0.9100 | |
| 191 | T | H | -0.7100 | |
| 192 | Q | H | -1.1191 | |
| 193 | T | H | -1.1432 | |
| 194 | Y | H | 0.0000 | |
| 195 | I | H | -1.2478 | |
| 196 | C | H | 0.0000 | |
| 197 | N | H | -1.4149 | |
| 198 | V | H | 0.0000 | |
| 199 | N | H | -1.7732 | |
| 200 | H | H | 0.0000 | |
| 201 | K | H | -2.7639 | |
| 202 | P | H | -1.5623 | |
| 203 | S | H | -1.8226 | |
| 204 | N | H | -2.6012 | |
| 205 | T | H | -2.0336 | |
| 206 | K | H | -2.5675 | |
| 207 | V | H | -1.3385 | |
| 208 | D | H | -2.4923 | |
| 209 | K | H | -2.0527 | |
| 210 | R | H | -2.7107 | |
| 211 | V | H | 0.0000 | |
| 212 | E | H | -2.9046 | |
| 213 | P | H | -2.1629 | |
| 214 | K | H | -2.3990 | |
| 215 | S | H | -1.3547 | |
| 2 | I | L | 1.0193 | |
| 3 | Q | L | -0.4983 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.7441 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.4730 | |
| 8 | P | L | -0.5238 | |
| 9 | S | L | -0.7133 | |
| 10 | S | L | -0.7369 | |
| 11 | L | L | -0.5229 | |
| 12 | S | L | -0.7731 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.8741 | |
| 15 | V | L | -0.0311 | |
| 16 | G | L | -0.7146 | |
| 17 | D | L | -1.7292 | |
| 18 | R | L | -2.2354 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6315 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.7118 | |
| 23 | C | L | 0.0000 | |
| 24 | Q | L | -2.1306 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.3208 | |
| 27 | Q | L | -2.1227 | |
| 28 | D | L | -2.5234 | |
| 29 | I | L | -0.6291 | |
| 30 | S | L | -0.9128 | |
| 31 | N | L | -1.6264 | |
| 32 | Y | L | -0.3751 | |
| 33 | L | L | 0.0000 | |
| 34 | N | L | 0.0000 | |
| 35 | W | L | 0.0000 | |
| 36 | Y | L | 0.0000 | |
| 37 | Q | L | 0.0000 | |
| 38 | Q | L | -1.4775 | |
| 39 | K | L | -1.9016 | |
| 40 | P | L | -1.5790 | |
| 41 | G | L | -1.7786 | |
| 42 | K | L | -2.8062 | |
| 43 | A | L | -1.9689 | |
| 44 | P | L | 0.0000 | |
| 45 | K | L | -1.9187 | |
| 46 | L | L | 0.0000 | |
| 47 | L | L | 0.0000 | |
| 48 | I | L | 0.0000 | |
| 49 | Y | L | -0.1975 | |
| 50 | D | L | -0.8892 | |
| 51 | A | L | 0.0000 | |
| 52 | S | L | -0.7452 | |
| 53 | N | L | -0.9269 | |
| 54 | L | L | -0.2452 | |
| 55 | E | L | -0.6081 | |
| 56 | T | L | -0.4132 | |
| 57 | G | L | -0.5291 | |
| 58 | V | L | 0.0000 | |
| 59 | P | L | -0.4246 | |
| 60 | S | L | -0.4509 | |
| 61 | R | L | -0.7087 | |
| 62 | F | L | 0.0000 | |
| 63 | S | L | -0.4492 | |
| 64 | G | L | -0.4730 | |
| 65 | S | L | -0.8780 | |
| 66 | G | L | -1.3167 | |
| 67 | S | L | -1.6305 | |
| 68 | G | L | -1.8412 | |
| 69 | T | L | -2.3183 | |
| 70 | D | L | -2.7377 | |
| 71 | F | L | 0.0000 | |
| 72 | T | L | -0.7347 | |
| 73 | F | L | 0.0000 | |
| 74 | T | L | -0.6009 | |
| 75 | I | L | 0.0000 | |
| 76 | S | L | -1.2807 | |
| 77 | S | L | -1.0750 | |
| 78 | L | L | 0.0000 | |
| 79 | Q | L | -0.7632 | |
| 80 | P | L | -1.3141 | |
| 81 | E | L | -1.8864 | |
| 82 | D | L | 0.0000 | |
| 83 | I | L | -1.0056 | |
| 84 | A | L | 0.0000 | |
| 85 | T | L | -0.8474 | |
| 86 | Y | L | 0.0000 | |
| 87 | Y | L | 0.0000 | |
| 88 | C | L | 0.0000 | |
| 89 | Q | L | 0.0000 | |
| 90 | Q | L | 0.0000 | |
| 91 | Y | L | 0.2515 | |
| 92 | E | L | -0.2144 | |
| 93 | F | L | 0.5096 | |
