Chain sequence(s) |
A: GALGNIVGAGKKIVCGLSGLC
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:09) [INFO] Main: Simulation completed successfully. (00:00:09) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | G | A | -0.1344 | |
2 | A | A | 0.6456 | |
3 | L | A | 1.7672 | |
4 | G | A | 0.4680 | |
5 | N | A | -0.0370 | |
6 | I | A | 1.7615 | |
7 | V | A | 1.2491 | |
8 | G | A | -0.1236 | |
9 | A | A | 0.2894 | |
10 | G | A | 0.2083 | |
11 | K | A | -0.8549 | |
12 | K | A | -0.5169 | |
13 | I | A | 1.8826 | |
14 | V | A | 2.2358 | |
15 | C | A | 1.3485 | |
16 | G | A | 1.3227 | |
17 | L | A | 2.2918 | |
18 | S | A | 1.5069 | |
19 | G | A | 0.8881 | |
20 | L | A | 2.0146 | |
21 | C | A | 1.6659 |