| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDAPAVTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGRLLWNSLSKPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:13)
[INFO] Main: Simulation completed successfully. (00:01:14)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.6207 | |
| 2 | S | A | 0.0612 | |
| 3 | D | A | -0.4351 | |
| 4 | V | A | -0.9631 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -3.2845 | |
| 7 | D | A | -3.4404 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -2.1396 | |
| 10 | V | A | 0.0823 | |
| 11 | V | A | 1.5228 | |
| 12 | A | A | 0.8819 | |
| 13 | A | A | 0.2903 | |
| 14 | T | A | -0.5431 | |
| 15 | P | A | -1.1444 | |
| 16 | T | A | -1.0037 | |
| 17 | S | A | -0.5399 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7173 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -1.1613 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -3.3012 | |
| 24 | A | A | -1.7047 | |
| 25 | P | A | 0.0000 | |
| 26 | A | A | 0.1161 | |
| 27 | V | A | 0.0473 | |
| 28 | T | A | -0.6520 | |
| 29 | V | A | -1.1266 | |
| 30 | R | A | -2.0994 | |
| 31 | Y | A | -0.8238 | |
| 32 | Y | A | 0.0000 | |
| 33 | R | A | -0.8940 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | 0.0000 | |
| 36 | Y | A | -0.4470 | |
| 37 | G | A | -0.7127 | |
| 38 | E | A | -1.5627 | |
| 39 | T | A | -1.2274 | |
| 40 | G | A | -1.2344 | |
| 41 | G | A | -1.3609 | |
| 42 | N | A | -1.5474 | |
| 43 | S | A | -0.9111 | |
| 44 | P | A | -0.4244 | |
| 45 | V | A | 0.2490 | |
| 46 | Q | A | -1.2084 | |
| 47 | E | A | -1.8827 | |
| 48 | F | A | -0.8330 | |
| 49 | T | A | -0.3688 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -1.1227 | |
| 52 | G | A | -1.3158 | |
| 53 | S | A | -1.3440 | |
| 54 | K | A | -2.0270 | |
| 55 | S | A | -1.5636 | |
| 56 | T | A | -0.7872 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2270 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.6621 | |
| 61 | G | A | -1.0275 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.3544 | |
| 64 | P | A | -1.6462 | |
| 65 | G | A | -1.4203 | |
| 66 | V | A | -1.4008 | |
| 67 | D | A | -2.0423 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.7316 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | -0.3825 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | -0.1388 | |
| 74 | A | A | 0.0000 | |
| 75 | V | A | 0.0000 | |
| 76 | T | A | 0.0000 | |
| 77 | G | A | -0.7852 | |
| 78 | R | A | -0.9115 | |
| 79 | L | A | 1.4408 | |
| 80 | L | A | 1.9533 | |
| 81 | W | A | 1.1703 | |
| 82 | N | A | -0.7105 | |
| 83 | S | A | -0.4569 | |
| 84 | L | A | 0.1793 | |
| 85 | S | A | 0.0000 | |
| 86 | K | A | -1.5108 | |
| 87 | P | A | -0.8488 | |
| 88 | I | A | -0.6226 | |
| 89 | S | A | -0.5150 | |
| 90 | I | A | -0.7345 | |
| 91 | N | A | -1.7045 | |
| 92 | Y | A | -1.4099 | |
| 93 | R | A | -2.4862 | |
| 94 | T | A | -1.4832 |