| 94 | I | L | 0.0584 | |
| 95 | G | L | 0.0000 | |
| 96 | P | L | -0.7812 | |
| 97 | G | L | 0.0000 | |
| 98 | T | L | 0.0000 | |
| 99 | K | L | -1.5055 | |
| 100 | V | L | 0.0000 | |
| 101 | D | L | 0.0000 | |
| 102 | I | L | 0.0000 | |
| 103 | K | L | -1.6488 | |
| 104 | R | L | -1.0327 | |
| 105 | T | L | -0.1726 | |
| 106 | V | L | 0.4352 | |
| 107 | A | L | 0.1110 | |
| 108 | A | L | -0.0726 | |
| 109 | P | L | 0.0000 | |
| 110 | S | L | -0.1204 | |
| 111 | V | L | -0.1649 | |
| 112 | F | L | 0.0000 | |
| 113 | I | L | 0.0000 | |
| 114 | F | L | 0.0000 | |
| 115 | P | L | -0.8420 | |
| 116 | P | L | -0.6796 | |
| 117 | S | L | -1.5745 | |
| 118 | D | L | -2.6314 | |
| 119 | E | L | -2.2510 | |
| 120 | Q | L | 0.0000 | |
| 121 | L | L | -1.7935 | |
| 122 | K | L | -2.5866 | |
| 123 | S | L | -1.6037 | |
| 124 | G | L | -1.4391 | |
| 125 | T | L | -1.1501 | |
| 126 | A | L | 0.0000 | |
| 127 | S | L | 0.0000 | |
| 128 | V | L | 0.0000 | |
| 129 | V | L | 0.0000 | |
| 130 | C | L | 0.0000 | |
| 131 | L | L | 0.0000 | |
| 132 | L | L | 0.0000 | |
| 133 | N | L | 0.0000 | |
| 134 | N | L | -0.6924 | |
| 135 | F | L | 0.0000 | |
| 136 | Y | L | 0.0000 | |
| 137 | P | L | -1.2362 | |
| 138 | R | L | -1.6864 | |
| 139 | E | L | -2.5570 | |
| 140 | A | L | -1.8786 | |
| 141 | K | L | -1.9842 | |
| 142 | V | L | -0.9411 | |
| 143 | Q | L | -0.4320 | |
| 144 | W | L | 0.0000 | |
| 145 | K | L | -0.6689 | |
| 146 | V | L | 0.0000 | |
| 147 | D | L | -2.1910 | |
| 148 | N | L | -1.6609 | |
| 149 | A | L | -0.3086 | |
| 150 | L | L | 0.6885 | |
| 151 | Q | L | -0.1046 | |
| 152 | S | L | -0.4873 | |
| 153 | G | L | -0.9167 | |
| 154 | N | L | -0.8465 | |
| 155 | S | L | -1.1504 | |
| 156 | Q | L | -1.4616 | |
| 157 | E | L | -1.9033 | |
| 158 | S | L | -0.8697 | |
| 159 | V | L | -0.2720 | |
| 160 | T | L | -0.8697 | |
| 161 | E | L | -1.9974 | |
| 162 | Q | L | 0.0000 | |
| 163 | D | L | -2.0510 | |
| 164 | S | L | -2.0575 | |
| 165 | K | L | -2.2548 | |
| 166 | D | L | -1.6764 | |
| 167 | S | L | -1.7923 | |
| 168 | T | L | 0.0000 | |
| 169 | Y | L | 0.0000 | |
| 170 | S | L | 0.0000 | |
| 171 | L | L | 0.0000 | |
| 172 | S | L | 0.0000 | |
| 173 | S | L | 0.0000 | |
| 174 | T | L | -0.7014 | |
| 175 | L | L | 0.0000 | |
| 176 | T | L | -0.4569 | |
| 177 | L | L | -0.7639 | |
| 178 | S | L | -1.2218 | |
| 179 | K | L | -2.1961 | |
| 180 | A | L | -2.1272 | |
| 181 | D | L | -3.1700 | |
| 182 | Y | L | 0.0000 | |
| 183 | E | L | -3.9752 | |
| 184 | K | L | -3.9471 | |
| 185 | H | L | -3.5819 | |
| 186 | K | L | -3.4805 | |
| 187 | V | L | -2.0391 | |
| 188 | Y | L | 0.0000 | |
| 189 | A | L | 0.0000 | |
| 190 | C | L | 0.0000 | |
| 191 | E | L | -0.4717 | |
| 192 | V | L | 0.0000 | |
| 193 | T | L | -1.0928 | |
| 194 | H | L | 0.0000 | |
| 195 | Q | L | -1.5725 | |
| 196 | G | L | -0.4179 | |
| 197 | L | L | -0.2612 | |
| 198 | S | L | -0.4670 | |
| 199 | S | L | -0.4567 | |
| 200 | P | L | -0.5771 | |
| 201 | V | L | 0.0510 | |
| 202 | T | L | -0.3464 | |
| 203 | K | L | -0.7012 | |
| 204 | S | L | -0.7119 | |
| 205 | F | L | -1.0818 | |
| 206 | N | L | -2.1278 | |
| 207 | R | L | -2.3783 | |
| 208 | G | L | -1.4767 |