| Chain sequence(s) |
B: LAAFKELKERLEKRKKIMLEMAELASPEVVKKAEEFGKKLDERFEKIVAA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:51)
[INFO] Main: Simulation completed successfully. (00:02:51)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | B | 1.3514 | |
| 2 | A | B | 0.1339 | |
| 3 | A | B | 0.0748 | |
| 4 | F | B | -0.3910 | |
| 5 | K | B | -2.2774 | |
| 6 | E | B | -2.7654 | |
| 7 | L | B | -1.6699 | |
| 8 | K | B | -3.6009 | |
| 9 | E | B | -4.6806 | |
| 10 | R | B | -4.5207 | |
| 11 | L | B | -3.7391 | |
| 12 | E | B | -4.4751 | |
| 13 | K | B | -4.5986 | |
| 14 | R | B | -4.1799 | |
| 15 | K | B | -3.5539 | |
| 16 | K | B | -3.2131 | |
| 17 | I | B | -1.2917 | |
| 18 | M | B | -1.0458 | |
| 19 | L | B | -1.4279 | |
| 20 | E | B | -1.1415 | |
| 21 | M | B | 0.6090 | |
| 22 | A | B | 0.0000 | |
| 23 | E | B | -1.2639 | |
| 24 | L | B | 0.8542 | |
| 25 | A | B | 0.2000 | |
| 26 | S | B | -0.8633 | |
| 27 | P | B | -1.7470 | |
| 28 | E | B | -2.9892 | |
| 29 | V | B | -1.7802 | |
| 30 | V | B | -2.3741 | |
| 31 | K | B | -3.9696 | |
| 32 | K | B | -3.6400 | |
| 33 | A | B | 0.0000 | |
| 34 | E | B | -4.2123 | |
| 35 | E | B | -3.9268 | |
| 36 | F | B | -1.9982 | |
| 37 | G | B | 0.0000 | |
| 38 | K | B | -4.2438 | |
| 39 | K | B | -4.0087 | |
| 40 | L | B | -3.1796 | |
| 41 | D | B | -4.1268 | |
| 42 | E | B | -4.5290 | |
| 43 | R | B | -4.3278 | |
| 44 | F | B | 0.0000 | |
| 45 | E | B | -3.6642 | |
| 46 | K | B | -3.1188 | |
| 47 | I | B | -1.0839 | |
| 48 | V | B | -0.4692 | |
| 49 | A | B | -0.7524 | |
| 50 | A | B | -0.2288 |