Project name: 5F7E

Status: done

Started: 2026-03-23 10:56:21
Settings
Chain sequence(s) H: QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARERSDFWDFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS
L: IQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYEFIGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:48)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:50)
Show buried residues

Minimal score value
-3.9752
Maximal score value
1.2874
Average score
-0.7049
Total score value
-301.7005

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.2271
2 V H -0.3710
3 Q H -0.8014
4 L H 0.0000
5 V H 0.4657
6 Q H -0.2725
7 S H -0.5588
8 G H -0.3931
9 A H -0.1400
10 E H -0.3033
11 V H 0.1971
12 K H -0.9915
13 K H -1.9158
14 P H -2.2878
15 G H -2.2043
16 A H -1.4598
17 S H -1.6503
18 V H 0.0000
19 K H -1.7282
20 V H 0.0000
21 S H -0.5583
22 C H 0.0000
23 K H -0.4485
24 A H 0.0000
25 S H -0.3838
26 G H -0.7115
27 Y H -0.2539
28 T H -0.3059
29 F H 0.0000
30 T H -0.7485
31 G H -0.5758
32 Y H -0.2200
33 Y H -0.1471
34 M H 0.0000
35 H H 0.0000
36 W H 0.0000
37 V H 0.0000
38 R H 0.0000
39 Q H -0.6162
40 A H -0.9882
41 P H -0.8271
42 G H -1.2272
43 Q H -1.7122
44 G H -1.0562
45 L H 0.0000
46 E H -0.6944
47 W H 0.0000
48 M H 0.0000
49 G H 0.0000
50 W H -0.2697
51 I H 0.0000
52 N H -0.8600
52A P H 0.0000
53 N H -1.6743
54 S H -1.0942
55 G H -1.0048
56 G H -0.9203
57 T H -0.7197
58 N H -1.4546
59 Y H -1.3604
60 A H -1.6790
61 Q H -2.5842
62 K H -2.6835
63 F H 0.0000
64 Q H -2.5180
65 G H -1.7683
66 R H -1.6641
67 V H 0.0000
68 T H -0.8435
69 M H 0.0000
70 T H -0.6009
71 R H -1.1422
72 D H -0.9172
72A T H -0.4899
72B S H 0.0912
72C I H 0.7311
73 S H -0.1015
74 T H 0.0000
75 A H 0.0000
76 Y H -0.7541
77 M H 0.0000
78 E H -1.3121
79 L H 0.0000
80 S H -1.8853
81 R H -2.8106
82 L H 0.0000
83 R H -3.3501
84 S H -2.3206
85 D H -2.5120
86 D H 0.0000
87 T H -0.9481
88 A H 0.0000
89 V H 0.0745
90 Y H 0.0000
91 Y H 0.0000
92 C H 0.0000
93 A H 0.0000
94 R H 0.0000
95 E H -0.5623
96 R H -0.8896
97 S H -1.0224
98 D H -1.6375
99 F H -0.6740
100 W H 0.0000
100A D H 0.0000
100B F H 0.0000
101 D H -0.7581
102 L H -0.5756
103 W H -0.6022
104 G H 0.0000
105 R H -1.9508
106 G H 0.0000
107 T H 0.0000
108 L H 0.1547
109 V H 0.0000
110 T H 0.0000
111 V H 0.0000
112 S H -1.2065
113 S H -1.0481
114 A H -0.5320
115 S H -0.5969
116 T H -0.5636
117 K H -1.1702
118 G H -1.3053
119 P H 0.0000
120 S H -0.3448
121 V H 0.0000
122 F H 0.0000
123 P H -1.2517
124 L H 0.0000
125 A H -1.4726
126 P H 0.0000
127 S H -1.2810
128 S H -1.0059
129 K H -1.2021
130 S H 0.0000
131 T H -0.7387
132 S H -0.8298
133 G H -0.8599
134 G H -0.9098
135 T H -0.6179
136 A H 0.0000
137 A H 0.0000
138 L H 0.0000
139 G H 0.0000
140 C H 0.0000
141 L H 0.0000
142 V H 0.0000
143 K H 0.0000
144 D H -0.3703
145 Y H 0.0000
146 F H 0.0000
147 P H 0.0000
148 E H -0.4690
149 P H -0.7715
150 V H -0.6871
151 T H -0.5453
152 V H -0.3001
153 S H -0.3285
154 W H 0.0000
155 N H -0.7195
156 S H -0.5904
157 G H -0.3708
158 A H -0.1855
159 L H 0.0539
160 T H -0.1155
161 S H -0.1349
162 G H -0.1144
163 V H 0.2351
164 H H -0.2592
165 T H 0.0424
166 F H 0.0000
167 P H -0.2895
168 A H 0.1299
169 V H 0.4325
170 L H 1.2874
171 Q H 0.3306
172 S H -0.1640
173 S H -0.1449
174 G H 0.1021
175 L H 0.1621
176 Y H 0.4163
177 S H 0.0000
178 L H 0.0000
179 S H 0.0000
180 S H 0.0000
181 V H 0.0000
182 V H 0.0000
183 T H -0.0873
184 V H 0.0000
185 P H -0.5412
186 S H -0.5991
187 S H -0.6078
188 S H -0.5845
189 L H -0.7435
190 G H -0.9100
191 T H -0.7100
192 Q H -1.1191
193 T H -1.1432
