| Chain sequence(s) |
A: GALGNIVGAGKKIVCGLSGLC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:09)
[INFO] Main: Simulation completed successfully. (00:00:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.1344 | |
| 2 | A | A | 0.6456 | |
| 3 | L | A | 1.7672 | |
| 4 | G | A | 0.4680 | |
| 5 | N | A | -0.0370 | |
| 6 | I | A | 1.7615 | |
| 7 | V | A | 1.2491 | |
| 8 | G | A | -0.1236 | |
| 9 | A | A | 0.2894 | |
| 10 | G | A | 0.2083 | |
| 11 | K | A | -0.8549 | |
| 12 | K | A | -0.5169 | |
| 13 | I | A | 1.8826 | |
| 14 | V | A | 2.2358 | |
| 15 | C | A | 1.3485 | |
| 16 | G | A | 1.3227 | |
| 17 | L | A | 2.2918 | |
| 18 | S | A | 1.5069 | |
| 19 | G | A | 0.8881 | |
| 20 | L | A | 2.0146 | |
| 21 | C | A | 1.6659 |