194 Y H 0.0000
195 I H -1.2478
196 C H 0.0000
197 N H -1.4149
198 V H 0.0000
199 N H -1.7732
200 H H 0.0000
201 K H -2.7639
202 P H -1.5623
203 S H -1.8226
204 N H -2.6012
205 T H -2.0336
206 K H -2.5675
207 V H -1.3385
208 D H -2.4923
209 K H -2.0527
210 R H -2.7107
211 V H 0.0000
212 E H -2.9046
213 P H -2.1629
214 K H -2.3990
215 S H -1.3547
2 I L 1.0193
3 Q L -0.4983
4 M L 0.0000
5 T L -0.7441
6 Q L 0.0000
7 S L -0.4730
8 P L -0.5238
9 S L -0.7133
10 S L -0.7369
11 L L -0.5229
12 S L -0.7731
13 A L 0.0000
14 S L -0.8741
15 V L -0.0311
16 G L -0.7146
17 D L -1.7292
18 R L -2.2354
19 V L 0.0000
20 T L -0.6315
21 I L 0.0000
22 T L -0.7118
23 C L 0.0000
24 Q L -2.1306
25 A L 0.0000
26 S L -1.3208
27 Q L -2.1227
28 D L -2.5234
29 I L -0.6291
30 S L -0.9128
31 N L -1.6264
32 Y L -0.3751
33 L L 0.0000
34 N L 0.0000
35 W L 0.0000
36 Y L 0.0000
37 Q L 0.0000
38 Q L -1.4775
39 K L -1.9016
40 P L -1.5790
41 G L -1.7786
42 K L -2.8062
43 A L -1.9689
44 P L 0.0000
45 K L -1.9187
46 L L 0.0000
47 L L 0.0000
48 I L 0.0000
49 Y L -0.1975
50 D L -0.8892
51 A L 0.0000
52 S L -0.7452
53 N L -0.9269
54 L L -0.2452
55 E L -0.6081
56 T L -0.4132
57 G L -0.5291
58 V L 0.0000
59 P L -0.4246
60 S L -0.4509
61 R L -0.7087
62 F L 0.0000
63 S L -0.4492
64 G L -0.4730
65 S L -0.8780
66 G L -1.3167
67 S L -1.6305
68 G L -1.8412
69 T L -2.3183
70 D L -2.7377
71 F L 0.0000
72 T L -0.7347
73 F L 0.0000
74 T L -0.6009
75 I L 0.0000
76 S L -1.2807
77 S L -1.0750
78 L L 0.0000
79 Q L -0.7632
80 P L -1.3141
81 E L -1.8864
82 D L 0.0000
83 I L -1.0056
84 A L 0.0000
85 T L -0.8474
86 Y L 0.0000
87 Y L 0.0000
88 C L 0.0000
89 Q L 0.0000
90 Q L 0.0000
91 Y L 0.2515
92 E L -0.2144
93 F L 0.5096
94 I L 0.0584
95 G L 0.0000
96 P L -0.7812
97 G L 0.0000
98 T L 0.0000
99 K L -1.5055
100 V L 0.0000
101 D L 0.0000
102 I L 0.0000
103 K L -1.6488
104 R L -1.0327
105 T L -0.1726
106 V L 0.4352
107 A L 0.1110
108 A L -0.0726
109 P L 0.0000
110 S L -0.1204
111 V L -0.1649
112 F L 0.0000
113 I L 0.0000
114 F L 0.0000
115 P L -0.8420
116 P L -0.6796
117 S L -1.5745
118 D L -2.6314
119 E L -2.2510
120 Q L 0.0000
121 L L -1.7935
122 K L -2.5866
123 S L -1.6037
124 G L -1.4391
125 T L -1.1501
126 A L 0.0000
127 S L 0.0000
128 V L 0.0000
129 V L 0.0000
130 C L 0.0000
131 L L 0.0000
132 L L 0.0000
133 N L 0.0000
134 N L -0.6924
135 F L 0.0000
136 Y L 0.0000
137 P L -1.2362
138 R L -1.6864
139 E L -2.5570
140 A L -1.8786
141 K L -1.9842
142 V L -0.9411
143 Q L -0.4320
144 W L 0.0000
145 K L -0.6689
146 V L 0.0000
147 D L -2.1910
148 N L -1.6609
149 A L -0.3086
150 L L 0.6885
151 Q L -0.1046
152 S L -0.4873
153 G L -0.9167
154 N L -0.8465
155 S L -1.1504
156 Q L -1.4616
157 E L -1.9033
158 S L -0.8697
159 V L -0.2720
160 T L -0.8697
161 E L -1.9974
162 Q L 0.0000
163 D L -2.0510
164 S L -2.0575
165 K L -2.2548
166 D L -1.6764
167 S L -1.7923
168 T L 0.0000
169 Y L 0.0000
170 S L 0.0000
171 L L 0.0000
172 S L 0.0000
173 S L 0.0000
174 T L -0.7014
175 L L 0.0000
176 T L -0.4569
177 L L -0.7639
178 S L -1.2218
179 K L -2.1961
180 A L -2.1272
181 D L -3.1700
182 Y L 0.0000
183 E L -3.9752
184 K L -3.9471
185 H L -3.5819
186 K L -3.4805
187 V L -2.0391
188 Y L 0.0000
189 A L 0.0000
190 C L 0.0000
191 E L -0.4717
192 V L 0.0000
193 T L -1.0928
194 H L 0.0000
195 Q L -1.5725
196 G L -0.4179
197 L L -0.2612
198 S L -0.4670
199 S L -0.4567
200 P L -0.5771
201 V L 0.0510
202 T L -0.3464
203 K L -0.7012
204 S L -0.7119
205 F L -1.0818
206 N L -2.1278
207 R L -2.3783
208 G L -1.4767
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Laboratory of Theory of Biopolymers 2018